Literature DB >> 21754680

Diaqua-(5-carb-oxy-benzene-1,3-di-carboxyl-ato-κO)(4,4'-dimethyl-2,2'-bipyridine-κN,N')zinc.

Chong-Zhen Mei1, Kai-Hui Li, Wen-Wen Shan.   

Abstract

In the title compound, [Zn(C(9)H(4)O(6))(C(12)H(12)N(2))(H(2)O)(2)], the Zn(II) atom is five-coordinated by two N atoms from a 4,4'-dimethyl-2,2'-bipyridine ligand, one O atom from a 5-carb-oxy-benzene-1,3-dicarboxyl-ate ligand and two water mol-ecules in a distorted trigonal-bipyramidal geometry. The complex mol-ecules are linked by inter-molecular O-H⋯O hydrogen bonds and partly overlapping π-π inter-actions [centroid-centroid distance = 4.017 (2) Å] into a three-dimensional supra-molecular network.

Entities:  

Year:  2011        PMID: 21754680      PMCID: PMC3120513          DOI: 10.1107/S1600536811019519

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the network topologies and applications of coordination polymers, see: Maspoch et al. (2007 ▶); Ockwig et al. (2005 ▶); Zang et al. (2006 ▶). For O—H⋯O hydrogen bonds, see: Desiraju et al. (2004 ▶). For π–π inter­actions, see: Zang et al. (2010 ▶).

Experimental

Crystal data

[Zn(C9H4O6)(C12H12N2)(H2O)2] M = 493.76 Triclinic, a = 9.1938 (9) Å b = 10.7978 (8) Å c = 11.5842 (7) Å α = 85.238 (6)° β = 72.960 (7)° γ = 69.760 (8)° V = 1031.40 (16) Å3 Z = 2 Mo Kα radiation μ = 1.24 mm−1 T = 296 K 0.21 × 0.20 × 0.19 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.780, T max = 0.798 7701 measured reflections 3607 independent reflections 3246 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.089 S = 1.05 3607 reflections 292 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.28 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 1999 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811019519/hy2433sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811019519/hy2433Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C9H4O6)(C12H12N2)(H2O)2]Z = 2
Mr = 493.76F(000) = 508
Triclinic, P1Dx = 1.590 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.1938 (9) ÅCell parameters from 4795 reflections
b = 10.7978 (8) Åθ = 3.5–29.1°
c = 11.5842 (7) ŵ = 1.24 mm1
α = 85.238 (6)°T = 296 K
β = 72.960 (7)°Block, colorless
γ = 69.760 (8)°0.21 × 0.20 × 0.19 mm
V = 1031.40 (16) Å3
Bruker APEXII CCD diffractometer3607 independent reflections
Radiation source: fine-focus sealed tube3246 reflections with I > 2σ(I)
graphiteRint = 0.032
φ and ω scansθmax = 25.0°, θmin = 3.5°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −10→10
Tmin = 0.780, Tmax = 0.798k = −12→12
7701 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.089H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0516P)2] where P = (Fo2 + 2Fc2)/3
3607 reflections(Δ/σ)max = 0.009
292 parametersΔρmax = 0.34 e Å3
0 restraintsΔρmin = −0.28 e Å3
xyzUiso*/Ueq
Zn10.29959 (3)0.80971 (2)0.41463 (2)0.02705 (12)
O10.3344 (2)0.21247 (17)0.51057 (18)0.0451 (5)
O20.1654 (2)0.11417 (16)0.62226 (18)0.0417 (5)
O30.1815 (2)0.68960 (16)0.50550 (15)0.0353 (4)
O4−0.0341 (2)0.81358 (16)0.64551 (17)0.0442 (5)
O5−0.4023 (2)0.60517 (15)0.91517 (15)0.0378 (4)
H5A−0.48100.59910.96840.057*
O6−0.3417 (2)0.38720 (15)0.90916 (15)0.0377 (4)
O1W0.34722 (19)0.87467 (15)0.55069 (14)0.0310 (4)
H1WA0.44740.86050.53490.046*
H1WB0.29200.95510.56680.046*
O2W0.1124 (2)0.92769 (15)0.35858 (16)0.0380 (4)
H2WA0.02540.91060.37650.057*
H2WB0.09121.01010.35810.057*
N10.4831 (2)0.64334 (18)0.31684 (17)0.0294 (4)
N20.4584 (2)0.89292 (18)0.27789 (18)0.0313 (5)
C10.2061 (3)0.2140 (2)0.5853 (2)0.0295 (5)
C20.0560 (3)0.7072 (2)0.5941 (2)0.0277 (5)
C3−0.3103 (3)0.4905 (2)0.8723 (2)0.0257 (5)
C40.0878 (3)0.3468 (2)0.6388 (2)0.0244 (5)
C5−0.0533 (3)0.3572 (2)0.7292 (2)0.0261 (5)
H5−0.07700.28160.75900.031*
C6−0.1601 (3)0.4811 (2)0.7756 (2)0.0254 (5)
C7−0.1244 (3)0.5936 (2)0.73168 (19)0.0246 (5)
H7−0.19550.67590.76350.030*
C80.0167 (3)0.5847 (2)0.6404 (2)0.0241 (5)
C90.1210 (3)0.4604 (2)0.5950 (2)0.0256 (5)
H90.21540.45320.53370.031*
C100.4961 (3)0.5176 (2)0.3444 (2)0.0352 (6)
H100.41840.50140.41010.042*
C110.6183 (3)0.4113 (2)0.2805 (2)0.0378 (6)
H110.62140.32590.30270.045*
C120.7357 (3)0.4315 (2)0.1840 (2)0.0341 (6)
C130.8735 (4)0.3183 (3)0.1126 (3)0.0495 (7)
H13A0.93770.26850.16380.074*
H13B0.93940.35190.04630.074*
H13C0.83130.26210.08210.074*
C140.7234 (3)0.5617 (2)0.1547 (2)0.0319 (6)
H140.80020.57940.08940.038*
C150.5972 (3)0.6652 (2)0.2222 (2)0.0269 (5)
C160.5789 (3)0.8062 (2)0.1965 (2)0.0278 (5)
C170.6761 (3)0.8476 (2)0.0971 (2)0.0374 (6)
H170.75600.78550.04090.045*
C180.6557 (3)0.9805 (2)0.0801 (2)0.0384 (6)
C190.7596 (4)1.0268 (3)−0.0278 (3)0.0604 (9)
H19A0.85311.0303−0.00910.091*
H19B0.69901.1132−0.04890.091*
H19C0.79300.9666−0.09460.091*
C200.5346 (3)1.0673 (3)0.1677 (3)0.0436 (7)
H200.51781.15740.16160.052*
C210.4393 (3)1.0211 (2)0.2634 (2)0.0398 (6)
H210.35811.08150.32040.048*
U11U22U33U12U13U23
Zn10.02375 (18)0.02181 (17)0.03013 (18)−0.00935 (12)0.00191 (12)0.00227 (11)
O10.0236 (10)0.0374 (10)0.0601 (12)−0.0075 (8)0.0085 (9)−0.0093 (9)
O20.0267 (9)0.0214 (8)0.0687 (13)−0.0072 (7)−0.0004 (9)−0.0071 (8)
O30.0319 (10)0.0301 (9)0.0400 (10)−0.0185 (7)0.0036 (8)0.0062 (7)
O40.0418 (11)0.0204 (8)0.0559 (12)−0.0106 (8)0.0066 (9)0.0036 (8)
O50.0326 (10)0.0273 (9)0.0371 (10)−0.0088 (8)0.0132 (8)−0.0019 (7)
O60.0350 (10)0.0280 (9)0.0419 (10)−0.0160 (8)0.0064 (8)0.0056 (8)
O1W0.0220 (9)0.0236 (8)0.0419 (10)−0.0063 (7)−0.0016 (8)−0.0038 (7)
O2W0.0299 (10)0.0224 (8)0.0614 (12)−0.0118 (7)−0.0109 (9)0.0087 (8)
N10.0298 (11)0.0249 (10)0.0308 (10)−0.0114 (8)−0.0025 (9)0.0018 (8)
N20.0269 (11)0.0269 (10)0.0334 (11)−0.0088 (9)0.0008 (9)0.0014 (9)
C10.0227 (13)0.0257 (12)0.0387 (14)−0.0066 (10)−0.0073 (11)−0.0044 (10)
C20.0272 (13)0.0243 (12)0.0321 (13)−0.0128 (10)−0.0062 (11)0.0086 (10)
C30.0262 (12)0.0240 (12)0.0236 (11)−0.0099 (10)−0.0011 (10)0.0021 (9)
C40.0211 (12)0.0230 (11)0.0294 (12)−0.0099 (9)−0.0048 (10)0.0009 (9)
C50.0281 (13)0.0202 (11)0.0304 (12)−0.0121 (10)−0.0052 (10)0.0046 (9)
C60.0237 (12)0.0256 (11)0.0258 (11)−0.0107 (10)−0.0033 (10)0.0029 (9)
C70.0232 (12)0.0196 (11)0.0270 (12)−0.0075 (9)−0.0008 (10)0.0003 (9)
C80.0220 (12)0.0240 (11)0.0256 (11)−0.0099 (9)−0.0040 (10)0.0037 (9)
C90.0198 (12)0.0273 (12)0.0286 (12)−0.0122 (9)−0.0004 (10)0.0016 (10)
C100.0410 (15)0.0290 (13)0.0341 (13)−0.0167 (11)−0.0040 (12)0.0064 (11)
C110.0471 (17)0.0233 (12)0.0422 (15)−0.0103 (11)−0.0149 (13)0.0060 (11)
C120.0369 (15)0.0291 (13)0.0359 (14)−0.0065 (11)−0.0144 (12)−0.0011 (11)
C130.0533 (19)0.0326 (14)0.0516 (17)−0.0004 (13)−0.0134 (15)−0.0062 (13)
C140.0288 (14)0.0317 (13)0.0305 (13)−0.0088 (10)−0.0033 (11)0.0012 (10)
C150.0244 (12)0.0296 (12)0.0249 (12)−0.0096 (10)−0.0043 (10)0.0030 (10)
C160.0250 (13)0.0258 (12)0.0303 (12)−0.0090 (10)−0.0050 (10)0.0033 (10)
C170.0323 (14)0.0343 (13)0.0343 (14)−0.0098 (11)0.0054 (12)0.0006 (11)
C180.0371 (15)0.0327 (13)0.0425 (15)−0.0160 (12)−0.0046 (12)0.0101 (12)
C190.063 (2)0.0489 (18)0.062 (2)−0.0310 (16)0.0061 (17)0.0128 (16)
C200.0425 (16)0.0268 (13)0.0559 (17)−0.0132 (12)−0.0060 (14)0.0082 (12)
C210.0383 (15)0.0256 (12)0.0456 (15)−0.0087 (11)0.0008 (13)−0.0008 (11)
Zn1—O1W1.9922 (16)C7—C81.392 (3)
Zn1—O2W2.0018 (16)C7—H70.9300
Zn1—O32.0115 (16)C8—C91.389 (3)
Zn1—N12.1159 (19)C9—H90.9300
Zn1—N22.1826 (19)C10—C111.374 (4)
O1—C11.238 (3)C10—H100.9300
O2—C11.262 (3)C11—C121.370 (4)
O3—C21.268 (3)C11—H110.9300
O4—C21.235 (3)C12—C141.391 (3)
O5—C31.275 (3)C12—C131.506 (4)
O5—H5A0.8200C13—H13A0.9600
O6—C31.257 (3)C13—H13B0.9600
O1W—H1WA0.8444C13—H13C0.9600
O1W—H1WB0.8446C14—C151.387 (3)
O2W—H2WA0.8460C14—H140.9300
O2W—H2WB0.8421C15—C161.487 (3)
N1—C101.341 (3)C16—C171.382 (3)
N1—C151.346 (3)C17—C181.386 (3)
N2—C211.336 (3)C17—H170.9300
N2—C161.346 (3)C18—C201.386 (4)
C1—C41.516 (3)C18—C191.501 (4)
C2—C81.505 (3)C19—H19A0.9600
C3—C61.480 (3)C19—H19B0.9600
C4—C51.384 (3)C19—H19C0.9600
C4—C91.386 (3)C20—C211.374 (4)
C5—C61.394 (3)C20—H200.9300
C5—H50.9300C21—H210.9300
C6—C71.384 (3)
O1W—Zn1—O2W117.76 (7)C7—C8—C2120.5 (2)
O1W—Zn1—O399.49 (7)C4—C9—C8121.6 (2)
O2W—Zn1—O394.51 (7)C4—C9—H9119.2
O1W—Zn1—N1115.84 (7)C8—C9—H9119.2
O2W—Zn1—N1124.77 (8)N1—C10—C11123.3 (2)
O3—Zn1—N189.06 (7)N1—C10—H10118.3
O1W—Zn1—N293.17 (7)C11—C10—H10118.3
O2W—Zn1—N289.03 (7)C12—C11—C10119.9 (2)
O3—Zn1—N2163.37 (7)C12—C11—H11120.1
N1—Zn1—N275.66 (7)C10—C11—H11120.1
C2—O3—Zn1133.53 (15)C11—C12—C14117.2 (2)
C3—O5—H5A109.5C11—C12—C13121.7 (2)
Zn1—O1W—H1WA110.1C14—C12—C13121.0 (2)
Zn1—O1W—H1WB111.0C12—C13—H13A109.5
H1WA—O1W—H1WB112.2C12—C13—H13B109.5
Zn1—O2W—H2WA119.9H13A—C13—H13B109.5
Zn1—O2W—H2WB120.2C12—C13—H13C109.5
H2WA—O2W—H2WB109.6H13A—C13—H13C109.5
C10—N1—C15117.7 (2)H13B—C13—H13C109.5
C10—N1—Zn1124.60 (16)C15—C14—C12120.5 (2)
C15—N1—Zn1117.70 (14)C15—C14—H14119.7
C21—N2—C16118.1 (2)C12—C14—H14119.7
C21—N2—Zn1125.98 (17)N1—C15—C14121.4 (2)
C16—N2—Zn1115.76 (15)N1—C15—C16115.7 (2)
O1—C1—O2125.7 (2)C14—C15—C16123.0 (2)
O1—C1—C4117.5 (2)N2—C16—C17121.5 (2)
O2—C1—C4116.8 (2)N2—C16—C15114.79 (19)
O4—C2—O3126.4 (2)C17—C16—C15123.7 (2)
O4—C2—C8118.0 (2)C16—C17—C18120.8 (2)
O3—C2—C8115.6 (2)C16—C17—H17119.6
O6—C3—O5123.0 (2)C18—C17—H17119.6
O6—C3—C6119.6 (2)C17—C18—C20116.4 (2)
O5—C3—C6117.45 (19)C17—C18—C19121.4 (2)
C5—C4—C9119.4 (2)C20—C18—C19122.2 (2)
C5—C4—C1121.50 (19)C18—C19—H19A109.5
C9—C4—C1119.1 (2)C18—C19—H19B109.5
C4—C5—C6119.9 (2)H19A—C19—H19B109.5
C4—C5—H5120.0C18—C19—H19C109.5
C6—C5—H5120.0H19A—C19—H19C109.5
C7—C6—C5120.0 (2)H19B—C19—H19C109.5
C7—C6—C3120.7 (2)C21—C20—C18120.3 (2)
C5—C6—C3119.27 (19)C21—C20—H20119.8
C6—C7—C8120.7 (2)C18—C20—H20119.8
C6—C7—H7119.6N2—C21—C20122.7 (2)
C8—C7—H7119.6N2—C21—H21118.6
C9—C8—C7118.4 (2)C20—C21—H21118.6
C9—C8—C2121.1 (2)
O1W—Zn1—O3—C257.8 (2)O4—C2—C8—C9−173.5 (2)
O2W—Zn1—O3—C2−61.4 (2)O3—C2—C8—C95.7 (3)
N1—Zn1—O3—C2173.8 (2)O4—C2—C8—C75.3 (3)
N2—Zn1—O3—C2−163.2 (2)O3—C2—C8—C7−175.5 (2)
O1W—Zn1—N1—C1089.3 (2)C5—C4—C9—C80.6 (3)
O2W—Zn1—N1—C10−105.6 (2)C1—C4—C9—C8179.8 (2)
O3—Zn1—N1—C10−10.8 (2)C7—C8—C9—C4−0.3 (3)
N2—Zn1—N1—C10175.8 (2)C2—C8—C9—C4178.6 (2)
O1W—Zn1—N1—C15−88.84 (17)C15—N1—C10—C11−0.6 (4)
O2W—Zn1—N1—C1576.23 (18)Zn1—N1—C10—C11−178.77 (19)
O3—Zn1—N1—C15171.07 (17)N1—C10—C11—C120.7 (4)
N2—Zn1—N1—C15−2.30 (16)C10—C11—C12—C14−0.6 (4)
O1W—Zn1—N2—C21−63.8 (2)C10—C11—C12—C13179.0 (2)
O2W—Zn1—N2—C2154.0 (2)C11—C12—C14—C150.5 (4)
O3—Zn1—N2—C21156.6 (2)C13—C12—C14—C15−179.0 (2)
N1—Zn1—N2—C21−179.6 (2)C10—N1—C15—C140.5 (3)
O1W—Zn1—N2—C16121.32 (17)Zn1—N1—C15—C14178.81 (18)
O2W—Zn1—N2—C16−120.94 (18)C10—N1—C15—C16−179.1 (2)
O3—Zn1—N2—C16−18.3 (4)Zn1—N1—C15—C16−0.8 (3)
N1—Zn1—N2—C165.44 (17)C12—C14—C15—N1−0.5 (4)
Zn1—O3—C2—O43.8 (4)C12—C14—C15—C16179.1 (2)
Zn1—O3—C2—C8−175.34 (15)C21—N2—C16—C17−3.1 (4)
O1—C1—C4—C5−175.4 (2)Zn1—N2—C16—C17172.22 (19)
O2—C1—C4—C53.9 (3)C21—N2—C16—C15177.2 (2)
O1—C1—C4—C95.5 (3)Zn1—N2—C16—C15−7.5 (3)
O2—C1—C4—C9−175.3 (2)N1—C15—C16—N25.6 (3)
C9—C4—C5—C6−0.3 (3)C14—C15—C16—N2−174.0 (2)
C1—C4—C5—C6−179.5 (2)N1—C15—C16—C17−174.1 (2)
C4—C5—C6—C7−0.3 (3)C14—C15—C16—C176.2 (4)
C4—C5—C6—C3−179.9 (2)N2—C16—C17—C182.2 (4)
O6—C3—C6—C7178.6 (2)C15—C16—C17—C18−178.1 (2)
O5—C3—C6—C7−1.8 (3)C16—C17—C18—C200.2 (4)
O6—C3—C6—C5−1.8 (3)C16—C17—C18—C19−179.6 (3)
O5—C3—C6—C5177.8 (2)C17—C18—C20—C21−1.6 (4)
C5—C6—C7—C80.7 (3)C19—C18—C20—C21178.2 (3)
C3—C6—C7—C8−179.8 (2)C16—N2—C21—C201.7 (4)
C6—C7—C8—C9−0.3 (3)Zn1—N2—C21—C20−173.1 (2)
C6—C7—C8—C2−179.2 (2)C18—C20—C21—N20.7 (4)
D—H···AD—HH···AD···AD—H···A
O5—H5A···O6i0.821.792.603 (2)171
O1W—H1WA···O1ii0.841.812.635 (2)165
O1W—H1WB···O2iii0.841.752.593 (2)171
O2W—H2WA···O2iv0.851.862.688 (2)166
O2W—H2WB···O4v0.841.792.633 (2)176
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H5A⋯O6i0.821.792.603 (2)171
O1W—H1WA⋯O1ii0.841.812.635 (2)165
O1W—H1WB⋯O2iii0.841.752.593 (2)171
O2W—H2WA⋯O2iv0.851.862.688 (2)166
O2W—H2WB⋯O4v0.841.792.633 (2)176

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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2.  Assemblies of a new flexible multicarboxylate ligand and d10 metal centers toward the construction of homochiral helical coordination polymers: structures, luminescence, and NLO-active properties.

Authors:  Shuangquan Zang; Yang Su; Yizhi Li; Zhaoping Ni; Qingjin Meng
Journal:  Inorg Chem       Date:  2006-01-09       Impact factor: 5.165

3.  Old materials with new tricks: multifunctional open-framework materials.

Authors:  Daniel Maspoch; Daniel Ruiz-Molina; Jaume Veciana
Journal:  Chem Soc Rev       Date:  2007-02-08       Impact factor: 54.564

4.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

5.  Divalent zinc and cadmium coordination polymers of a new flexible tetracarboxylate ligand: syntheses, crystal structures and properties.

Authors:  Shuang-Quan Zang; Ran Liang; Ya-Juan Fan; Hong-Wei Hou; Thomas C W Mak
Journal:  Dalton Trans       Date:  2010-07-26       Impact factor: 4.390

  5 in total

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