Literature DB >> 21754816

N,N,N',N'-Tetra-kis(2-hy-droxy-5-methyl-benz-yl)ethane-1,2-diamine dimethyl-formamide disolvate.

Nuan-Sheng Wang, Yong-Tao Wang, Xiu-Kai Guo, Tian-Duo Li.   

Abstract

The title compound, C(34)H(40)N(2)O(4)·2C(3)H(7)NO, was synthesized by the Mannich condensation of ethane-diamine, formaldehyde and p-cresol. In the crystal, the tetra-phenol mol-ecule is arranged around an inversion center. The mol-ecule and the dimethyl-formamide solvate are linked through an O-H⋯O hydrogen bond. An intra-molecular O-H⋯N hydrogen bond occurs in the tetra-phenol mol-ecule, which may influence the mol-ecular confomation. Futhermore, C-H⋯O and π-π stacking inter-actions [centroid-centroid distance = 3.7081 (14) Å] stabilize the crystal packing, building a three-dimensional network.

Entities:  

Year:  2011        PMID: 21754816      PMCID: PMC3120359          DOI: 10.1107/S1600536811017934

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of the title compound, see: Liu et al. (2007 ▶); Tshuva et al. (2000 ▶); For related structures, see: Hou et al. (2010 ▶); Higham et al. (2006 ▶); Farrell et al. (2007 ▶).

Experimental

Crystal data

C34H40N2O4·2C3H7NO M = 686.87 Monoclinic, a = 11.574 (2) Å b = 6.3557 (12) Å c = 26.343 (5) Å β = 94.939 (3)° V = 1930.7 (6) Å3 Z = 2 Mo Kα radiation μ = 0.08 mm−1 T = 298 K 0.50 × 0.32 × 0.27 mm

Data collection

Bruker SMART APEX diffractometer 9607 measured reflections 3569 independent reflections 2667 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.154 S = 1.07 3569 reflections 232 parameters H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.15 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶), ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811017934/dn2686sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811017934/dn2686Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811017934/dn2686Isup3.cdx Supplementary material file. DOI: 10.1107/S1600536811017934/dn2686Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C34H40N2O4·2C3H7NOF(000) = 740
Mr = 686.87Dx = 1.182 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2283 reflections
a = 11.574 (2) Åθ = 2.3–22.4°
b = 6.3557 (12) ŵ = 0.08 mm1
c = 26.343 (5) ÅT = 298 K
β = 94.939 (3)°Block, colourless
V = 1930.7 (6) Å30.50 × 0.32 × 0.27 mm
Z = 2
Bruker SMART APEX diffractometer2667 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.029
graphiteθmax = 25.5°, θmin = 1.6°
φ and ω scansh = −13→13
9607 measured reflectionsk = 0→7
3569 independent reflectionsl = 0→31
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.058Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.154H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0747P)2 + 0.2941P] where P = (Fo2 + 2Fc2)/3
3569 reflections(Δ/σ)max = 0.003
232 parametersΔρmax = 0.19 e Å3
0 restraintsΔρmin = −0.15 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.81761 (16)0.6724 (3)0.50272 (8)0.0459 (5)
C20.80450 (15)0.4662 (3)0.48545 (7)0.0399 (5)
C30.86027 (16)0.4078 (3)0.44304 (7)0.0472 (5)
H30.85080.27090.43090.057*
C40.92929 (17)0.5440 (4)0.41797 (8)0.0546 (6)
C50.94148 (18)0.7469 (4)0.43666 (9)0.0602 (6)
H50.98800.84170.42090.072*
C60.88609 (17)0.8110 (4)0.47813 (9)0.0567 (6)
H60.89480.94870.48970.068*
C70.9908 (2)0.4688 (5)0.37314 (10)0.0846 (9)
H7A1.06490.41110.38510.127*
H7B1.00180.58490.35080.127*
H7C0.94500.36240.35510.127*
C80.74176 (15)0.3055 (3)0.51447 (7)0.0434 (5)
H8A0.72130.18690.49230.052*
H8B0.79330.25460.54280.052*
C90.59865 (17)0.2520 (3)0.57452 (7)0.0465 (5)
H9A0.60640.10640.56420.056*
H9B0.51740.27780.57870.056*
C100.66842 (16)0.2860 (3)0.62476 (7)0.0444 (5)
C110.74762 (17)0.1400 (4)0.64530 (8)0.0503 (5)
H110.75930.01760.62710.060*
C120.81018 (19)0.1691 (4)0.69194 (8)0.0571 (6)
C130.7899 (2)0.3509 (5)0.71814 (8)0.0648 (7)
H130.82990.37310.74980.078*
C140.71194 (19)0.5012 (4)0.69888 (8)0.0615 (6)
H140.70010.62290.71740.074*
C150.65167 (18)0.4696 (4)0.65193 (8)0.0521 (6)
C160.8989 (2)0.0118 (5)0.71276 (11)0.0892 (9)
H16A0.97250.04390.70040.134*
H16B0.8751−0.12690.70190.134*
H16C0.90570.01810.74930.134*
C170.54400 (16)0.4187 (3)0.49300 (7)0.0463 (5)
H17A0.50510.28560.48580.056*
H17B0.57820.46360.46240.056*
N10.63564 (12)0.3898 (3)0.53418 (5)0.0406 (4)
O10.76581 (13)0.7432 (3)0.54411 (6)0.0640 (5)
H10.71790.65670.55200.096*
O20.57293 (15)0.6113 (3)0.63071 (6)0.0721 (5)
H20.55630.69570.65250.108*
C180.4736 (2)1.0737 (4)0.69918 (8)0.0546 (6)
H180.50891.17100.72190.066*
C190.3253 (3)0.9941 (6)0.63369 (15)0.1233 (13)
H19A0.37850.88640.62520.185*
H19B0.29821.06950.60340.185*
H19C0.26060.93070.64840.185*
C200.3383 (3)1.3486 (5)0.67385 (12)0.0963 (10)
H20A0.38601.42600.69900.144*
H20B0.26041.34220.68370.144*
H20C0.33851.41760.64140.144*
N20.38342 (17)1.1383 (3)0.67004 (7)0.0636 (5)
O30.51586 (16)0.8979 (3)0.69941 (6)0.0731 (5)
U11U22U33U12U13U23
C10.0384 (10)0.0481 (13)0.0502 (12)0.0064 (9)−0.0022 (9)−0.0022 (10)
C20.0319 (9)0.0477 (12)0.0389 (10)0.0071 (8)−0.0024 (8)0.0010 (9)
C30.0417 (11)0.0552 (13)0.0442 (11)0.0071 (9)0.0001 (9)−0.0009 (10)
C40.0419 (11)0.0752 (17)0.0469 (12)0.0068 (11)0.0041 (9)0.0115 (11)
C50.0422 (12)0.0656 (17)0.0723 (15)−0.0005 (11)0.0026 (11)0.0213 (13)
C60.0442 (12)0.0465 (13)0.0783 (16)0.0004 (10)−0.0007 (11)0.0036 (11)
C70.0739 (17)0.120 (3)0.0630 (15)−0.0014 (17)0.0253 (14)0.0050 (16)
C80.0400 (10)0.0458 (12)0.0440 (11)0.0088 (9)0.0025 (8)−0.0009 (9)
C90.0428 (11)0.0514 (13)0.0455 (11)−0.0021 (9)0.0049 (9)−0.0026 (9)
C100.0452 (11)0.0516 (13)0.0377 (10)−0.0029 (9)0.0106 (8)0.0003 (9)
C110.0540 (12)0.0500 (13)0.0477 (11)−0.0015 (10)0.0098 (10)0.0024 (10)
C120.0546 (13)0.0705 (16)0.0458 (12)−0.0007 (11)0.0019 (10)0.0075 (11)
C130.0586 (14)0.093 (2)0.0422 (12)−0.0093 (13)−0.0011 (11)−0.0027 (13)
C140.0633 (14)0.0755 (17)0.0469 (12)−0.0021 (12)0.0109 (11)−0.0160 (11)
C150.0515 (12)0.0600 (15)0.0458 (12)0.0057 (10)0.0107 (10)−0.0030 (10)
C160.0865 (19)0.100 (2)0.0772 (18)0.0155 (17)−0.0128 (16)0.0156 (16)
C170.0416 (10)0.0563 (13)0.0402 (10)0.0066 (9)−0.0011 (8)−0.0110 (9)
N10.0364 (8)0.0495 (10)0.0361 (8)0.0050 (7)0.0033 (7)−0.0033 (7)
O10.0680 (11)0.0568 (11)0.0690 (10)−0.0011 (8)0.0163 (8)−0.0191 (8)
O20.0804 (12)0.0741 (13)0.0611 (10)0.0264 (9)0.0021 (9)−0.0153 (9)
C180.0682 (14)0.0544 (15)0.0419 (11)0.0012 (12)0.0088 (11)−0.0042 (10)
C190.123 (3)0.123 (3)0.114 (3)−0.020 (2)−0.048 (2)−0.016 (2)
C200.096 (2)0.089 (2)0.103 (2)0.0314 (18)0.0033 (18)0.0172 (18)
N20.0689 (12)0.0650 (14)0.0549 (11)−0.0008 (10)−0.0066 (10)0.0031 (10)
O30.0999 (13)0.0595 (11)0.0612 (10)0.0219 (10)0.0149 (9)−0.0026 (8)
C1—O11.365 (2)C12—C161.502 (4)
C1—C61.383 (3)C13—C141.380 (3)
C1—C21.391 (3)C13—H130.9300
C2—C31.388 (3)C14—C151.381 (3)
C2—C81.500 (3)C14—H140.9300
C3—C41.384 (3)C15—O21.366 (3)
C3—H30.9300C16—H16A0.9600
C4—C51.383 (3)C16—H16B0.9600
C4—C71.508 (3)C16—H16C0.9600
C5—C61.375 (3)C17—N11.462 (2)
C5—H50.9300C17—C17i1.518 (4)
C6—H60.9300C17—H17A0.9700
C7—H7A0.9600C17—H17B0.9700
C7—H7B0.9600O1—H10.8200
C7—H7C0.9600O2—H20.8200
C8—N11.475 (2)C18—O31.219 (3)
C8—H8A0.9700C18—N21.307 (3)
C8—H8B0.9700C18—H180.9300
C9—N11.469 (2)C19—N21.449 (4)
C9—C101.506 (3)C19—H19A0.9600
C9—H9A0.9700C19—H19B0.9600
C9—H9B0.9700C19—H19C0.9600
C10—C111.381 (3)C20—N21.442 (3)
C10—C151.391 (3)C20—H20A0.9600
C11—C121.384 (3)C20—H20B0.9600
C11—H110.9300C20—H20C0.9600
C12—C131.376 (4)
O1—C1—C6118.2 (2)C12—C13—C14122.1 (2)
O1—C1—C2121.92 (18)C12—C13—H13119.0
C6—C1—C2119.9 (2)C14—C13—H13119.0
C3—C2—C1118.04 (19)C13—C14—C15119.5 (2)
C3—C2—C8120.45 (18)C13—C14—H14120.3
C1—C2—C8121.25 (17)C15—C14—H14120.3
C4—C3—C2123.0 (2)O2—C15—C14122.6 (2)
C4—C3—H3118.5O2—C15—C10117.40 (18)
C2—C3—H3118.5C14—C15—C10120.0 (2)
C5—C4—C3117.3 (2)C12—C16—H16A109.5
C5—C4—C7122.3 (2)C12—C16—H16B109.5
C3—C4—C7120.4 (2)H16A—C16—H16B109.5
C6—C5—C4121.3 (2)C12—C16—H16C109.5
C6—C5—H5119.4H16A—C16—H16C109.5
C4—C5—H5119.4H16B—C16—H16C109.5
C5—C6—C1120.6 (2)N1—C17—C17i111.36 (19)
C5—C6—H6119.7N1—C17—H17A109.4
C1—C6—H6119.7C17i—C17—H17A109.4
C4—C7—H7A109.5N1—C17—H17B109.4
C4—C7—H7B109.5C17i—C17—H17B109.4
H7A—C7—H7B109.5H17A—C17—H17B108.0
C4—C7—H7C109.5C17—N1—C9111.94 (15)
H7A—C7—H7C109.5C17—N1—C8110.94 (14)
H7B—C7—H7C109.5C9—N1—C8109.95 (15)
N1—C8—C2112.72 (16)C1—O1—H1109.5
N1—C8—H8A109.0C15—O2—H2109.5
C2—C8—H8A109.0O3—C18—N2126.2 (2)
N1—C8—H8B109.0O3—C18—H18116.9
C2—C8—H8B109.0N2—C18—H18116.9
H8A—C8—H8B107.8N2—C19—H19A109.5
N1—C9—C10112.49 (16)N2—C19—H19B109.5
N1—C9—H9A109.1H19A—C19—H19B109.5
C10—C9—H9A109.1N2—C19—H19C109.5
N1—C9—H9B109.1H19A—C19—H19C109.5
C10—C9—H9B109.1H19B—C19—H19C109.5
H9A—C9—H9B107.8N2—C20—H20A109.5
C11—C10—C15118.63 (19)N2—C20—H20B109.5
C11—C10—C9122.36 (19)H20A—C20—H20B109.5
C15—C10—C9119.00 (18)N2—C20—H20C109.5
C10—C11—C12122.5 (2)H20A—C20—H20C109.5
C10—C11—H11118.8H20B—C20—H20C109.5
C12—C11—H11118.8C18—N2—C20121.7 (2)
C13—C12—C11117.3 (2)C18—N2—C19119.4 (3)
C13—C12—C16121.1 (2)C20—N2—C19118.8 (3)
C11—C12—C16121.6 (2)
O1—C1—C2—C3179.97 (17)C10—C11—C12—C130.7 (3)
C6—C1—C2—C3−0.9 (3)C10—C11—C12—C16−177.9 (2)
O1—C1—C2—C8−5.9 (3)C11—C12—C13—C14−1.0 (3)
C6—C1—C2—C8173.23 (18)C16—C12—C13—C14177.5 (2)
C1—C2—C3—C41.1 (3)C12—C13—C14—C150.2 (4)
C8—C2—C3—C4−173.15 (18)C13—C14—C15—O2179.7 (2)
C2—C3—C4—C5−0.2 (3)C13—C14—C15—C100.9 (3)
C2—C3—C4—C7177.9 (2)C11—C10—C15—O2179.93 (18)
C3—C4—C5—C6−0.7 (3)C9—C10—C15—O2−0.9 (3)
C7—C4—C5—C6−178.9 (2)C11—C10—C15—C14−1.2 (3)
C4—C5—C6—C10.9 (3)C9—C10—C15—C14177.91 (19)
O1—C1—C6—C5179.13 (19)C17i—C17—N1—C980.0 (3)
C2—C1—C6—C50.0 (3)C17i—C17—N1—C8−156.7 (2)
C3—C2—C8—N1−144.07 (17)C10—C9—N1—C17−157.41 (16)
C1—C2—C8—N141.9 (2)C10—C9—N1—C878.8 (2)
N1—C9—C10—C11−109.0 (2)C2—C8—N1—C1773.2 (2)
N1—C9—C10—C1571.9 (2)C2—C8—N1—C9−162.47 (15)
C15—C10—C11—C120.4 (3)O3—C18—N2—C20178.2 (2)
C9—C10—C11—C12−178.70 (19)O3—C18—N2—C19−0.4 (4)
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.821.982.705 (2)147
O2—H2···O30.821.872.690 (2)177
C18—H18···O3ii0.932.563.368 (3)145
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N10.821.982.705 (2)147
O2—H2⋯O30.821.872.690 (2)177
C18—H18⋯O3i0.932.563.368 (3)145

Symmetry code: (i) .

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