Literature DB >> 21784982

Self-recognition mechanism of MamA, a magnetosome-associated TPR-containing protein, promotes complex assembly.

Natalie Zeytuni1, Ertan Ozyamak, Kfir Ben-Harush, Geula Davidov, Maxim Levin, Yair Gat, Tal Moyal, Ashraf Brik, Arash Komeili, Raz Zarivach.   

Abstract

The magnetosome, a biomineralizing organelle within magnetotactic bacteria, allows their navigation along geomagnetic fields. Magnetosomes are membrane-bound compartments containing magnetic nanoparticles and organized into a chain within the cell, the assembly and biomineralization of magnetosomes are controlled by magnetosome-associated proteins. Here, we describe the crystal structures of the magnetosome-associated protein, MamA, from Magnetospirillum magneticum AMB-1 and Magnetospirillum gryphiswaldense MSR-1. MamA folds as a sequential tetra-trico-peptide repeat (TPR) protein with a unique hook-like shape. Analysis of the MamA structures indicates two distinct domains that can undergo conformational changes. Furthermore, structural analysis of seven crystal forms verified that the core of MamA is not affected by crystallization conditions and identified three protein-protein interaction sites, namely a concave site, a convex site, and a putative TPR repeat. Additionally, relying on transmission electron microscopy and size exclusion chromatography, we show that highly stable complexes form upon MamA homooligomerization. Disruption of the MamA putative TPR motif or N-terminal domain led to protein mislocalization in vivo and prevented MamA oligomerization in vitro. We, therefore, propose that MamA self-assembles through its putative TPR motif and its concave site to create a large homooligomeric scaffold which can interact with other magnetosome-associated proteins via the MamA convex site. We discuss the structural basis for TPR homooligomerization that allows the proper function of a prokaryotic organelle.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21784982      PMCID: PMC3158213          DOI: 10.1073/pnas.1103367108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  44 in total

1.  Expression and characterization of a magnetosome-associated protein, TPR-containing MAM22, in Escherichia coli.

Authors:  Y Okuda; Y Fukumori
Journal:  FEBS Lett       Date:  2001-03-02       Impact factor: 4.124

2.  Electrostatics of nanosystems: application to microtubules and the ribosome.

Authors:  N A Baker; D Sept; S Joseph; M J Holst; J A McCammon
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-21       Impact factor: 11.205

Review 3.  Molecular analysis of a subcellular compartment: the magnetosome membrane in Magnetospirillum gryphiswaldense.

Authors:  Dirk Schüler
Journal:  Arch Microbiol       Date:  2003-12-11       Impact factor: 2.552

Review 4.  Cell biology of prokaryotic organelles.

Authors:  Dorothee Murat; Meghan Byrne; Arash Komeili
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-08-25       Impact factor: 10.005

5.  Structure and stability of designed TPR protein superhelices: unusual crystal packing and implications for natural TPR proteins.

Authors:  Tommi Kajander; Aitziber L Cortajarena; Simon Mochrie; Lynne Regan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-06-15

6.  Key residues in Mycobacterium tuberculosis protein kinase G play a role in regulating kinase activity and survival in the host.

Authors:  Divya Tiwari; Rajnish Kumar Singh; Kasturi Goswami; Sunil Kumar Verma; Balaji Prakash; Vinay Kumar Nandicoori
Journal:  J Biol Chem       Date:  2009-07-28       Impact factor: 5.157

7.  Structural insights into the recognition of peroxisomal targeting signal 1 by Trypanosoma brucei peroxin 5.

Authors:  Parthasarathy Sampathkumar; Claudia Roach; Paul A M Michels; Wim G J Hol
Journal:  J Mol Biol       Date:  2008-06-21       Impact factor: 5.469

8.  Biochemical and proteomic analysis of the magnetosome membrane in Magnetospirillum gryphiswaldense.

Authors:  Karen Grünberg; Eva-Christina Müller; Albrecht Otto; Regina Reszka; Dietmar Linder; Michael Kube; Richard Reinhardt; Dirk Schüler
Journal:  Appl Environ Microbiol       Date:  2004-02       Impact factor: 4.792

Review 9.  Protein secretion and outer membrane assembly in Alphaproteobacteria.

Authors:  Xenia Gatsos; Andrew J Perry; Khatira Anwari; Pavel Dolezal; P Peter Wolynec; Vladimir A Likić; Anthony W Purcell; Susan K Buchanan; Trevor Lithgow
Journal:  FEMS Microbiol Rev       Date:  2008-08-28       Impact factor: 16.408

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

View more
  38 in total

Review 1.  Biogenesis and subcellular organization of the magnetosome organelles of magnetotactic bacteria.

Authors:  Shannon E Greene; Arash Komeili
Journal:  Curr Opin Cell Biol       Date:  2012-06-20       Impact factor: 8.382

Review 2.  From invagination to navigation: The story of magnetosome-associated proteins in magnetotactic bacteria.

Authors:  Shiran Barber-Zucker; Noa Keren-Khadmy; Raz Zarivach
Journal:  Protein Sci       Date:  2015-11-03       Impact factor: 6.725

Review 3.  Ecology, diversity, and evolution of magnetotactic bacteria.

Authors:  Christopher T Lefèvre; Dennis A Bazylinski
Journal:  Microbiol Mol Biol Rev       Date:  2013-09       Impact factor: 11.056

Review 4.  Tetratricopeptide repeat motifs in the world of bacterial pathogens: role in virulence mechanisms.

Authors:  Lukas Cerveny; Adela Straskova; Vera Dankova; Anetta Hartlova; Martina Ceckova; Frantisek Staud; Jiri Stulik
Journal:  Infect Immun       Date:  2012-12-21       Impact factor: 3.441

5.  Screening for the interacting partners of the proteins MamK & MamJ by two-hybrid genomic DNA library of Magnetospirillum magneticum AMB-1.

Authors:  Weidong Pan; Chunlan Xie; Jing Lv
Journal:  Curr Microbiol       Date:  2012-03-01       Impact factor: 2.188

6.  A tailored galK counterselection system for efficient markerless gene deletion and chromosomal tagging in Magnetospirillum gryphiswaldense.

Authors:  Oliver Raschdorf; Jürgen M Plitzko; Dirk Schüler; Frank D Müller
Journal:  Appl Environ Microbiol       Date:  2014-05-09       Impact factor: 4.792

Review 7.  Magnetosome biogenesis in magnetotactic bacteria.

Authors:  René Uebe; Dirk Schüler
Journal:  Nat Rev Microbiol       Date:  2016-09-13       Impact factor: 60.633

8.  Comparative Subcellular Localization Analysis of Magnetosome Proteins Reveals a Unique Localization Behavior of Mms6 Protein onto Magnetite Crystals.

Authors:  Atsushi Arakaki; Daiki Kikuchi; Masayoshi Tanaka; Ayana Yamagishi; Takuto Yoda; Tadashi Matsunaga
Journal:  J Bacteriol       Date:  2016-09-22       Impact factor: 3.490

9.  Genetic dissection of the mamAB and mms6 operons reveals a gene set essential for magnetosome biogenesis in Magnetospirillum gryphiswaldense.

Authors:  Anna Lohße; Sarah Borg; Oliver Raschdorf; Isabel Kolinko; Eva Tompa; Mihály Pósfai; Damien Faivre; Jens Baumgartner; Dirk Schüler
Journal:  J Bacteriol       Date:  2014-05-09       Impact factor: 3.490

10.  Hybrid Sterility in Rice (Oryza sativa L.) Involves the Tetratricopeptide Repeat Domain Containing Protein.

Authors:  Yang Yu; Zhigang Zhao; Yanrong Shi; Hua Tian; Linglong Liu; Xiaofeng Bian; Yang Xu; Xiaoming Zheng; Lu Gan; Yumin Shen; Chaolong Wang; Xiaowen Yu; Chunming Wang; Xin Zhang; Xiuping Guo; Jiulin Wang; Hiroshi Ikehashi; Ling Jiang; Jianmin Wan
Journal:  Genetics       Date:  2016-05-06       Impact factor: 4.562

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.