Literature DB >> 21798849

Gene-protein correlation in single cells.

Jaclyn J Renfrow1, Adrienne C Scheck, Neil S Dhawan, Paul J Lukac, Hannes Vogel, James P Chandler, Jeffrey J Raizer, Griffith R Harsh, Arnab Chakravarti, Markus Bredel.   

Abstract

We present a novel methodology combining traditional fluorescent in situ hybridization with an in situ protein detection technology called proximity ligation assay. This method has potential to perform a detailed analysis of the relationship between gene status and corresponding protein expression in cells and tissues. We demonstrate that the fluorescent in situ gene protein assay methodology is capable of resolving gene and protein patterns simultaneously on a cell-by-cell basis.

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Year:  2011        PMID: 21798849      PMCID: PMC3145472          DOI: 10.1093/neuonc/nor071

Source DB:  PubMed          Journal:  Neuro Oncol        ISSN: 1522-8517            Impact factor:   12.300


  14 in total

1.  Characterizing proteins and their interactions in cells and tissues using the in situ proximity ligation assay.

Authors:  Ola Söderberg; Karl-Johan Leuchowius; Mats Gullberg; Malin Jarvius; Irene Weibrecht; Lars-Gunnar Larsson; Ulf Landegren
Journal:  Methods       Date:  2008-07-11       Impact factor: 3.608

2.  Amplifications of EGFR gene and protein expression of EGFR, Her-2/neu, c-kit, and androgen receptor in phyllodes tumor of the prostate.

Authors:  Xiaoyan Wang; Timothy D Jones; Shaobo Zhang; John N Eble; David G Bostwick; Junqi Qian; Antonio Lopez-Beltran; Rodolfo Montironi; John J Harris; Liang Cheng
Journal:  Mod Pathol       Date:  2006-12-22       Impact factor: 7.842

3.  Significance of EGFR protein expression and gene amplification in non-small cell lung carcinoma.

Authors:  Sanja Dacic; Melina Flanagan; Kathleen Cieply; Suresh Ramalingam; James Luketich; Chandra Belani; Samuel A Yousem
Journal:  Am J Clin Pathol       Date:  2006-06       Impact factor: 2.493

4.  New pattern of EGFR amplification in glioblastoma and the relationship of gene copy number with gene expression profile.

Authors:  Concha Lopez-Gines; Rosario Gil-Benso; Ruben Ferrer-Luna; Rafael Benito; Eva Serna; Jose Gonzalez-Darder; Vicente Quilis; Daniel Monleon; Bernardo Celda; Miguel Cerdá-Nicolas
Journal:  Mod Pathol       Date:  2010-03-19       Impact factor: 7.842

5.  High-resolution genome-wide mapping of genetic alterations in human glial brain tumors.

Authors:  Markus Bredel; Claudia Bredel; Dejan Juric; Griffith R Harsh; Hannes Vogel; Lawrence D Recht; Branimir I Sikic
Journal:  Cancer Res       Date:  2005-05-15       Impact factor: 12.701

6.  Direct observation of individual endogenous protein complexes in situ by proximity ligation.

Authors:  Ola Söderberg; Mats Gullberg; Malin Jarvius; Karin Ridderstråle; Karl-Johan Leuchowius; Jonas Jarvius; Kenneth Wester; Per Hydbring; Fuad Bahram; Lars-Gunnar Larsson; Ulf Landegren
Journal:  Nat Methods       Date:  2006-10-29       Impact factor: 28.547

7.  HER-2 testing in breast cancer using parallel tissue-based methods.

Authors:  Hadi Yaziji; Lynn C Goldstein; Todd S Barry; Robert Werling; Harry Hwang; Georgiana K Ellis; Julie R Gralow; Robert B Livingston; Allen M Gown
Journal:  JAMA       Date:  2004-04-28       Impact factor: 56.272

8.  Epidermal growth factor receptor protein expression and gene amplification in small cell carcinoma of the urinary bladder.

Authors:  Xiaoyan Wang; Shaobo Zhang; Gregory T MacLennan; John N Eble; Antonio Lopez-Beltran; Ximing J Yang; Chong-Xian Pan; Honghong Zhou; Rodolfo Montironi; Liang Cheng
Journal:  Clin Cancer Res       Date:  2007-02-01       Impact factor: 12.531

9.  Monoclonal antibodies against EGFRvIII are tumor specific and react with breast and lung carcinomas and malignant gliomas.

Authors:  C J Wikstrand; L P Hale; S K Batra; M L Hill; P A Humphrey; S N Kurpad; R E McLendon; D Moscatello; C N Pegram; C J Reist
Journal:  Cancer Res       Date:  1995-07-15       Impact factor: 12.701

10.  Epidermal growth factor receptor in non-small-cell lung carcinomas: correlation between gene copy number and protein expression and impact on prognosis.

Authors:  Fred R Hirsch; Marileila Varella-Garcia; Paul A Bunn; Michael V Di Maria; Robert Veve; Roy M Bremmes; Anna E Barón; Chan Zeng; Wilbur A Franklin
Journal:  J Clin Oncol       Date:  2003-09-02       Impact factor: 44.544

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  1 in total

1.  Operation of the Atypical Canonical Bone Morphogenetic Protein Signaling Pathway During Early Human Odontogenesis.

Authors:  Xiaoxiao Hu; Chensheng Lin; Ningsheng Ruan; Zhen Huang; Yanding Zhang; Xuefeng Hu
Journal:  Front Physiol       Date:  2022-02-08       Impact factor: 4.566

  1 in total

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