Literature DB >> 21756918

Holotestoid: a computational model for testing hypotheses about echinoid skeleton form and growth.

Maria Abou Chakra1, Jonathon Richard Stone.   

Abstract

Regular echinoid skeletons, or tests, comprise plate patterns and overall shapes that have proven challenging to analyse solely on the basis of any one approach or process. Herein, we present a computational model, Holotestoid, that emulates four macrostructural ontogenic processes involved in test growth (plate growth, plate addition, plate interaction, and plate gapping). We devise a geometric representation for analysing tests and describe how we use analogies (bubble interactions and close-packing) to emulate the processes. In the computational model, the emulated processes are used to determine the plate size and plate shape and combined to simulate a growth zone. We simulated growth zones for Arbacia punctulata and for Strongylocentrotus franciscanus by changing the value for one parameter, the ambulacral column angle. We quantitatively compared morphological features for simulated forms to those for real specimens to test the computational model. Additionally, we simulated growth zones for A. punctulata, S. franciscanus, Eucidaris thouarsii, and Mellita quinquiesperforata by changing three parameters, ambulacral column angle, peristome radius to apical system radius ratio, and apical system radius to column length ratio. Holotestoid can be used to explain morphological disparity among echinoid tests.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21756918     DOI: 10.1016/j.jtbi.2011.06.019

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  4 in total

1.  Flexible sutures reduce bending moments in shells: from the echinoid test to tessellated shell structures.

Authors:  Francesco Marmo; Valentina Perricone; Arsenio Cutolo; Maria Daniela Candia Carnevali; Carla Langella; Luciano Rosati
Journal:  R Soc Open Sci       Date:  2022-05-04       Impact factor: 3.653

2.  A generalized approach to the modeling and analysis of 3D surface morphology in organisms.

Authors:  Janice L Pappas; Daniel J Miller
Journal:  PLoS One       Date:  2013-10-25       Impact factor: 3.240

3.  Micromechanics of Sea Urchin spines.

Authors:  Naomi Tsafnat; John D Fitz Gerald; Hai N Le; Zbigniew H Stachurski
Journal:  PLoS One       Date:  2012-09-11       Impact factor: 3.240

4.  Sea urchin growth dynamics at microstructural length scale revealed by Mn-labeling and cathodoluminescence imaging.

Authors:  Przemysław Gorzelak; Aurélie Dery; Philippe Dubois; Jarosław Stolarski
Journal:  Front Zool       Date:  2017-08-25       Impact factor: 3.172

  4 in total

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