Literature DB >> 21793598

Realization and properties of biochemical-computing biocatalytic XOR gate based on enzyme inhibition by a substrate.

Jan Halámek1, Vera Bocharova, Mary A Arugula, Guinevere Strack, Vladimir Privman, Evgeny Katz.   

Abstract

We consider a realization of the XOR logic gate in a process biocatalyzed by an enzyme which can be inhibited by a substrate when the latter is inputted at large enough concentrations. A model is developed for describing such systems in an approach suitable for evaluation of the analog noise amplification properties of the gate. The obtained data are fitted for gate quality evaluation within the developed model, and we discuss aspects of devising XOR gates for functioning in "biocomputing" systems utilizing biomolecules for information processing.

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Year:  2011        PMID: 21793598     DOI: 10.1021/jp2041372

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  2 in total

1.  Bridging the Two Worlds: A Universal Interface between Enzymatic and DNA Computing Systems.

Authors:  Shay Mailloux; Yulia V Gerasimova; Nataliia Guz; Dmitry M Kolpashchikov; Evgeny Katz
Journal:  Angew Chem Int Ed Engl       Date:  2015-04-09       Impact factor: 15.336

2.  Design of synthetic biological logic circuits based on evolutionary algorithm.

Authors:  Chia-Hua Chuang; Chun-Liang Lin; Yen-Chang Chang; Tanagorn Jennawasin; Po-Kuei Chen
Journal:  IET Syst Biol       Date:  2013-08-01       Impact factor: 1.615

  2 in total

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