| Literature DB >> 21754849 |
Xiao-Yu Qing, Yun-Chuang Huang, Ling-Ling Yang, Yong-Mei Xie.
Abstract
There are two mol-ecules in the asymmetric unit mol-ecule of the title compound, C(8)H(10)ClN(3)O(2). Intra-molecular N-H⋯O hydrogen bonds stabilize the mol-ecular structure. There are no classical inter-molecular hydrogen bonds in the crystal structure.Entities:
Year: 2011 PMID: 21754849 PMCID: PMC3120349 DOI: 10.1107/S1600536811018083
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H10ClN3O2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2782 reflections | |
| θ = 3.0–29.2° | |
| µ = 0.36 mm−1 | |
| α = 89.672 (9)° | |
| β = 86.252 (9)° | Block, colourless |
| γ = 78.860 (9)° | 0.28 × 0.23 × 0.18 mm |
| Oxford Diffraction Xcalibur Eos diffractometer | 4073 independent reflections |
| Radiation source: fine-focus sealed tube | 2773 reflections with |
| graphite | |
| Detector resolution: 16.0874 pixels mm-1 | θmax = 26.4°, θmin = 3.0° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 8239 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4073 reflections | (Δ/σ)max < 0.001 |
| 257 parameters | Δρmax = 0.24 e Å−3 |
| 0 restraints | Δρmin = −0.21 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.27337 (14) | −0.24866 (9) | 0.55983 (6) | 0.0755 (3) | |
| Cl2 | 0.22248 (13) | 0.27284 (9) | 0.95299 (6) | 0.0649 (3) | |
| O1 | 0.2452 (5) | 0.3317 (3) | 0.30153 (16) | 0.1036 (10) | |
| O2 | 0.2403 (4) | 0.4488 (3) | 0.42175 (16) | 0.0911 (9) | |
| O3 | 0.3152 (4) | 0.9485 (3) | 1.08072 (16) | 0.0773 (7) | |
| O4 | 0.3156 (4) | 0.8329 (3) | 1.20304 (15) | 0.0806 (8) | |
| N1 | 0.2670 (3) | 0.0404 (3) | 0.55475 (14) | 0.0438 (6) | |
| N2 | 0.2640 (4) | 0.2945 (3) | 0.56967 (15) | 0.0510 (6) | |
| H2 | 0.2646 | 0.3818 | 0.5464 | 0.061* | |
| N3 | 0.2445 (4) | 0.3306 (4) | 0.38070 (18) | 0.0692 (8) | |
| N4 | 0.2595 (3) | 0.5533 (2) | 0.95342 (14) | 0.0420 (5) | |
| N5 | 0.2928 (4) | 0.8005 (3) | 0.93459 (15) | 0.0504 (6) | |
| H5 | 0.3087 | 0.8849 | 0.9562 | 0.060* | |
| N6 | 0.3082 (4) | 0.8333 (3) | 1.12380 (17) | 0.0573 (7) | |
| C1 | 0.2645 (4) | −0.0767 (3) | 0.5049 (2) | 0.0476 (7) | |
| C2 | 0.2568 (4) | −0.0768 (4) | 0.4162 (2) | 0.0576 (8) | |
| H2A | 0.2560 | −0.1652 | 0.3850 | 0.069* | |
| C3 | 0.2504 (4) | 0.0606 (4) | 0.3764 (2) | 0.0563 (8) | |
| H3 | 0.2456 | 0.0676 | 0.3164 | 0.068* | |
| C4 | 0.2512 (4) | 0.1893 (3) | 0.42550 (18) | 0.0487 (7) | |
| C5 | 0.2595 (4) | 0.1783 (3) | 0.51714 (17) | 0.0421 (6) | |
| C6 | 0.2678 (4) | 0.2846 (3) | 0.66435 (17) | 0.0452 (7) | |
| H6 | 0.3556 | 0.1926 | 0.6783 | 0.054* | |
| C7 | 0.0831 (4) | 0.2722 (4) | 0.7059 (2) | 0.0684 (9) | |
| H7B | −0.0062 | 0.3597 | 0.6912 | 0.103* | |
| H7C | 0.0894 | 0.2673 | 0.7679 | 0.103* | |
| H7A | 0.0479 | 0.1818 | 0.6853 | 0.103* | |
| C8 | 0.3374 (6) | 0.4205 (4) | 0.6968 (2) | 0.0769 (11) | |
| H8A | 0.4551 | 0.4237 | 0.6680 | 0.115* | |
| H8C | 0.3493 | 0.4121 | 0.7583 | 0.115* | |
| H8B | 0.2520 | 0.5120 | 0.6847 | 0.115* | |
| C9 | 0.2499 (4) | 0.4388 (3) | 1.00420 (19) | 0.0439 (7) | |
| C10 | 0.2613 (4) | 0.4363 (3) | 1.0939 (2) | 0.0503 (7) | |
| H10 | 0.2556 | 0.3494 | 1.1264 | 0.060* | |
| C11 | 0.2814 (4) | 0.5690 (4) | 1.13095 (19) | 0.0493 (7) | |
| H11 | 0.2892 | 0.5746 | 1.1907 | 0.059* | |
| C12 | 0.2901 (4) | 0.6956 (3) | 1.08053 (18) | 0.0428 (6) | |
| C13 | 0.2804 (4) | 0.6865 (3) | 0.98920 (18) | 0.0405 (6) | |
| C14 | 0.2811 (4) | 0.7920 (3) | 0.84014 (18) | 0.0481 (7) | |
| H14 | 0.3504 | 0.6925 | 0.8201 | 0.058* | |
| C15 | 0.0870 (5) | 0.8048 (6) | 0.8159 (2) | 0.0928 (14) | |
| H15C | 0.0166 | 0.9022 | 0.8341 | 0.139* | |
| H15B | 0.0344 | 0.7258 | 0.8439 | 0.139* | |
| H15A | 0.0854 | 0.7946 | 0.7540 | 0.139* | |
| C16 | 0.3737 (5) | 0.9121 (4) | 0.7985 (2) | 0.0737 (10) | |
| H16A | 0.3745 | 0.9037 | 0.7365 | 0.111* | |
| H16B | 0.4978 | 0.8982 | 0.8156 | 0.111* | |
| H16C | 0.3078 | 1.0110 | 0.8169 | 0.111* |
| Cl1 | 0.1077 (7) | 0.0471 (5) | 0.0766 (7) | −0.0291 (5) | 0.0014 (5) | −0.0021 (4) |
| Cl2 | 0.0873 (6) | 0.0453 (5) | 0.0662 (6) | −0.0228 (4) | −0.0058 (4) | 0.0016 (4) |
| O1 | 0.177 (3) | 0.092 (2) | 0.0360 (15) | −0.0075 (19) | −0.0197 (17) | 0.0146 (14) |
| O2 | 0.164 (3) | 0.0536 (15) | 0.0507 (16) | −0.0076 (16) | −0.0119 (16) | 0.0113 (13) |
| O3 | 0.128 (2) | 0.0505 (14) | 0.0553 (15) | −0.0203 (14) | −0.0114 (14) | −0.0059 (12) |
| O4 | 0.118 (2) | 0.0906 (19) | 0.0381 (14) | −0.0327 (15) | −0.0006 (13) | −0.0173 (13) |
| N1 | 0.0527 (14) | 0.0420 (13) | 0.0369 (13) | −0.0108 (10) | −0.0001 (11) | −0.0027 (11) |
| N2 | 0.0850 (18) | 0.0355 (12) | 0.0317 (13) | −0.0100 (12) | −0.0043 (12) | 0.0031 (10) |
| N3 | 0.096 (2) | 0.0656 (19) | 0.0395 (17) | 0.0025 (16) | −0.0126 (15) | 0.0071 (15) |
| N4 | 0.0463 (13) | 0.0424 (13) | 0.0370 (13) | −0.0089 (10) | −0.0009 (10) | 0.0026 (11) |
| N5 | 0.0793 (18) | 0.0376 (13) | 0.0359 (13) | −0.0146 (12) | −0.0054 (12) | −0.0011 (11) |
| N6 | 0.0691 (18) | 0.0601 (17) | 0.0418 (16) | −0.0106 (13) | −0.0013 (13) | −0.0112 (14) |
| C1 | 0.0488 (17) | 0.0441 (16) | 0.0514 (19) | −0.0130 (13) | −0.0023 (13) | −0.0034 (14) |
| C2 | 0.061 (2) | 0.061 (2) | 0.051 (2) | −0.0123 (15) | −0.0064 (15) | −0.0181 (17) |
| C3 | 0.059 (2) | 0.071 (2) | 0.0363 (17) | −0.0060 (16) | −0.0079 (14) | −0.0083 (16) |
| C4 | 0.0536 (18) | 0.0546 (18) | 0.0356 (16) | −0.0038 (14) | −0.0066 (13) | 0.0015 (14) |
| C5 | 0.0476 (16) | 0.0429 (16) | 0.0344 (15) | −0.0051 (12) | −0.0022 (12) | −0.0028 (12) |
| C6 | 0.0665 (19) | 0.0372 (15) | 0.0311 (15) | −0.0067 (13) | −0.0063 (13) | −0.0017 (12) |
| C7 | 0.069 (2) | 0.083 (2) | 0.049 (2) | −0.0039 (18) | 0.0027 (17) | 0.0019 (18) |
| C8 | 0.129 (3) | 0.054 (2) | 0.053 (2) | −0.028 (2) | −0.016 (2) | −0.0034 (17) |
| C9 | 0.0434 (16) | 0.0430 (16) | 0.0451 (17) | −0.0083 (12) | −0.0017 (13) | 0.0028 (13) |
| C10 | 0.0507 (18) | 0.0546 (18) | 0.0471 (18) | −0.0143 (14) | −0.0029 (14) | 0.0154 (15) |
| C11 | 0.0485 (17) | 0.067 (2) | 0.0323 (16) | −0.0125 (14) | 0.0005 (12) | 0.0043 (14) |
| C12 | 0.0435 (16) | 0.0474 (16) | 0.0367 (16) | −0.0073 (12) | −0.0008 (12) | −0.0055 (13) |
| C13 | 0.0426 (15) | 0.0404 (15) | 0.0367 (15) | −0.0037 (11) | −0.0007 (12) | 0.0014 (12) |
| C14 | 0.0665 (19) | 0.0433 (16) | 0.0363 (16) | −0.0139 (14) | −0.0075 (14) | 0.0038 (13) |
| C15 | 0.072 (3) | 0.149 (4) | 0.059 (2) | −0.024 (3) | −0.011 (2) | 0.024 (3) |
| C16 | 0.110 (3) | 0.068 (2) | 0.051 (2) | −0.036 (2) | −0.005 (2) | 0.0099 (18) |
| Cl1—C1 | 1.746 (3) | C6—H6 | 0.9800 |
| Cl2—C9 | 1.740 (3) | C6—C7 | 1.500 (4) |
| O1—N3 | 1.221 (3) | C6—C8 | 1.511 (4) |
| O2—N3 | 1.231 (3) | C7—H7B | 0.9600 |
| O3—N6 | 1.232 (3) | C7—H7C | 0.9600 |
| O4—N6 | 1.228 (3) | C7—H7A | 0.9600 |
| N1—C1 | 1.308 (3) | C8—H8A | 0.9600 |
| N1—C5 | 1.355 (3) | C8—H8C | 0.9600 |
| N2—H2 | 0.8600 | C8—H8B | 0.9600 |
| N2—C5 | 1.329 (3) | C9—C10 | 1.392 (4) |
| N2—C6 | 1.465 (3) | C10—H10 | 0.9300 |
| N3—C4 | 1.432 (4) | C10—C11 | 1.360 (4) |
| N4—C9 | 1.297 (3) | C11—H11 | 0.9300 |
| N4—C13 | 1.357 (3) | C11—C12 | 1.381 (4) |
| N5—H5 | 0.8600 | C12—C13 | 1.420 (4) |
| N5—C13 | 1.333 (3) | C14—H14 | 0.9800 |
| N5—C14 | 1.469 (3) | C14—C15 | 1.496 (4) |
| N6—C12 | 1.438 (4) | C14—C16 | 1.504 (4) |
| C1—C2 | 1.374 (4) | C15—H15C | 0.9600 |
| C2—H2A | 0.9300 | C15—H15B | 0.9600 |
| C2—C3 | 1.365 (4) | C15—H15A | 0.9600 |
| C3—H3 | 0.9300 | C16—H16A | 0.9600 |
| C3—C4 | 1.384 (4) | C16—H16B | 0.9600 |
| C4—C5 | 1.421 (4) | C16—H16C | 0.9600 |
| O1—N3—O2 | 120.7 (3) | C6—C8—H8C | 109.5 |
| O1—N3—C4 | 119.2 (3) | C6—C8—H8B | 109.5 |
| O2—N3—C4 | 120.1 (3) | C7—C6—H6 | 108.1 |
| O3—N6—C12 | 119.4 (2) | C7—C6—C8 | 112.7 (3) |
| O4—N6—O3 | 121.6 (3) | H7B—C7—H7C | 109.5 |
| O4—N6—C12 | 118.9 (3) | H7B—C7—H7A | 109.5 |
| N1—C1—Cl1 | 114.6 (2) | H7C—C7—H7A | 109.5 |
| N1—C1—C2 | 126.9 (3) | C8—C6—H6 | 108.1 |
| N1—C5—C4 | 118.8 (2) | H8A—C8—H8C | 109.5 |
| N2—C5—N1 | 116.6 (2) | H8A—C8—H8B | 109.5 |
| N2—C5—C4 | 124.6 (3) | H8C—C8—H8B | 109.5 |
| N2—C6—H6 | 108.1 | C9—N4—C13 | 118.6 (2) |
| N2—C6—C7 | 111.4 (2) | C9—C10—H10 | 122.1 |
| N2—C6—C8 | 108.3 (2) | C10—C9—Cl2 | 118.0 (2) |
| N4—C9—Cl2 | 115.5 (2) | C10—C11—H11 | 119.7 |
| N4—C9—C10 | 126.5 (3) | C10—C11—C12 | 120.5 (3) |
| N4—C13—C12 | 118.9 (2) | C11—C10—C9 | 115.7 (3) |
| N5—C13—N4 | 116.6 (2) | C11—C10—H10 | 122.1 |
| N5—C13—C12 | 124.4 (2) | C11—C12—N6 | 117.8 (3) |
| N5—C14—H14 | 107.9 | C11—C12—C13 | 119.7 (3) |
| N5—C14—C15 | 111.9 (3) | C12—C11—H11 | 119.7 |
| N5—C14—C16 | 108.4 (2) | C13—N5—H5 | 117.7 |
| C1—N1—C5 | 118.3 (2) | C13—N5—C14 | 124.6 (2) |
| C1—C2—H2A | 122.0 | C13—C12—N6 | 122.5 (3) |
| C2—C1—Cl1 | 118.4 (2) | C14—N5—H5 | 117.7 |
| C2—C3—H3 | 120.0 | C14—C15—H15C | 109.5 |
| C2—C3—C4 | 120.0 (3) | C14—C15—H15B | 109.5 |
| C3—C2—C1 | 116.0 (3) | C14—C15—H15A | 109.5 |
| C3—C2—H2A | 122.0 | C14—C16—H16A | 109.5 |
| C3—C4—N3 | 117.8 (3) | C14—C16—H16B | 109.5 |
| C3—C4—C5 | 120.0 (3) | C14—C16—H16C | 109.5 |
| C4—C3—H3 | 120.0 | C15—C14—H14 | 107.9 |
| C5—N2—H2 | 117.6 | C15—C14—C16 | 112.8 (3) |
| C5—N2—C6 | 124.8 (2) | H15C—C15—H15B | 109.5 |
| C5—C4—N3 | 122.2 (3) | H15C—C15—H15A | 109.5 |
| C6—N2—H2 | 117.6 | H15B—C15—H15A | 109.5 |
| C6—C7—H7B | 109.5 | C16—C14—H14 | 107.9 |
| C6—C7—H7C | 109.5 | H16A—C16—H16B | 109.5 |
| C6—C7—H7A | 109.5 | H16A—C16—H16C | 109.5 |
| C6—C8—H8A | 109.5 | H16B—C16—H16C | 109.5 |
| H··· | ||||
| N2—H2···O2 | 0.86 | 2.02 | 2.660 (3) | 130 |
| N5—H5···O3 | 0.86 | 2.01 | 2.653 (3) | 130 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯O2 | 0.86 | 2.02 | 2.660 (3) | 130 |
| N5—H5⋯O3 | 0.86 | 2.01 | 2.653 (3) | 130 |