Literature DB >> 21798175

Ribosomal genes in notothenioid fishes: Focus on the chromosomal organisation.

Eva Pisano1, Laura Ghigliotti.   

Abstract

This mini-review makes a survey and a summary of some major issues concerning the chromosomal organisation of ribosomal genes in fish genomes, by using Notothenioidei as the model. The increasing body of information, published during the last two decades on the chromosomal mapping of the two ribosomal genes classes (45S rDNA and 5S rDNA) in notothenioids, makes it possible to recognise the main evolutionary trends across the phylogeny of the group. As one of the major features, the rDNA clusters are organised in a single chromosomal locus in most of the species. This locus is located at different positions along the chromosomes in the basal groups (non-Antarctic Clade), whereas it maintains a strongly conserved location in the cold-adapted species (Antarctic Clade). Important structural changes, leading to the co-localisation of the two ribosomal gene classes, occurred early in the notothenioid phylogeny, perhaps in the common ancestor of the Eleginopidae and Nototheniidae. The cytogenetic evidences indicate that an increased amount of ribosomal genes, organised in two large chromosomal loci, is present in the giant Antarctic fish Dissostichus mawsoni. This gain in rRNA genes is an important genomic change, having possible implications for the fitness of this notothenioid fish that combines large size, pelagic lifestyle and cold-adaptation.

Entities:  

Year:  2009        PMID: 21798175     DOI: 10.1016/j.margen.2009.03.006

Source DB:  PubMed          Journal:  Mar Genomics        ISSN: 1874-7787            Impact factor:   1.710


  9 in total

1.  Evolutionary dynamics of 5S rDNA location in acridid grasshoppers and its relationship with H3 histone gene and 45S rDNA location.

Authors:  Diogo C Cabral-de-Mello; Josefa Cabrero; María Dolores López-León; Juan Pedro M Camacho
Journal:  Genetica       Date:  2011-07-14       Impact factor: 1.082

2.  Molecular cytogenetic analysis of the Appenine endemic cyprinid fish Squalius lucumonis and three other Italian leuciscines using chromosome banding and FISH with rDNA probes.

Authors:  Anna Rita Rossi; Valentina Milana; Anne Kathrin Hett; Lorenzo Tancioni
Journal:  Genetica       Date:  2012-12-13       Impact factor: 1.082

3.  Physical Mapping of Repeated Sequences on Fish Chromosomes by Fluorescence In Situ Hybridization (FISH).

Authors:  Laura Ghigliotti; Juliette Auvinet; Eva Pisano
Journal:  Methods Mol Biol       Date:  2022

4.  Chromosomal organization of the 18S and 5S rRNAs and histone H3 genes in Scarabaeinae coleopterans: insights into the evolutionary dynamics of multigene families and heterochromatin.

Authors:  Diogo C Cabral-de-Mello; Sárah G Oliveira; Rita C de Moura; Cesar Martins
Journal:  BMC Genet       Date:  2011-10-15       Impact factor: 2.797

5.  Genetic characterization of Plectorhinchus mediterraneus yields important clues about genome organization and evolution of multigene families.

Authors:  Manuel A Merlo; Tiziana Pacchiarini; Silvia Portela-Bens; Ismael Cross; Manuel Manchado; Laureana Rebordinos
Journal:  BMC Genet       Date:  2012-04-30       Impact factor: 2.797

6.  Laser microdissection-based analysis of the Y sex chromosome of the Antarctic fish Chionodracohamatus (Notothenioidei, Channichthyidae).

Authors:  Ennio Cocca; Agnese Petraccioli; Maria Alessandra Morescalchi; Gaetano Odierna; Teresa Capriglione
Journal:  Comp Cytogenet       Date:  2015-02-05       Impact factor: 1.800

7.  Chromosomal organization of four classes of repetitive DNA sequences in killifish Orestias ascotanensis Parenti, 1984 (Cyprinodontiformes, Cyprinodontidae).

Authors:  Cristian Araya-Jaime; Natalia Lam; Irma Vila Pinto; Marco A Méndez; Patricia Iturra
Journal:  Comp Cytogenet       Date:  2017-07-25       Impact factor: 1.800

8.  Chromosome Distribution of Highly Conserved Tandemly Arranged Repetitive DNAs in the Siberian Sturgeon (Acipenser baerii).

Authors:  Larisa S Biltueva; Dmitry Yu Prokopov; Svetlana A Romanenko; Elena A Interesova; Manfred Schartl; Vladimir A Trifonov
Journal:  Genes (Basel)       Date:  2020-11-20       Impact factor: 4.096

9.  Karyotype differentiation in 19 species of river loach fishes (Nemacheilidae, Teleostei): extensive variability associated with rDNA and heterochromatin distribution and its phylogenetic and ecological interpretation.

Authors:  Alexandr Sember; Jörg Bohlen; Vendula Šlechtová; Marie Altmanová; Radka Symonová; Petr Ráb
Journal:  BMC Evol Biol       Date:  2015-11-14       Impact factor: 3.260

  9 in total

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