Literature DB >> 21781261

The genetics of common variation affecting platelet development, function and pharmaceutical targeting.

A D Johnson1.   

Abstract

Common variant effects on human platelet function and response to anti-platelet treatment have traditionally been studied using candidate gene approaches involving a limited number of variants and genes. These studies have often been undertaken in clinically defined cohorts. More recently, studies have applied genome-wide scans in larger population samples than prior candidate studies, in some cases scanning relatively healthy individuals. These studies demonstrate synergy with some prior candidate gene findings (e.g., GP6, ADRA2A) but also uncover novel loci involved in platelet function. Here, I summarise findings on common genetic variation influencing platelet development, function and therapeutics. Taken together, candidate gene and genome-wide studies begin to account for common variation in platelet function and provide information that may ultimately be useful in pharmacogenetic applications in the clinic. More than 50 loci have been identified with consistent associations with platelet phenotypes in ≥ 2 populations. Several variants are under further study in clinical trials relating to anti-platelet therapies. In order to have useful clinical applications, variants must have large effects on a modifiable outcome. Regardless of clinical applications, studies of common genetic influences, even of small effect, offer additional insights into platelet biology including the importance of intracellular signalling and novel receptors. Understanding of common platelet-related genetics remains behind parallel fields (e.g., lipids, blood pressure) due to challenges in phenotype ascertainment. Further work is necessary to discover and characterise loci for platelet function, and to assess whether these loci contribute to disease aetiologies or response to therapeutics.
© 2011 International Society on Thrombosis and Haemostasis.

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Year:  2011        PMID: 21781261      PMCID: PMC3151008          DOI: 10.1111/j.1538-7836.2011.04359.x

Source DB:  PubMed          Journal:  J Thromb Haemost        ISSN: 1538-7836            Impact factor:   5.824


  111 in total

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Authors:  Eric A Severson; Winston Y Lee; Christopher T Capaldo; Asma Nusrat; Charles A Parkos
Journal:  Mol Biol Cell       Date:  2009-01-28       Impact factor: 4.138

2.  Common susceptibility alleles are unlikely to contribute as strongly as the FV and ABO loci to VTE risk: results from a GWAS approach.

Authors:  David-Alexandre Trégouët; Simon Heath; Noémie Saut; Christine Biron-Andreani; Jean-François Schved; Gilles Pernod; Pilar Galan; Ludovic Drouet; Diana Zelenika; Irène Juhan-Vague; Marie-Christine Alessi; Laurence Tiret; Mark Lathrop; Joseph Emmerich; Pierre-Emmanuel Morange
Journal:  Blood       Date:  2009-03-10       Impact factor: 22.113

3.  Association of cytochrome P450 2C19 genotype with the antiplatelet effect and clinical efficacy of clopidogrel therapy.

Authors:  Alan R Shuldiner; Jeffrey R O'Connell; Kevin P Bliden; Amish Gandhi; Kathleen Ryan; Richard B Horenstein; Coleen M Damcott; Ruth Pakyz; Udaya S Tantry; Quince Gibson; Toni I Pollin; Wendy Post; Afshin Parsa; Braxton D Mitchell; Nauder Faraday; William Herzog; Paul A Gurbel
Journal:  JAMA       Date:  2009-08-26       Impact factor: 56.272

4.  A functional genomics approach reveals novel quantitative trait loci associated with platelet signaling pathways.

Authors:  Chris I Jones; Sarah Bray; Stephen F Garner; Jonathan Stephens; Bernard de Bono; Will G J Angenent; David Bentley; Philippa Burns; Alison Coffey; Panos Deloukas; Mark Earthrowl; Richard W Farndale; Marc F Hoylaerts; Kerstin Koch; Angela Rankin; Catherine M Rice; Jane Rogers; Nilesh J Samani; Michael Steward; Adam Walker; Nicholas A Watkins; Jan-Willem Akkerman; Frank Dudbridge; Alison H Goodall; Willem H Ouwehand
Journal:  Blood       Date:  2009-05-08       Impact factor: 22.113

5.  Quantitative trait loci for porcine white blood cells and platelet-related traits in a White Duroc x Erhualian F resource population.

Authors:  S Yang; J Ren; X Yan; X Huang; Z Zou; Z Zhang; B Yang; L Huang
Journal:  Anim Genet       Date:  2009-02-10       Impact factor: 3.169

6.  Role of sialic acid for platelet life span: exposure of beta-galactose results in the rapid clearance of platelets from the circulation by asialoglycoprotein receptor-expressing liver macrophages and hepatocytes.

Authors:  Anne Louise Sørensen; Viktoria Rumjantseva; Sara Nayeb-Hashemi; Henrik Clausen; John H Hartwig; Hans H Wandall; Karin M Hoffmeister
Journal:  Blood       Date:  2009-06-11       Impact factor: 22.113

7.  Rap1b is critical for glycoprotein VI-mediated but not ADP receptor-mediated alpha2beta1 activation.

Authors:  Z Wang; S P Holly; M K Larson; J Liu; W Yuan; M Chrzanowska-Wodnicka; G C White; L V Parise
Journal:  J Thromb Haemost       Date:  2009-01-17       Impact factor: 5.824

8.  Human platelets as a substrate source for the in vitro amplification of the abnormal prion protein (PrP) associated with variant Creutzfeldt-Jakob disease.

Authors:  Michael Jones; Alexander H Peden; Helen Yull; Darren Wight; Matthew T Bishop; Chris V Prowse; Marc L Turner; James W Ironside; Ian R MacGregor; Mark W Head
Journal:  Transfusion       Date:  2008-10-29       Impact factor: 3.157

9.  A novel variant on chromosome 7q22.3 associated with mean platelet volume, counts, and function.

Authors:  Nicole Soranzo; Augusto Rendon; Christian Gieger; Chris I Jones; Nicholas A Watkins; Stephan Menzel; Angela Döring; Jonathan Stephens; Holger Prokisch; Wendy Erber; Simon C Potter; Sarah L Bray; Philippa Burns; Jennifer Jolley; Mario Falchi; Brigitte Kühnel; Jeanette Erdmann; Heribert Schunkert; Nilesh J Samani; Thomas Illig; Stephen F Garner; Angela Rankin; Christa Meisinger; John R Bradley; Swee Lay Thein; Alison H Goodall; Tim D Spector; Panos Deloukas; Willem H Ouwehand
Journal:  Blood       Date:  2009-02-12       Impact factor: 22.113

10.  A HaemAtlas: characterizing gene expression in differentiated human blood cells.

Authors:  Nicholas A Watkins; Arief Gusnanto; Bernard de Bono; Subhajyoti De; Diego Miranda-Saavedra; Debbie L Hardie; Will G J Angenent; Antony P Attwood; Peter D Ellis; Wendy Erber; Nicola S Foad; Stephen F Garner; Clare M Isacke; Jennifer Jolley; Kerstin Koch; Iain C Macaulay; Sarah L Morley; Augusto Rendon; Kate M Rice; Niall Taylor; Daphne C Thijssen-Timmer; Marloes R Tijssen; C Ellen van der Schoot; Lorenz Wernisch; Thilo Winzer; Frank Dudbridge; Christopher D Buckley; Cordelia F Langford; Sarah Teichmann; Berthold Göttgens; Willem H Ouwehand
Journal:  Blood       Date:  2009-02-19       Impact factor: 22.113

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  15 in total

1.  A genome- and phenome-wide association study to identify genetic variants influencing platelet count and volume and their pleiotropic effects.

Authors:  Khader Shameer; Joshua C Denny; Keyue Ding; Hayan Jouni; David R Crosslin; Mariza de Andrade; Christopher G Chute; Peggy Peissig; Jennifer A Pacheco; Rongling Li; Lisa Bastarache; Abel N Kho; Marylyn D Ritchie; Daniel R Masys; Rex L Chisholm; Eric B Larson; Catherine A McCarty; Dan M Roden; Gail P Jarvik; Iftikhar J Kullo
Journal:  Hum Genet       Date:  2013-09-12       Impact factor: 4.132

Review 2.  Genetic sequence analysis of inherited bleeding diseases.

Authors:  Flora Peyvandi; Tom Kunicki; David Lillicrap
Journal:  Blood       Date:  2013-10-11       Impact factor: 22.113

3.  Replication and hematological characterization of human platelet reactivity genetic associations in men from the Caerphilly Prospective Study (CaPS).

Authors:  John D Eicher; Luting Xue; Yoav Ben-Shlomo; Andrew D Beswick; Andrew D Johnson
Journal:  J Thromb Thrombolysis       Date:  2016-02       Impact factor: 2.300

4.  Whole exome sequencing in the Framingham Heart Study identifies rare variation in HYAL2 that influences platelet aggregation.

Authors:  John D Eicher; Ming-Huei Chen; Achilleas N Pitsillides; Honghuang Lin; Narayanan Veeraraghavan; Jennifer A Brody; Ginger A Metcalf; Donna M Muzny; Richard A Gibbs; Diane M Becker; Lewis C Becker; Nauder Faraday; Rasika A Mathias; Lisa R Yanek; Eric Boerwinkle; L Adrienne Cupples; Andrew D Johnson
Journal:  Thromb Haemost       Date:  2017-03-16       Impact factor: 5.249

5.  Cardiovascular correlates of platelet count and volume in the Framingham Heart Study.

Authors:  Arielle Sloan; Philimon Gona; Andrew D Johnson
Journal:  Ann Epidemiol       Date:  2015-01-31       Impact factor: 3.797

Review 6.  The genetics of platelet count and volume in humans.

Authors:  John D Eicher; Guillaume Lettre; Andrew D Johnson
Journal:  Platelets       Date:  2017-06-26       Impact factor: 3.862

7.  Targeted deep sequencing of the PEAR1 locus for platelet aggregation in European and African American families.

Authors:  Ali R Keramati; Lisa R Yanek; Kruthika Iyer; Margaret A Taub; Ingo Ruczinski; Diane M Becker; Lewis C Becker; Nauder Faraday; Rasika A Mathias
Journal:  Platelets       Date:  2018-03-19       Impact factor: 3.862

8.  Characterization of the platelet transcriptome by RNA sequencing in patients with acute myocardial infarction.

Authors:  John D Eicher; Yoshiyuki Wakabayashi; Olga Vitseva; Nada Esa; Yanqin Yang; Jun Zhu; Jane E Freedman; David D McManus; Andrew D Johnson
Journal:  Platelets       Date:  2015-09-14       Impact factor: 3.862

9.  Mean platelet volume and its genetic variants relate to stroke severity and 1-year mortality.

Authors:  Małgorzata M Miller; Nils Henninger; Agnieszka Słowik
Journal:  Neurology       Date:  2020-06-23       Impact factor: 9.910

10.  Genome sequencing unveils a regulatory landscape of platelet reactivity.

Authors:  Ali R Keramati; Ming-Huei Chen; Benjamin A T Rodriguez; Lisa R Yanek; Arunoday Bhan; Brady J Gaynor; Kathleen Ryan; Jennifer A Brody; Xue Zhong; Qiang Wei; Kai Kammers; Kanika Kanchan; Kruthika Iyer; Madeline H Kowalski; Achilleas N Pitsillides; L Adrienne Cupples; Bingshan Li; Thorsten M Schlaeger; Alan R Shuldiner; Jeffrey R O'Connell; Ingo Ruczinski; Braxton D Mitchell; Nauder Faraday; Margaret A Taub; Lewis C Becker; Joshua P Lewis; Rasika A Mathias; Andrew D Johnson
Journal:  Nat Commun       Date:  2021-06-15       Impact factor: 14.919

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