Literature DB >> 21754690

Bis(acetyl-acetonato-κO,O')(pyridine-κN)zinc(II).

Sanjaya Brahma, M Srinidhi, S A Shivashankar, T Narasimhamurthy, R S Rathore.   

Abstract

In the title compound, [Zn(C(5)H(7)O(2))(2)(C(5)H(5)N)], the metal atom has square-pyramidal coordination geometry with the basal plane defined by the four O atoms of the chelating acetyl-acetonate ligands and with the axial position occupied by the pyridine N atom. The crystal packing is characterized by a C-H⋯O hydrogen-bonded ribbon structure approximately parallel to [10[Formula: see text]].

Entities:  

Year:  2011        PMID: 21754690      PMCID: PMC3120430          DOI: 10.1107/S1600536811019854

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Brahma et al. (2008 ▶); Neelgund et al. (2007 ▶); Urs et al. (2001 ▶).

Experimental

Crystal data

[Zn(C5H7O2)2(C5H5N)] M = 342.68 Monoclinic, a = 7.846 (5) Å b = 27.047 (4) Å c = 8.199 (5) Å β = 117.984 (3)° V = 1536.5 (14) Å3 Z = 4 Mo Kα radiation μ = 1.61 mm−1 T = 295 K 0.32 × 0.23 × 0.12 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.64, T max = 0.83 10840 measured reflections 2939 independent reflections 2568 reflections with I > 2σ(I) R int = 0.074

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.106 S = 0.99 2939 reflections 194 parameters H-atom parameters constrained Δρmax = 0.36 e Å−3 Δρmin = −0.74 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT-Plus (Bruker, 2004 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97 and PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811019854/ng5159sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811019854/ng5159Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C5H7O2)2(C5H5N)]F(000) = 712
Mr = 342.68Dx = 1.481 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2570 reflections
a = 7.846 (5) Åθ = 1.5–26°
b = 27.047 (4) ŵ = 1.61 mm1
c = 8.199 (5) ÅT = 295 K
β = 117.984 (3)°Needle, colorless
V = 1536.5 (14) Å30.32 × 0.23 × 0.12 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer2939 independent reflections
Radiation source: fine-focus sealed tube2568 reflections with I > 2σ(I)
graphiteRint = 0.074
φ and ω scansθmax = 26.0°, θmin = 1.5°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −9→9
Tmin = 0.64, Tmax = 0.83k = −33→33
10840 measured reflectionsl = −10→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.106H-atom parameters constrained
S = 0.99w = 1/[σ2(Fo2) + (0.0548P)2] where P = (Fo2 + 2Fc2)/3
2939 reflections(Δ/σ)max = 0.001
194 parametersΔρmax = 0.36 e Å3
0 restraintsΔρmin = −0.74 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C11.0371 (4)0.17049 (11)−0.0161 (4)0.0224 (7)
C20.9678 (5)0.12881 (11)−0.1366 (5)0.0244 (7)
H20.96480.1306−0.25120.029*
C30.9046 (4)0.08575 (11)−0.0895 (4)0.0212 (7)
C41.1147 (5)0.21268 (12)−0.0821 (5)0.0320 (8)
H4A1.05780.2431−0.07150.048*
H4B1.08350.2074−0.20880.048*
H4C1.25240.2144−0.00790.048*
C50.8558 (5)0.04217 (12)−0.2241 (4)0.0309 (8)
H5A0.95420.0173−0.17070.046*
H5B0.84920.0536−0.33790.046*
H5C0.73360.0284−0.24800.046*
C60.5739 (4)0.11064 (12)0.2966 (4)0.0208 (6)
C70.5487 (4)0.16068 (11)0.3209 (4)0.0236 (7)
H70.43730.16950.32710.028*
C80.6730 (4)0.19786 (11)0.3364 (4)0.0221 (7)
C90.4272 (4)0.07458 (12)0.2835 (5)0.0298 (8)
H9A0.39790.05260.18170.045*
H9B0.31230.09180.26430.045*
H9C0.47600.05580.39590.045*
C100.6314 (5)0.25065 (12)0.3684 (5)0.0335 (8)
H10A0.72810.26150.48750.050*
H10B0.50670.25230.36330.050*
H10C0.63290.27160.27450.050*
C111.2801 (4)0.13543 (11)0.6180 (4)0.0221 (7)
H111.27800.16880.58940.026*
C121.4307 (4)0.11783 (13)0.7803 (4)0.0285 (7)
H121.52660.13930.85950.034*
C131.4377 (4)0.06812 (12)0.8242 (4)0.0261 (7)
H131.53850.05570.93220.031*
C141.2931 (4)0.03751 (11)0.7054 (4)0.0238 (7)
H141.29270.00400.73070.029*
C151.1475 (4)0.05834 (11)0.5460 (4)0.0198 (6)
H151.04990.03760.46470.024*
N11.1384 (3)0.10638 (9)0.5017 (3)0.0176 (5)
O11.0419 (3)0.17533 (8)0.1475 (3)0.0242 (5)
O20.8871 (3)0.07874 (8)0.0621 (3)0.0217 (5)
O30.7104 (3)0.09184 (7)0.2837 (3)0.0210 (5)
O40.8203 (3)0.19193 (8)0.3239 (3)0.0263 (5)
Zn10.91346 (4)0.130795 (11)0.25584 (4)0.01638 (14)
U11U22U33U12U13U23
C10.0176 (14)0.0202 (16)0.0358 (17)0.0069 (12)0.0179 (14)0.0082 (13)
C20.0246 (17)0.0297 (19)0.0240 (16)0.0000 (12)0.0156 (14)0.0032 (13)
C30.0099 (13)0.0284 (18)0.0237 (15)−0.0003 (12)0.0066 (12)−0.0032 (13)
C40.0346 (18)0.0235 (18)0.049 (2)0.0021 (14)0.0294 (17)0.0071 (15)
C50.0325 (18)0.0310 (19)0.0335 (18)−0.0077 (14)0.0189 (15)−0.0101 (15)
C60.0128 (14)0.0285 (18)0.0217 (15)0.0005 (12)0.0086 (12)0.0032 (13)
C70.0154 (14)0.0273 (17)0.0314 (16)0.0022 (12)0.0138 (13)−0.0016 (13)
C80.0194 (15)0.0228 (17)0.0247 (15)0.0033 (12)0.0109 (13)−0.0002 (13)
C90.0214 (16)0.0290 (19)0.045 (2)−0.0026 (13)0.0206 (15)0.0002 (15)
C100.0317 (18)0.0261 (19)0.050 (2)0.0026 (14)0.0256 (17)−0.0053 (16)
C110.0168 (15)0.0191 (16)0.0288 (17)−0.0032 (11)0.0095 (14)−0.0016 (12)
C120.0177 (16)0.0283 (18)0.0298 (17)−0.0054 (13)0.0030 (14)−0.0026 (14)
C130.0151 (14)0.0343 (19)0.0226 (15)0.0043 (12)0.0035 (13)0.0038 (14)
C140.0223 (15)0.0200 (16)0.0297 (16)0.0029 (12)0.0128 (13)0.0049 (13)
C150.0152 (14)0.0197 (15)0.0235 (15)−0.0041 (11)0.0082 (12)−0.0016 (12)
N10.0119 (11)0.0196 (13)0.0204 (12)−0.0004 (9)0.0069 (10)−0.0020 (10)
O10.0262 (11)0.0171 (11)0.0339 (12)−0.0033 (8)0.0177 (10)0.0000 (9)
O20.0180 (10)0.0248 (12)0.0246 (11)−0.0059 (8)0.0119 (9)−0.0050 (9)
O30.0141 (10)0.0197 (11)0.0314 (11)−0.0002 (8)0.0126 (9)−0.0009 (9)
O40.0217 (11)0.0194 (12)0.0430 (13)−0.0010 (9)0.0193 (10)−0.0040 (10)
Zn10.0114 (2)0.0171 (2)0.0196 (2)0.00060 (11)0.00634 (16)0.00057 (13)
C1—O11.331 (4)C9—H9B0.9600
C1—C21.428 (4)C9—H9C0.9600
C1—C41.508 (4)C10—H10A0.9600
C2—C31.390 (4)C10—H10B0.9600
C2—H20.9300C10—H10C0.9600
C3—O21.327 (3)C11—N11.329 (4)
C3—C51.535 (4)C11—C121.385 (4)
C4—H4A0.9600C11—H110.9300
C4—H4B0.9600C12—C131.386 (5)
C4—H4C0.9600C12—H120.9300
C5—H5A0.9600C13—C141.373 (4)
C5—H5B0.9600C13—H130.9300
C5—H5C0.9600C14—C151.389 (4)
C6—O31.234 (3)C14—H140.9300
C6—C71.396 (4)C15—N11.342 (4)
C6—C91.473 (4)C15—H150.9300
C7—C81.365 (4)N1—Zn12.068 (2)
C7—H70.9300O1—Zn12.024 (2)
C8—O41.218 (4)O2—Zn12.059 (2)
C8—C101.515 (4)O3—Zn12.011 (2)
C9—H9A0.9600O4—Zn11.991 (2)
O1—C1—C2126.6 (3)C8—C10—H10B109.5
O1—C1—C4117.5 (3)H10A—C10—H10B109.5
C2—C1—C4115.9 (3)C8—C10—H10C109.5
C3—C2—C1122.6 (3)H10A—C10—H10C109.5
C3—C2—H2118.7H10B—C10—H10C109.5
C1—C2—H2118.7N1—C11—C12122.4 (3)
O2—C3—C2126.0 (3)N1—C11—H11118.8
O2—C3—C5117.6 (3)C12—C11—H11118.8
C2—C3—C5116.4 (3)C11—C12—C13119.7 (3)
C1—C4—H4A109.5C11—C12—H12120.2
C1—C4—H4B109.5C13—C12—H12120.2
H4A—C4—H4B109.5C14—C13—C12118.8 (3)
C1—C4—H4C109.5C14—C13—H13120.6
H4A—C4—H4C109.5C12—C13—H13120.6
H4B—C4—H4C109.5C13—C14—C15117.7 (3)
C3—C5—H5A109.5C13—C14—H14121.2
C3—C5—H5B109.5C15—C14—H14121.2
H5A—C5—H5B109.5N1—C15—C14124.3 (3)
C3—C5—H5C109.5N1—C15—H15117.9
H5A—C5—H5C109.5C14—C15—H15117.9
H5B—C5—H5C109.5C11—N1—C15117.2 (3)
O3—C6—C7126.8 (3)C11—N1—Zn1123.7 (2)
O3—C6—C9113.6 (3)C15—N1—Zn1119.05 (19)
C7—C6—C9119.6 (3)C1—O1—Zn1126.83 (19)
C8—C7—C6125.8 (3)C3—O2—Zn1127.44 (19)
C8—C7—H7117.1C6—O3—Zn1124.0 (2)
C6—C7—H7117.1C8—O4—Zn1128.4 (2)
O4—C8—C7124.1 (3)O4—Zn1—O389.35 (9)
O4—C8—C10115.4 (3)O4—Zn1—O187.28 (9)
C7—C8—C10120.5 (3)O3—Zn1—O1161.13 (8)
C6—C9—H9A109.5O4—Zn1—O2150.12 (8)
C6—C9—H9B109.5O3—Zn1—O286.05 (8)
H9A—C9—H9B109.5O1—Zn1—O287.66 (9)
C6—C9—H9C109.5O4—Zn1—N1104.45 (10)
H9A—C9—H9C109.5O3—Zn1—N194.65 (10)
H9B—C9—H9C109.5O1—Zn1—N1104.18 (10)
C8—C10—H10A109.5O2—Zn1—N1105.34 (9)
O1—C1—C2—C3−3.7 (5)C8—O4—Zn1—O3−11.8 (3)
C4—C1—C2—C3175.4 (3)C8—O4—Zn1—O1149.6 (3)
C1—C2—C3—O25.0 (5)C8—O4—Zn1—O269.1 (3)
C1—C2—C3—C5−173.4 (3)C8—O4—Zn1—N1−106.4 (3)
O3—C6—C7—C8−0.6 (5)C6—O3—Zn1—O413.0 (2)
C9—C6—C7—C8179.5 (3)C6—O3—Zn1—O1−66.6 (4)
C6—C7—C8—O42.9 (5)C6—O3—Zn1—O2−137.4 (2)
C6—C7—C8—C10−178.1 (3)C6—O3—Zn1—N1117.5 (2)
N1—C11—C12—C130.9 (5)C1—O1—Zn1—O4−133.7 (2)
C11—C12—C13—C14−0.5 (5)C1—O1—Zn1—O3−53.7 (4)
C12—C13—C14—C150.4 (4)C1—O1—Zn1—O216.8 (2)
C13—C14—C15—N1−0.5 (5)C1—O1—Zn1—N1122.1 (2)
C12—C11—N1—C15−0.9 (4)C3—O2—Zn1—O464.5 (3)
C12—C11—N1—Zn1−178.9 (2)C3—O2—Zn1—O3146.3 (2)
C14—C15—N1—C110.8 (4)C3—O2—Zn1—O1−15.9 (2)
C14—C15—N1—Zn1178.8 (2)C3—O2—Zn1—N1−119.9 (2)
C2—C1—O1—Zn1−11.0 (4)C11—N1—Zn1—O4−48.2 (2)
C4—C1—O1—Zn1169.9 (2)C15—N1—Zn1—O4133.9 (2)
C2—C3—O2—Zn18.4 (4)C11—N1—Zn1—O3−138.7 (2)
C5—C3—O2—Zn1−173.22 (19)C15—N1—Zn1—O343.4 (2)
C7—C6—O3—Zn1−9.9 (4)C11—N1—Zn1—O142.6 (2)
C9—C6—O3—Zn1170.01 (19)C15—N1—Zn1—O1−135.3 (2)
C7—C8—O4—Zn16.3 (5)C11—N1—Zn1—O2134.1 (2)
C10—C8—O4—Zn1−172.8 (2)C15—N1—Zn1—O2−43.8 (2)
D—H···AD—HH···AD···AD—H···A
C13—H13···O2i0.932.503.141 (5)126
C14—H14···O3ii0.932.593.500 (5)165
C4—H4A···O4iii0.962.413.304 (5)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C13—H13⋯O2i0.932.503.141 (5)126
C14—H14⋯O3ii0.932.593.500 (5)165
C4—H4A⋯O4iii0.962.413.304 (5)155

Symmetry codes: (i) ; (ii) ; (iii) .

  4 in total

1.  Adducts of bis(acetylacetonato)zinc(II) with 1,10-phenanthroline and 2,2'-bipyridine.

Authors:  Sanjaya Brahma; H P Sachin; S A Shivashankar; T Narasimhamurthy; R S Rathore
Journal:  Acta Crystallogr C       Date:  2008-02-16       Impact factor: 1.172

2.  Tris(acetylacetonato-kappa(2)O,O')(1,10-phenanthroline-kappa2N,N')erbium(III).

Authors:  Gururaj M Neelgund; S A Shivashankar; T Narasimhamurthy; R S Rathore
Journal:  Acta Crystallogr C       Date:  2007-01-23       Impact factor: 1.172

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

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