Literature DB >> 21763416

Influence of sex and genetic variability on expression of X-linked genes in human monocytes.

Raphaële Castagné1, Tanja Zeller, Maxime Rotival, Silke Szymczak, Vinh Truong, Arne Schillert, David-Alexandre Trégouët, Thomas Münzel, Andreas Ziegler, François Cambien, Stefan Blankenberg, Laurence Tiret.   

Abstract

In humans, the fraction of X-linked genes with higher expression in females has been estimated to be 5% from microarray studies, a proportion lower than the 25% of genes thought to escape X inactivation. We analyzed 715 X-linked transcripts in circulating monocytes from 1,467 subjects and found an excess of female-biased transcripts on the X compared to autosomes (9.4% vs 5.5%, p<2×10(-5)). Among the genes not previously known to escape inactivation, the most significant one was EFHC2 whose 20% of variability was explained by sex. We also investigated cis expression quantitative trait loci (eQTLs) by analyzing 15,703 X-linked SNPs. The frequency and magnitude of X-linked cis eQTLs were quite similar in males and females. Few genes exhibited a stronger genetic effect in females than in males (ARSD, DCX, POLA1 and ITM2A). These genes would deserve further investigation since they may contribute to sex pathophysiological differences. Copyright Â
© 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21763416     DOI: 10.1016/j.ygeno.2011.06.009

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  15 in total

1.  Y chromosome gene copy number and lack of autism phenotype in a male with an isodicentric Y chromosome and absent NLGN4Y expression.

Authors:  Judith L Ross; Luke Bloy; Timothy P L Roberts; Judith Miller; Chao Xing; Lawrence A Silverman; Andrew R Zinn
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2019-06-03       Impact factor: 3.568

2.  Gene-by-Sex Interactions in Mitochondrial Functions and Cardio-Metabolic Traits.

Authors:  Frode Norheim; Yehudit Hasin-Brumshtein; Laurent Vergnes; Karthickeyan Chella Krishnan; Calvin Pan; Marcus M Seldin; Simon T Hui; Margarete Mehrabian; Zhiqiang Zhou; Sonul Gupta; Brian W Parks; Axel Walch; Karen Reue; Susanna M Hofmann; Arthur P Arnold; Aldons J Lusis
Journal:  Cell Metab       Date:  2019-01-10       Impact factor: 27.287

3.  Behavioral phenotypes in males with XYY and possible role of increased NLGN4Y expression in autism features.

Authors:  J L Ross; N Tartaglia; D E Merry; M Dalva; A R Zinn
Journal:  Genes Brain Behav       Date:  2015-02-01       Impact factor: 3.449

4.  Overall and allele-specific expression of the SMC1A gene in female Cornelia de Lange syndrome patients and healthy controls.

Authors:  Ilaria Parenti; Davide Rovina; Maura Masciadri; Anna Cereda; Jacopo Azzollini; Chiara Picinelli; Giuseppe Limongelli; Palma Finelli; Angelo Selicorni; Silvia Russo; Cristina Gervasini; Lidia Larizza
Journal:  Epigenetics       Date:  2014-04-22       Impact factor: 4.528

5.  Human platelet microRNA-mRNA networks associated with age and gender revealed by integrated plateletomics.

Authors:  Lukas M Simon; Leonard C Edelstein; Srikanth Nagalla; Angela B Woodley; Edward S Chen; Xianguo Kong; Lin Ma; Paolo Fortina; Satya Kunapuli; Michael Holinstat; Steven E McKenzie; Jing-Fei Dong; Chad A Shaw; Paul F Bray
Journal:  Blood       Date:  2014-02-12       Impact factor: 22.113

Review 6.  Nonsense-mediated mRNA decay: inter-individual variability and human disease.

Authors:  Lam Son Nguyen; Miles F Wilkinson; Jozef Gecz
Journal:  Neurosci Biobehav Rev       Date:  2013-11-14       Impact factor: 8.989

7.  Comprehensive exploration of the effects of miRNA SNPs on monocyte gene expression.

Authors:  Nicolas Greliche; Tanja Zeller; Philipp S Wild; Maxime Rotival; Arne Schillert; Andreas Ziegler; Panos Deloukas; Jeanette Erdmann; Christian Hengstenberg; Willem H Ouwehand; Nilesh J Samani; Heribert Schunkert; Thomas Munzel; Karl J Lackner; François Cambien; Alison H Goodall; Laurence Tiret; Stefan Blankenberg; David-Alexandre Trégouët
Journal:  PLoS One       Date:  2012-09-21       Impact factor: 3.240

8.  Variation in the X-linked EFHC2 gene is associated with social cognitive abilities in males.

Authors:  Carla M Startin; Chiara Fiorentini; Michelle de Haan; David H Skuse
Journal:  PLoS One       Date:  2015-06-24       Impact factor: 3.240

9.  Genome-wide haplotype analysis of cis expression quantitative trait loci in monocytes.

Authors:  Sophie Garnier; Vinh Truong; Jessy Brocheton; Tanja Zeller; Maxime Rovital; Philipp S Wild; Andreas Ziegler; Thomas Munzel; Laurence Tiret; Stefan Blankenberg; Panos Deloukas; Jeannette Erdmann; Christian Hengstenberg; Nilesh J Samani; Heribert Schunkert; Willem H Ouwehand; Alison H Goodall; François Cambien; David-Alexandre Trégouët
Journal:  PLoS Genet       Date:  2013-01-31       Impact factor: 5.917

10.  Chromosome X-wide association study identifies Loci for fasting insulin and height and evidence for incomplete dosage compensation.

Authors:  Taru Tukiainen; Matti Pirinen; Antti-Pekka Sarin; Claes Ladenvall; Johannes Kettunen; Terho Lehtimäki; Marja-Liisa Lokki; Markus Perola; Juha Sinisalo; Efthymia Vlachopoulou; Johan G Eriksson; Leif Groop; Antti Jula; Marjo-Riitta Järvelin; Olli T Raitakari; Veikko Salomaa; Samuli Ripatti
Journal:  PLoS Genet       Date:  2014-02-06       Impact factor: 5.917

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