Literature DB >> 21754804

Dimethyl 2-(3-chloro-phen-yl)-6-hy-droxy-6-methyl-4-(methyl-amino)-cyclo-hex-3-ene-1,3-dicarboxyl-ate.

S Amirthaganesan, S Sundaramoorthy, D Velmurugan, Y T Jeong.   

Abstract

In the title compound, C(18)H(22)ClNO(5), the cyclo-hexene ring adopts a distorted half-chair conformation. The mol-ecular structure is stabilized by pairs of intra-molecular N-H⋯O and O-H⋯O inter-actions, generating S(6) motifs. In the crystal, the mol-ecules are linked by inter-molecular C-H⋯O inter-actions, forming centrosymmetric dimers.

Entities:  

Year:  2011        PMID: 21754804      PMCID: PMC3120530          DOI: 10.1107/S1600536811017089

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis see: Pandiarajan et al. (2005 ▶). For related structures, see: Amézquita-Valencia et al. (2009, ▶ 2010) ▶; Venter et al. (2010 ▶). For ring conformational analysis, see: Cremer & Pople (1975 ▶); Nardelli (1983 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C18H22ClNO5 M = 367.82 Monoclinic, a = 11.962 (3) Å b = 9.118 (4) Å c = 17.704 (5) Å β = 104.890 (3)° V = 1866.1 (11) Å3 Z = 4 Mo Kα radiation μ = 0.23 mm−1 T = 293 K 0.25 × 0.22 × 0.2 mm

Data collection

Bruker SMART APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.944, T max = 0.955 17431 measured reflections 4638 independent reflections 3337 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.138 S = 1.04 4638 reflections 231 parameters H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.46 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811017089/bt5540sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811017089/bt5540Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H22ClNO5F(000) = 776
Mr = 367.82Dx = 1.309 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1222 reflections
a = 11.962 (3) Åθ = 1.8–28.3°
b = 9.118 (4) ŵ = 0.23 mm1
c = 17.704 (5) ÅT = 293 K
β = 104.890 (3)°Block, colourless
V = 1866.1 (11) Å30.25 × 0.22 × 0.2 mm
Z = 4
Bruker SMART APEXII area-detector diffractometer4638 independent reflections
Radiation source: fine-focus sealed tube3337 reflections with I > 2σ(I)
graphiteRint = 0.024
ω and φ scansθmax = 28.3°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −15→15
Tmin = 0.944, Tmax = 0.955k = −7→12
17431 measured reflectionsl = −23→23
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.138H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0627P)2 + 0.4709P] where P = (Fo2 + 2Fc2)/3
4638 reflections(Δ/σ)max = 0.009
231 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = −0.46 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.20024 (13)0.2336 (2)0.66810 (9)0.0491 (4)
H10.26930.19750.66060.059*
C20.10067 (15)0.1499 (2)0.64705 (10)0.0606 (5)
C3−0.00304 (16)0.2004 (3)0.65606 (12)0.0762 (7)
H3−0.06960.14340.64120.091*
C4−0.00607 (16)0.3366 (4)0.68751 (14)0.0845 (8)
H4−0.07570.37220.69440.101*
C50.09225 (15)0.4229 (3)0.70946 (12)0.0671 (5)
H50.08810.51570.73030.081*
C60.19700 (12)0.37074 (19)0.70030 (9)0.0454 (4)
C70.30800 (12)0.45902 (17)0.72953 (8)0.0404 (3)
H70.28680.55890.74080.048*
C80.37441 (12)0.38775 (16)0.80710 (8)0.0405 (3)
H80.37660.28160.79890.049*
C90.49940 (13)0.44328 (17)0.83388 (9)0.0421 (3)
C100.56091 (13)0.39960 (18)0.77252 (9)0.0450 (3)
H10A0.63580.44750.78430.054*
H10B0.57430.29460.77580.054*
C110.49636 (13)0.43744 (17)0.68999 (9)0.0410 (3)
C120.38012 (13)0.46821 (16)0.67106 (8)0.0404 (3)
C130.32399 (14)0.51982 (17)0.59341 (9)0.0444 (3)
C140.15531 (18)0.6312 (3)0.51469 (11)0.0699 (5)
H14A0.19770.70820.49760.105*
H14B0.08180.66810.51840.105*
H14C0.14350.55190.47780.105*
C150.68410 (14)0.4189 (2)0.65474 (11)0.0597 (5)
H15A0.72250.49800.68690.090*
H15B0.70750.41720.60680.090*
H15C0.70450.32760.68180.090*
C160.56123 (15)0.3786 (2)0.91304 (9)0.0558 (4)
H16A0.64180.40410.92510.084*
H16B0.55330.27380.91120.084*
H16C0.52760.41720.95260.084*
C170.31063 (14)0.41559 (19)0.86895 (9)0.0469 (4)
C180.2187 (3)0.3077 (3)0.95785 (16)0.0975 (9)
H18A0.27350.33211.00610.146*
H18B0.18140.21680.96380.146*
H18C0.16180.38400.94420.146*
N10.56045 (12)0.43967 (18)0.63774 (8)0.0528 (4)
H1A0.52440.45490.58970.063*
O10.36279 (10)0.51675 (14)0.53585 (7)0.0560 (3)
O20.21941 (10)0.57946 (15)0.58975 (7)0.0584 (3)
O30.50425 (11)0.59997 (12)0.83719 (7)0.0542 (3)
H4A0.46530.62980.86600.081*
O40.29242 (13)0.53525 (15)0.89139 (8)0.0645 (4)
O50.27827 (13)0.29272 (15)0.89645 (8)0.0682 (4)
Cl10.10795 (6)−0.02490 (8)0.60884 (5)0.1010 (3)
U11U22U33U12U13U23
C10.0376 (8)0.0622 (10)0.0469 (8)−0.0061 (7)0.0098 (6)0.0010 (8)
C20.0497 (9)0.0767 (13)0.0517 (10)−0.0198 (9)0.0062 (8)0.0058 (9)
C30.0414 (10)0.119 (2)0.0647 (12)−0.0225 (11)0.0068 (8)0.0159 (13)
C40.0342 (9)0.140 (2)0.0821 (15)0.0098 (12)0.0193 (9)0.0128 (16)
C50.0430 (9)0.0944 (15)0.0655 (11)0.0141 (10)0.0169 (8)−0.0020 (11)
C60.0350 (7)0.0616 (10)0.0400 (7)0.0044 (7)0.0102 (6)0.0052 (7)
C70.0387 (7)0.0420 (8)0.0394 (7)0.0054 (6)0.0081 (6)−0.0008 (6)
C80.0421 (7)0.0376 (7)0.0403 (7)0.0038 (6)0.0079 (6)−0.0009 (6)
C90.0426 (8)0.0385 (8)0.0417 (7)0.0042 (6)0.0044 (6)−0.0030 (6)
C100.0374 (7)0.0481 (8)0.0466 (8)0.0037 (6)0.0055 (6)−0.0020 (7)
C110.0403 (7)0.0386 (7)0.0437 (8)−0.0035 (6)0.0102 (6)−0.0024 (6)
C120.0397 (7)0.0400 (7)0.0403 (7)−0.0017 (6)0.0082 (6)−0.0007 (6)
C130.0426 (8)0.0434 (8)0.0448 (8)−0.0040 (6)0.0067 (6)−0.0010 (6)
C140.0613 (11)0.0841 (14)0.0560 (10)0.0188 (10)−0.0002 (9)0.0116 (10)
C150.0439 (9)0.0733 (12)0.0662 (11)0.0014 (8)0.0220 (8)0.0039 (9)
C160.0540 (9)0.0634 (11)0.0444 (8)0.0121 (8)0.0024 (7)0.0013 (8)
C170.0467 (8)0.0512 (9)0.0415 (8)0.0065 (7)0.0089 (6)0.0045 (7)
C180.119 (2)0.0965 (19)0.1025 (18)0.0165 (16)0.0740 (17)0.0306 (15)
N10.0410 (7)0.0695 (9)0.0493 (8)−0.0001 (6)0.0142 (6)0.0047 (7)
O10.0550 (7)0.0707 (8)0.0418 (6)−0.0006 (6)0.0115 (5)0.0031 (6)
O20.0510 (7)0.0724 (8)0.0494 (6)0.0148 (6)0.0085 (5)0.0126 (6)
O30.0582 (7)0.0396 (6)0.0613 (7)0.0005 (5)0.0093 (6)−0.0078 (5)
O40.0821 (9)0.0578 (8)0.0607 (8)0.0108 (7)0.0313 (7)−0.0045 (6)
O50.0826 (9)0.0585 (8)0.0754 (9)0.0083 (7)0.0420 (7)0.0149 (7)
Cl10.0875 (4)0.0874 (5)0.1206 (5)−0.0422 (3)0.0133 (4)−0.0251 (4)
C1—C61.379 (2)C11—N11.345 (2)
C1—C21.383 (2)C11—C121.373 (2)
C1—H10.9300C12—C131.445 (2)
C2—C31.370 (3)C13—O11.2237 (19)
C2—Cl11.743 (2)C13—O21.350 (2)
C3—C41.365 (4)C14—O21.433 (2)
C3—H30.9300C14—H14A0.9600
C4—C51.385 (3)C14—H14B0.9600
C4—H40.9300C14—H14C0.9600
C5—C61.388 (2)C15—N11.444 (2)
C5—H50.9300C15—H15A0.9600
C6—C71.525 (2)C15—H15B0.9600
C7—C121.511 (2)C15—H15C0.9600
C7—C81.542 (2)C16—H16A0.9600
C7—H70.9800C16—H16B0.9600
C8—C171.508 (2)C16—H16C0.9600
C8—C91.534 (2)C17—O41.200 (2)
C8—H80.9800C17—O51.319 (2)
C9—O31.430 (2)C18—O51.451 (2)
C9—C101.514 (2)C18—H18A0.9600
C9—C161.525 (2)C18—H18B0.9600
C10—C111.507 (2)C18—H18C0.9600
C10—H10A0.9700N1—H1A0.8600
C10—H10B0.9700O3—H4A0.8200
C6—C1—C2119.88 (16)N1—C11—C12123.34 (14)
C6—C1—H1120.1N1—C11—C10115.45 (13)
C2—C1—H1120.1C12—C11—C10121.20 (13)
C3—C2—C1121.8 (2)C11—C12—C13119.52 (14)
C3—C2—Cl1119.31 (16)C11—C12—C7122.84 (13)
C1—C2—Cl1118.94 (16)C13—C12—C7117.55 (13)
C4—C3—C2118.21 (19)O1—C13—O2120.94 (14)
C4—C3—H3120.9O1—C13—C12127.01 (15)
C2—C3—H3120.9O2—C13—C12112.03 (13)
C3—C4—C5121.43 (19)O2—C14—H14A109.5
C3—C4—H4119.3O2—C14—H14B109.5
C5—C4—H4119.3H14A—C14—H14B109.5
C4—C5—C6120.0 (2)O2—C14—H14C109.5
C4—C5—H5120.0H14A—C14—H14C109.5
C6—C5—H5120.0H14B—C14—H14C109.5
C1—C6—C5118.74 (17)N1—C15—H15A109.5
C1—C6—C7120.30 (13)N1—C15—H15B109.5
C5—C6—C7120.86 (17)H15A—C15—H15B109.5
C12—C7—C6113.42 (12)N1—C15—H15C109.5
C12—C7—C8112.29 (12)H15A—C15—H15C109.5
C6—C7—C8106.51 (12)H15B—C15—H15C109.5
C12—C7—H7108.1C9—C16—H16A109.5
C6—C7—H7108.1C9—C16—H16B109.5
C8—C7—H7108.1H16A—C16—H16B109.5
C17—C8—C9110.78 (12)C9—C16—H16C109.5
C17—C8—C7109.55 (12)H16A—C16—H16C109.5
C9—C8—C7111.98 (12)H16B—C16—H16C109.5
C17—C8—H8108.1O4—C17—O5123.70 (16)
C9—C8—H8108.1O4—C17—C8124.20 (15)
C7—C8—H8108.1O5—C17—C8112.10 (14)
O3—C9—C10105.67 (13)O5—C18—H18A109.5
O3—C9—C16110.09 (13)O5—C18—H18B109.5
C10—C9—C16110.33 (13)H18A—C18—H18B109.5
O3—C9—C8111.62 (12)O5—C18—H18C109.5
C10—C9—C8107.83 (12)H18A—C18—H18C109.5
C16—C9—C8111.13 (14)H18B—C18—H18C109.5
C11—C10—C9114.41 (13)C11—N1—C15126.10 (14)
C11—C10—H10A108.7C11—N1—H1A117.0
C9—C10—H10A108.7C15—N1—H1A117.0
C11—C10—H10B108.7C13—O2—C14116.46 (14)
C9—C10—H10B108.7C9—O3—H4A109.5
H10A—C10—H10B107.6C17—O5—C18116.35 (16)
C6—C1—C2—C31.1 (3)C8—C9—C10—C1149.17 (18)
C6—C1—C2—Cl1−178.36 (12)C9—C10—C11—N1161.63 (14)
C1—C2—C3—C4−0.7 (3)C9—C10—C11—C12−17.9 (2)
Cl1—C2—C3—C4178.76 (17)N1—C11—C12—C13−6.3 (2)
C2—C3—C4—C50.4 (3)C10—C11—C12—C13173.14 (14)
C3—C4—C5—C6−0.6 (3)N1—C11—C12—C7177.30 (14)
C2—C1—C6—C5−1.2 (2)C10—C11—C12—C7−3.2 (2)
C2—C1—C6—C7175.25 (15)C6—C7—C12—C11−130.26 (16)
C4—C5—C6—C11.0 (3)C8—C7—C12—C11−9.5 (2)
C4—C5—C6—C7−175.46 (17)C6—C7—C12—C1353.32 (18)
C1—C6—C7—C1249.45 (19)C8—C7—C12—C13174.13 (13)
C5—C6—C7—C12−134.17 (16)C11—C12—C13—O113.8 (3)
C1—C6—C7—C8−74.57 (17)C7—C12—C13—O1−169.67 (15)
C5—C6—C7—C8101.81 (17)C11—C12—C13—O2−164.39 (14)
C12—C7—C8—C17165.93 (13)C7—C12—C13—O212.1 (2)
C6—C7—C8—C17−69.36 (16)C9—C8—C17—O462.5 (2)
C12—C7—C8—C942.61 (17)C7—C8—C17—O4−61.5 (2)
C6—C7—C8—C9167.32 (12)C9—C8—C17—O5−116.62 (15)
C17—C8—C9—O3−69.40 (16)C7—C8—C17—O5119.35 (15)
C7—C8—C9—O353.22 (16)C12—C11—N1—C15175.24 (17)
C17—C8—C9—C10174.96 (12)C10—C11—N1—C15−4.3 (2)
C7—C8—C9—C10−62.42 (16)O1—C13—O2—C143.0 (2)
C17—C8—C9—C1653.92 (17)C12—C13—O2—C14−178.66 (16)
C7—C8—C9—C16176.54 (13)O4—C17—O5—C18−0.7 (3)
O3—C9—C10—C11−70.31 (16)C8—C17—O5—C18178.47 (18)
C16—C9—C10—C11170.72 (14)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O10.862.02.673 (2)134
O3—H4A···O40.822.392.990 (2)131
C15—H15B···O1i0.962.523.327 (3)142
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O10.862.02.673 (2)134
O3—H4A⋯O40.822.392.990 (2)131
C15—H15B⋯O1i0.962.523.327 (3)142

Symmetry code: (i) .

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