Literature DB >> 21766409

A crystal structure of a model of the repeating r(CGG) transcript found in fragile X syndrome.

Amit Kumar1, Pengfei Fang, Hajeung Park, Min Guo, Kendall W Nettles, Matthew D Disney.   

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Year:  2011        PMID： 21766409      PMCID： PMC3379549          DOI： 10.1002/cbic.201100337

Source DB:  PubMed          Journal:  Chembiochem        ISSN： 1439-4227            Impact factor:   3.164


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  23 in total

1.  Database of non-canonical base pairs found in known RNA structures.

Authors:  U Nagaswamy; N Voss; Z Zhang; G E Fox
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures.

Authors:  Xiang-Jun Lu; Wilma K Olson
Journal:  Nucleic Acids Res       Date:  2003-09-01       Impact factor: 16.971

3.  NMR structures of r(GCAGGCGUGC)2 and determinants of stability for single guanosine-guanosine base pairs.

Authors:  M E Burkard; D H Turner
Journal:  Biochemistry       Date:  2000-09-26       Impact factor: 3.162

4.  NMR spectroscopy and molecular dynamics simulation of r(CCGCUGCGG)₂ reveal a dynamic UU internal loop found in myotonic dystrophy type 1.

Authors:  Raman Parkesh; Matthew Fountain; Matthew D Disney
Journal:  Biochemistry       Date:  2011-01-13       Impact factor: 3.162

Review 5.  Triplet repeat mutations in human disease.

Authors:  C T Caskey; A Pizzuti; Y H Fu; R G Fenwick; D L Nelson
Journal:  Science       Date:  1992-05-08       Impact factor: 47.728

6.  Sam68 sequestration and partial loss of function are associated with splicing alterations in FXTAS patients.

Authors:  Chantal Sellier; Frédérique Rau; Yilei Liu; Flora Tassone; Renate K Hukema; Renata Gattoni; Anne Schneider; Stéphane Richard; Rob Willemsen; David J Elliott; Paul J Hagerman; Nicolas Charlet-Berguerand
Journal:  EMBO J       Date:  2010-02-25       Impact factor: 11.598

7.  A'-form RNA helices are required for cytoplasmic mRNA transport in Drosophila.

Authors:  Simon L Bullock; Inbal Ringel; David Ish-Horowicz; Peter J Lukavsky
Journal:  Nat Struct Mol Biol       Date:  2010-05-16       Impact factor: 15.369

8.  RNA-mediated neurodegeneration caused by the fragile X premutation rCGG repeats in Drosophila.

Authors:  Peng Jin; Daniela C Zarnescu; Fuping Zhang; Christopher E Pearson; John C Lucchesi; Kevin Moses; Stephen T Warren
Journal:  Neuron       Date:  2003-08-28       Impact factor: 17.173

9.  Pentamidine reverses the splicing defects associated with myotonic dystrophy.

Authors:  M Bryan Warf; Masayuki Nakamori; Catherine M Matthys; Charles A Thornton; J Andrew Berglund
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-12       Impact factor: 11.205

10.  Atomic resolution structure of CAG RNA repeats: structural insights and implications for the trinucleotide repeat expansion diseases.

Authors:  Agnieszka Kiliszek; Ryszard Kierzek; Wlodzimierz J Krzyzosiak; Wojciech Rypniewski
Journal:  Nucleic Acids Res       Date:  2010-08-11       Impact factor: 16.971
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  18 in total

Review 1.  Molecular Pathophysiology of Fragile X-Associated Tremor/Ataxia Syndrome and Perspectives for Drug Development.

Authors:  Teresa Botta-Orfila; Gian Gaetano Tartaglia; Aubin Michalon
Journal:  Cerebellum       Date:  2016-10       Impact factor: 3.847

2.  Structure and Dynamics of DNA and RNA Double Helices of CAG and GAC Trinucleotide Repeats.

Authors:  Feng Pan; Viet Hoang Man; Christopher Roland; Celeste Sagui
Journal:  Biophys J       Date:  2017-07-11       Impact factor: 4.033

3.  Crystallographic and Computational Analyses of AUUCU Repeating RNA That Causes Spinocerebellar Ataxia Type 10 (SCA10).

Authors:  HaJeung Park; Àlex L González; Ilyas Yildirim; Tuan Tran; Jeremy R Lohman; Pengfei Fang; Min Guo; Matthew D Disney
Journal:  Biochemistry       Date:  2015-06-12       Impact factor: 3.162

Review 4.  Methods to enable the design of bioactive small molecules targeting RNA.

Authors:  Matthew D Disney; Ilyas Yildirim; Jessica L Childs-Disney
Journal:  Org Biomol Chem       Date:  2014-02-21       Impact factor: 3.876

5.  Atypical structures of GAA/TTC trinucleotide repeats underlying Friedreich's ataxia: DNA triplexes and RNA/DNA hybrids.

Authors:  Jiahui Zhang; Ashkan Fakharzadeh; Feng Pan; Christopher Roland; Celeste Sagui
Journal:  Nucleic Acids Res       Date:  2020-09-25       Impact factor: 16.971

6.  Structural and Dynamical Characterization of DNA and RNA Quadruplexes Obtained from the GGGGCC and GGGCCT Hexanucleotide Repeats Associated with C9FTD/ALS and SCA36 Diseases.

Authors:  Yuan Zhang; Christopher Roland; Celeste Sagui
Journal:  ACS Chem Neurosci       Date:  2018-01-12       Impact factor: 4.418

Review 7.  RNA Structures as Mediators of Neurological Diseases and as Drug Targets.

Authors:  Viachaslau Bernat; Matthew D Disney
Journal:  Neuron       Date:  2015-07-01       Impact factor: 17.173

8.  Structure and Dynamics of DNA and RNA Double Helices Obtained from the GGGGCC and CCCCGG Hexanucleotide Repeats That Are the Hallmark of C9FTD/ALS Diseases.

Authors:  Yuan Zhang; Christopher Roland; Celeste Sagui
Journal:  ACS Chem Neurosci       Date:  2016-12-19       Impact factor: 4.418

9.  A dynamic structural model of expanded RNA CAG repeats: a refined X-ray structure and computational investigations using molecular dynamics and umbrella sampling simulations.

Authors:  Ilyas Yildirim; HaJeung Park; Matthew D Disney; George C Schatz
Journal:  J Am Chem Soc       Date:  2013-02-26       Impact factor: 15.419

10.  Structure and Dynamics of DNA and RNA Double Helices Obtained from the CCG and GGC Trinucleotide Repeats.

Authors:  Feng Pan; Viet Hoang Man; Christopher Roland; Celeste Sagui
Journal:  J Phys Chem B       Date:  2018-04-17       Impact factor: 2.991
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