Literature DB >> 21754887

(E,E)-1,2-Bis(2,4,5-trimeth-oxy-benzyl-idene)hydrazine.

Hoong-Kun Fun, Patcharaporn Jansrisewangwong, Chatchanok Karalai, Suchada Chantrapromma.   

Abstract

The asymmetric unit of the title compound, C(20)H(24)N(2)O(6), contains one half-mol-ecule, the complete mol-ecule being generated by a crystallographic inversion centre. The mol-ecule is nearly planar with a dihedral angle between the two benzene rings of 0.03 (4)° and the central C/N/N/C plane making a dihedral angle of 8.59 (7)° with each of its two adjacent benzene rings. The two meth-oxy groups at the ortho and meta positions are slightly twisted [C-O-C-C torsion angles = 7.23 (12) and 5.73 (13)°], whereas the meth-oxy group at the para position is almost coplanar with the attached benzene ring [C-O-C-C torsion angle = -2.02 (13)°]. The crystal structure is stabilized by a weak C-H⋯π inter-action.

Entities:  

Year:  2011        PMID: 21754887      PMCID: PMC3120387          DOI: 10.1107/S1600536811019040

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see: Allen et al. (1987 ▶). For related structures, see: Fun et al. (2010 ▶); Jansrisewangwong et al. (2010 ▶); Zhao et al. (2006 ▶). For background to and the bio­logical activity of hydrazones, see: Avaji et al. (2009 ▶); El-Tabl et al. (2008) ▶; Kitaev et al. (1970 ▶); Qin et al. (2009 ▶); Ramamohan et al. (1995 ▶); Rollas & Küçükgüzel (2007 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C20H24N2O6 M = 388.41 Monoclinic, a = 7.5056 (1) Å b = 7.2523 (1) Å c = 17.4489 (2) Å β = 90.600 (1)° V = 949.74 (2) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 100 K 0.47 × 0.29 × 0.10 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.954, T max = 0.990 18099 measured reflections 2778 independent reflections 2384 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.113 S = 1.04 2778 reflections 175 parameters All H-atom parameters refined Δρmax = 0.45 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811019040/is2713sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811019040/is2713Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811019040/is2713Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H24N2O6F(000) = 412
Mr = 388.41Dx = 1.358 Mg m3
Monoclinic, P21/cMelting point = 523 decompose–523 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 7.5056 (1) ÅCell parameters from 2778 reflections
b = 7.2523 (1) Åθ = 2.3–30.0°
c = 17.4489 (2) ŵ = 0.10 mm1
β = 90.600 (1)°T = 100 K
V = 949.74 (2) Å3Needle, colorless
Z = 20.47 × 0.29 × 0.10 mm
Bruker APEXII CCD area-detector diffractometer2778 independent reflections
Radiation source: sealed tube2384 reflections with I > 2σ(I)
graphiteRint = 0.028
φ and ω scansθmax = 30.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −10→10
Tmin = 0.954, Tmax = 0.990k = −10→10
18099 measured reflectionsl = −24→24
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.113All H-atom parameters refined
S = 1.03w = 1/[σ2(Fo2) + (0.0652P)2 + 0.2144P] where P = (Fo2 + 2Fc2)/3
2778 reflections(Δ/σ)max = 0.001
175 parametersΔρmax = 0.45 e Å3
0 restraintsΔρmin = −0.22 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.26607 (9)0.49751 (9)0.57223 (4)0.01763 (16)
O20.36459 (9)0.78767 (10)0.32476 (4)0.02050 (17)
O30.19145 (9)0.52720 (10)0.25671 (4)0.01952 (17)
N10.03148 (10)0.06200 (11)0.47211 (4)0.01607 (17)
C10.16786 (11)0.35906 (12)0.45749 (5)0.01377 (18)
C20.25348 (11)0.50724 (13)0.49415 (5)0.01428 (18)
C30.32155 (11)0.65346 (13)0.45116 (5)0.01573 (18)
H30.3849 (17)0.7563 (18)0.4767 (7)0.017 (3)*
C40.30093 (11)0.65370 (13)0.37186 (5)0.01537 (18)
C50.21005 (12)0.50854 (13)0.33441 (5)0.01493 (18)
C60.14716 (11)0.36283 (12)0.37708 (5)0.01463 (18)
H60.0847 (18)0.261 (2)0.3529 (8)0.027 (3)*
C70.09679 (11)0.20862 (13)0.50302 (5)0.01512 (18)
H70.0952 (17)0.2209 (18)0.5580 (8)0.024 (3)*
C80.33469 (13)0.65505 (14)0.61202 (6)0.0198 (2)
H8A0.3252 (17)0.6258 (19)0.6634 (8)0.024 (3)*
H8B0.2642 (17)0.767 (2)0.5997 (8)0.026 (3)*
H8C0.4583 (18)0.6749 (19)0.5978 (7)0.024 (3)*
C90.45348 (15)0.94046 (15)0.35983 (6)0.0249 (2)
H9A0.3707 (19)1.004 (2)0.3925 (8)0.034 (4)*
H9B0.5579 (18)0.897 (2)0.3891 (8)0.031 (3)*
H9C0.4852 (18)1.010 (2)0.3165 (8)0.028 (3)*
C100.08467 (16)0.39153 (16)0.21898 (6)0.0263 (2)
H10A−0.0319 (16)0.3831 (18)0.2454 (7)0.019 (3)*
H10B0.1449 (19)0.274 (2)0.2202 (8)0.032 (4)*
H10C0.0681 (19)0.439 (2)0.1671 (9)0.036 (4)*
U11U22U33U12U13U23
O10.0217 (3)0.0191 (3)0.0121 (3)−0.0045 (3)−0.0015 (2)−0.0018 (2)
O20.0267 (3)0.0158 (3)0.0191 (3)−0.0071 (3)0.0024 (3)0.0024 (3)
O30.0275 (3)0.0192 (4)0.0119 (3)−0.0045 (3)−0.0002 (2)0.0015 (2)
N10.0200 (3)0.0150 (4)0.0132 (3)−0.0027 (3)0.0013 (3)0.0023 (3)
C10.0144 (4)0.0136 (4)0.0133 (4)−0.0009 (3)0.0004 (3)0.0001 (3)
C20.0145 (3)0.0155 (4)0.0128 (4)−0.0004 (3)0.0001 (3)−0.0010 (3)
C30.0159 (4)0.0136 (4)0.0178 (4)−0.0020 (3)0.0005 (3)−0.0014 (3)
C40.0162 (4)0.0129 (4)0.0171 (4)−0.0003 (3)0.0024 (3)0.0013 (3)
C50.0172 (4)0.0156 (4)0.0121 (4)−0.0005 (3)0.0010 (3)0.0004 (3)
C60.0166 (4)0.0135 (4)0.0138 (4)−0.0018 (3)0.0005 (3)−0.0004 (3)
C70.0168 (4)0.0164 (4)0.0121 (4)−0.0013 (3)0.0001 (3)0.0011 (3)
C80.0215 (4)0.0204 (5)0.0173 (4)−0.0020 (4)−0.0017 (3)−0.0057 (3)
C90.0301 (5)0.0182 (5)0.0266 (5)−0.0096 (4)0.0038 (4)−0.0007 (4)
C100.0402 (6)0.0241 (5)0.0145 (4)−0.0086 (5)−0.0043 (4)−0.0010 (4)
O1—C21.3664 (10)C4—C51.4112 (12)
O1—C81.4301 (11)C5—C61.3789 (12)
O2—C41.3624 (11)C6—H60.970 (14)
O2—C91.4279 (12)C7—H70.964 (13)
O3—C51.3681 (10)C8—H8A0.924 (13)
O3—C101.4257 (12)C8—H8B0.991 (14)
N1—C71.2870 (12)C8—H8C0.974 (13)
N1—N1i1.4103 (15)C9—H9A0.966 (15)
C1—C21.4031 (12)C9—H9B0.981 (14)
C1—C61.4102 (12)C9—H9C0.944 (14)
C1—C71.4544 (12)C10—H10A0.995 (12)
C2—C31.3987 (12)C10—H10B0.967 (16)
C3—C41.3906 (12)C10—H10C0.976 (15)
C3—H30.988 (13)
C2—O1—C8117.62 (7)N1—C7—C1122.08 (8)
C4—O2—C9117.39 (7)N1—C7—H7119.0 (8)
C5—O3—C10116.12 (7)C1—C7—H7118.9 (8)
C7—N1—N1i111.49 (9)O1—C8—H8A104.9 (8)
C2—C1—C6118.95 (8)O1—C8—H8B111.1 (8)
C2—C1—C7119.62 (8)H8A—C8—H8B110.6 (11)
C6—C1—C7121.39 (8)O1—C8—H8C109.5 (8)
O1—C2—C3123.51 (8)H8A—C8—H8C111.4 (11)
O1—C2—C1116.21 (8)H8B—C8—H8C109.4 (11)
C3—C2—C1120.28 (8)O2—C9—H9A108.9 (9)
C4—C3—C2119.81 (8)O2—C9—H9B110.1 (9)
C4—C3—H3119.7 (7)H9A—C9—H9B111.1 (12)
C2—C3—H3120.5 (7)O2—C9—H9C101.2 (9)
O2—C4—C3124.41 (8)H9A—C9—H9C112.6 (12)
O2—C4—C5115.05 (8)H9B—C9—H9C112.4 (12)
C3—C4—C5120.54 (8)O3—C10—H10A108.7 (7)
O3—C5—C6125.38 (8)O3—C10—H10B109.8 (9)
O3—C5—C4115.40 (8)H10A—C10—H10B110.4 (12)
C6—C5—C4119.22 (8)O3—C10—H10C104.5 (9)
C5—C6—C1121.15 (8)H10A—C10—H10C110.3 (11)
C5—C6—H6121.1 (8)H10B—C10—H10C112.8 (12)
C1—C6—H6117.8 (8)
C8—O1—C2—C37.23 (12)C10—O3—C5—C4−173.90 (8)
C8—O1—C2—C1−173.26 (8)O2—C4—C5—O3−2.95 (12)
C6—C1—C2—O1178.64 (7)C3—C4—C5—O3177.39 (8)
C7—C1—C2—O10.86 (12)O2—C4—C5—C6177.39 (8)
C6—C1—C2—C3−1.84 (13)C3—C4—C5—C6−2.26 (13)
C7—C1—C2—C3−179.61 (8)O3—C5—C6—C1−177.86 (8)
O1—C2—C3—C4−179.16 (8)C4—C5—C6—C11.76 (13)
C1—C2—C3—C41.34 (13)C2—C1—C6—C50.27 (13)
C9—O2—C4—C3−2.02 (13)C7—C1—C6—C5178.00 (8)
C9—O2—C4—C5178.34 (8)N1i—N1—C7—C1−178.99 (9)
C2—C3—C4—O2−178.90 (8)C2—C1—C7—N1−173.65 (8)
C2—C3—C4—C50.72 (13)C6—C1—C7—N18.63 (13)
C10—O3—C5—C65.73 (13)
Cg1 is the centroid of the C1–C6 ring.
D—H···AD—HH···AD···AD—H···A
C8—H8C···Cg1ii0.974 (13)2.675 (14)3.4837 (10)140.7 (10)
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C8—H8CCg1i0.974 (13)2.675 (14)3.4837 (10)140.7 (10)

Symmetry code: (i) .

  8 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis, fluorescence study and biological evaluation of three Zn(II) complexes with Paeonol Schiff base.

Authors:  Dong-dong Qin; Zheng-yin Yang; Gao-fei Qi
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2009-06-21       Impact factor: 4.098

Review 3.  Biological activities of hydrazone derivatives.

Authors:  Sevim Rollas; S Güniz Küçükgüzel
Journal:  Molecules       Date:  2007-08-17       Impact factor: 4.411

4.  Synthesis, spectroscopic characterization and biological activity of the metal complexes of the Schiff base derived from phenylaminoacetohydrazide and dibenzoylmethane.

Authors:  Abdou Saad El-Tabl; Fathey A El-Saied; Winfried Plass; Ahmed Noman Al-Hakimi
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2007-11-22       Impact factor: 4.098

5.  Synthesis, spectral characterization, in-vitro microbiological evaluation and cytotoxic activities of novel macrocyclic bis hydrazone.

Authors:  Prakash Gouda Avaji; C H Vinod Kumar; Sangamesh A Patil; K N Shivananda; C Nagaraju
Journal:  Eur J Med Chem       Date:  2009-04-05       Impact factor: 6.514

6.  (E,E)-1,2-Bis(2,4,6-trimeth-oxy-benzyl-idene)hydrazine.

Authors:  Hoong-Kun Fun; Patcharaporn Jansrisewangwong; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-25

7.  (E,E)-1,2-Bis[1-(2-bromo-phen-yl)ethyl-idene]hydrazine.

Authors:  Patcharaporn Jansrisewangwong; Suchada Chantrapromma; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-31

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  8 in total
  1 in total

1.  (1E,2E)-1,2-Bis[1-(3-chloro-phen-yl)ethyl-idene]hydrazine.

Authors:  Hoong-Kun Fun; Patcharaporn Jansrisewangwong; Chatchanok Karalai; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-25
  1 in total

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