Literature DB >> 21754730

4,6-Dichloro-5-(2-meth-oxy-phen-oxy)-2,2'-bipyrimidine.

Tian-Tian Ren1, Zhong Zhang, Cong-Cong Zhong, Zhong-Zhi Yang, Zhan-Wang Shi.   

Abstract

In the title compound, C(15)H(10)Cl(2)N(4)O(2), the dichloro-pyrimidine and meth-oxy-phen-oxy parts are approximately perpendicular [dihedral angle = 89.9 (9)°]. The dihedral angle between the two pyrimidine rings is 36.3 (4)° In the crystal, there are no hydrogen bonds but the mol-ecules are held together by short inter-molecular CN [3.206 (3) Å] contacts and C-H⋯π inter-actions.

Entities:  

Year:  2011        PMID: 21754730      PMCID: PMC3120620          DOI: 10.1107/S160053681101419X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the use of 2,2′-bipyrimidine as a ligand in inorganic and organometallic chemistry, see: Fabrice et al. (2008 ▶); Hunziker & Ludi (1977 ▶). It was first synthesized by Bly and Mellon (1962 ▶) utilizing the Ullmann coupling of 2-bromo­pyrimidine in the presence of metallic copper.

Experimental

Crystal data

C15H10Cl2N4O2 M = 349.17 Monoclinic, a = 10.716 (2) Å b = 8.1112 (18) Å c = 18.601 (5) Å β = 106.486 (3)° V = 1550.3 (6) Å3 Z = 4 Mo Kα radiation μ = 0.43 mm−1 T = 296 K 0.22 × 0.20 × 0.18 mm

Data collection

Siemens SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.911, T max = 0.926 8106 measured reflections 2733 independent reflections 2319 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.114 S = 1.08 2733 reflections 209 parameters H-atom parameters constrained Δρmax = 0.26 e Å−3 Δρmin = −0.54 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053681101419X/fl2331sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681101419X/fl2331Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H10Cl2N4O2F(000) = 712
Mr = 349.17Dx = 1.496 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 10.716 (2) ÅCell parameters from 3720 reflections
b = 8.1112 (18) Åθ = 2.6–27.4°
c = 18.601 (5) ŵ = 0.43 mm1
β = 106.486 (3)°T = 296 K
V = 1550.3 (6) Å3Block, colourless
Z = 40.22 × 0.20 × 0.18 mm
Bruker SMART CCD area-detector diffractometer2733 independent reflections
Radiation source: fine-focus sealed tube2319 reflections with I > 2σ(I)
graphiteRint = 0.027
φ and ω scansθmax = 25.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −12→12
Tmin = 0.911, Tmax = 0.926k = −9→9
8106 measured reflectionsl = −22→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.114H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0522P)2 + 0.7172P] where P = (Fo2 + 2Fc2)/3
2733 reflections(Δ/σ)max = 0.001
209 parametersΔρmax = 0.26 e Å3
0 restraintsΔρmin = −0.54 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl20.35488 (7)0.23438 (8)0.95225 (4)0.0698 (2)
Cl1−0.12322 (6)0.00465 (9)0.81525 (4)0.0697 (2)
O10.09431 (17)0.24803 (18)0.84012 (8)0.0514 (4)
N10.04052 (18)−0.1321 (2)0.93028 (10)0.0461 (4)
O2−0.01418 (17)0.4733 (2)0.74474 (9)0.0564 (4)
N30.25212 (18)−0.0303 (2)0.99122 (9)0.0434 (4)
N20.07696 (19)−0.3406 (2)1.05310 (10)0.0509 (5)
C40.1789 (2)−0.2855 (3)1.03313 (11)0.0394 (5)
C50.1558 (2)−0.1388 (3)0.98205 (11)0.0399 (5)
N40.29885 (19)−0.3461 (2)1.05286 (11)0.0504 (5)
C90.1043 (2)0.2281 (3)0.76750 (11)0.0401 (5)
C80.1164 (2)0.1136 (3)0.88636 (11)0.0437 (5)
C130.0568 (2)0.3436 (3)0.64467 (12)0.0480 (5)
H130.01790.42420.60990.058*
C140.0468 (2)0.3523 (3)0.71727 (11)0.0403 (5)
C120.1243 (2)0.2156 (3)0.62364 (12)0.0512 (6)
H120.13110.21120.57490.061*
C60.2308 (2)0.0942 (3)0.94339 (11)0.0446 (5)
C20.2172 (3)−0.5496 (3)1.11929 (13)0.0580 (6)
H20.2305−0.64381.14900.070*
C15−0.0513 (3)0.6175 (3)0.69994 (17)0.0712 (8)
H15A−0.11140.58800.65280.107*
H15B0.02450.66740.69140.107*
H15C−0.09200.69430.72550.107*
C100.1703 (2)0.1008 (3)0.74643 (12)0.0501 (6)
H100.20760.01850.78060.060*
C110.1813 (2)0.0952 (3)0.67400 (13)0.0537 (6)
H110.22720.01000.65960.064*
C30.0986 (3)−0.4745 (3)1.09680 (13)0.0564 (6)
H30.0303−0.51801.11240.068*
C70.0238 (2)−0.0064 (3)0.88345 (12)0.0457 (5)
C10.3157 (3)−0.4805 (3)1.09624 (14)0.0589 (7)
H10.3978−0.52891.11130.071*
U11U22U33U12U13U23
Cl20.0869 (5)0.0571 (4)0.0554 (4)−0.0231 (3)0.0039 (3)0.0114 (3)
Cl10.0610 (4)0.0732 (5)0.0600 (4)0.0094 (3)−0.0073 (3)0.0149 (3)
O10.0831 (11)0.0397 (9)0.0335 (8)0.0168 (8)0.0197 (8)0.0094 (6)
N10.0521 (11)0.0438 (10)0.0403 (10)0.0047 (8)0.0095 (8)0.0056 (8)
O20.0784 (11)0.0468 (9)0.0461 (9)0.0198 (8)0.0209 (8)0.0144 (7)
N30.0577 (11)0.0390 (10)0.0316 (9)0.0020 (8)0.0094 (8)0.0035 (7)
N20.0617 (12)0.0495 (11)0.0446 (10)0.0045 (9)0.0203 (9)0.0101 (9)
C40.0534 (12)0.0357 (11)0.0291 (10)0.0028 (9)0.0115 (9)−0.0003 (8)
C50.0518 (12)0.0379 (11)0.0307 (10)0.0062 (9)0.0127 (9)0.0015 (8)
N40.0558 (11)0.0447 (11)0.0490 (11)0.0080 (9)0.0121 (9)0.0089 (9)
C90.0471 (11)0.0431 (12)0.0286 (10)−0.0003 (9)0.0084 (8)0.0024 (8)
C80.0639 (14)0.0369 (11)0.0313 (10)0.0119 (10)0.0151 (10)0.0058 (9)
C130.0564 (13)0.0493 (13)0.0362 (11)−0.0062 (10)0.0095 (10)0.0082 (10)
C140.0436 (11)0.0402 (12)0.0357 (11)−0.0011 (9)0.0087 (9)0.0036 (9)
C120.0572 (14)0.0628 (15)0.0355 (12)−0.0119 (11)0.0164 (10)−0.0054 (11)
C60.0624 (13)0.0374 (11)0.0334 (10)−0.0003 (10)0.0124 (10)0.0003 (9)
C20.0844 (18)0.0406 (13)0.0435 (13)0.0036 (12)0.0093 (12)0.0116 (10)
C150.0818 (19)0.0533 (16)0.0810 (19)0.0250 (14)0.0273 (15)0.0276 (14)
C100.0566 (13)0.0499 (14)0.0410 (12)0.0122 (11)0.0090 (10)0.0039 (10)
C110.0554 (13)0.0608 (15)0.0465 (13)0.0065 (12)0.0171 (11)−0.0070 (11)
C30.0767 (17)0.0511 (14)0.0449 (13)−0.0041 (12)0.0228 (12)0.0099 (11)
C70.0530 (13)0.0463 (13)0.0350 (11)0.0105 (10)0.0079 (9)0.0040 (9)
C10.0678 (16)0.0462 (14)0.0581 (15)0.0152 (12)0.0103 (13)0.0121 (11)
Cl2—C61.722 (2)C8—C61.384 (3)
Cl1—C71.722 (2)C13—C121.384 (3)
O1—C81.367 (2)C13—C141.386 (3)
O1—C91.394 (2)C13—H130.9300
N1—C71.320 (3)C12—C111.371 (3)
N1—C51.335 (3)C12—H120.9300
O2—C141.358 (3)C2—C31.364 (4)
O2—C151.426 (3)C2—C11.368 (4)
N3—C61.322 (3)C2—H20.9300
N3—C51.330 (3)C15—H15A0.9600
N2—C41.327 (3)C15—H15B0.9600
N2—C31.337 (3)C15—H15C0.9600
C4—N41.328 (3)C10—C111.386 (3)
C4—C51.498 (3)C10—H100.9300
N4—C11.338 (3)C11—H110.9300
C9—C101.370 (3)C3—H30.9300
C9—C141.393 (3)C1—H10.9300
C8—C71.380 (3)
C8—O1—C9118.03 (16)N3—C6—C8123.3 (2)
C7—N1—C5115.60 (19)N3—C6—Cl2117.29 (17)
C14—O2—C15117.23 (18)C8—C6—Cl2119.36 (17)
C6—N3—C5116.07 (19)C3—C2—C1117.1 (2)
C4—N2—C3115.4 (2)C3—C2—H2121.4
N2—C4—N4127.39 (19)C1—C2—H2121.4
N2—C4—C5116.39 (19)O2—C15—H15A109.5
N4—C4—C5116.22 (19)O2—C15—H15B109.5
N3—C5—N1126.23 (19)H15A—C15—H15B109.5
N3—C5—C4117.52 (18)O2—C15—H15C109.5
N1—C5—C4116.23 (19)H15A—C15—H15C109.5
C4—N4—C1115.1 (2)H15B—C15—H15C109.5
C10—C9—C14121.26 (19)C9—C10—C11119.7 (2)
C10—C9—O1123.52 (18)C9—C10—H10120.1
C14—C9—O1115.15 (18)C11—C10—H10120.1
O1—C8—C7122.9 (2)C12—C11—C10119.8 (2)
O1—C8—C6122.0 (2)C12—C11—H11120.1
C7—C8—C6114.86 (19)C10—C11—H11120.1
C12—C13—C14120.3 (2)N2—C3—C2122.3 (2)
C12—C13—H13119.9N2—C3—H3118.8
C14—C13—H13119.9C2—C3—H3118.8
O2—C14—C13125.57 (19)N1—C7—C8123.9 (2)
O2—C14—C9116.05 (18)N1—C7—Cl1116.80 (18)
C13—C14—C9118.4 (2)C8—C7—Cl1119.30 (16)
C11—C12—C13120.6 (2)N4—C1—C2122.6 (2)
C11—C12—H12119.7N4—C1—H1118.7
C13—C12—H12119.7C2—C1—H1118.7
Cg is the centroid of the C9–C14 ring.
D—H···AD—HH···AD···AD—H···A
C1—H1···Cgi0.932.873.760 (3)161
Table 1

C—H⋯π interactions (Å, °)

Cg is the centroid of the C9–C14 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1⋯Cgi0.932.873.760 (3)161

Symmetry code: (i) .

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