Literature DB >> 21754664

Diaqua-bis-(2-oxo-2H-chromene-3-carboxyl-ato)copper(II).

Yue Cui1, Qian Gao, Huan-Huan Wang, Lin Wang, Ya-Bo Xie.   

Abstract

In the title compound, [Cu(C(10)H(5)O(4))(2)(H(2)O)(2)], the Cu(II) atom lies on a crystallographic inversion center and exhibits an octa-hedral coordination defined by two O atoms from water mol-ecules in the axial positions and by four O atoms from two deprotonated coumarin-3-carb-oxy-lic acid ligands in the equatorial positions. The angles around the Cu(II) atom vary between 85.32 (6) and 94.68 (6)°. The Cu-O bond distances between the Cu(II) atom and the O atoms vary between 1.9424 (14) and 2.3229 (15) Å. The layers inter-digitate via face-to-face aromatic inter-actions [3.6490 (8) Å] between coumarin moieties such that the inter-layer separation is 10.460 (2) Å, i.e. the length of the c axis. O-H⋯O hydrogen bonds between the H atoms of coordinated water mol-ecules and the O atoms of carboxyl-ate groups link the complex mol-ecules into layers parallel to the ab plane.

Entities:  

Year:  2011        PMID: 21754664      PMCID: PMC3120618          DOI: 10.1107/S1600536811018708

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to topological networks, see: Laza­rou et al. (2011 ▶). For applications of copper(II) complexes, see: Eddaoudi et al. (2001 ▶); Kirillov et al. (2010 ▶); Konidaris et al. (2009 ▶). For related structures, see: Wang et al. (2011 ▶).

Experimental

Crystal data

[Cu(C10H5O4)2(H2O)2] M = 477.86 Triclinic, a = 6.5884 (13) Å b = 6.8296 (14) Å c = 10.460 (2) Å α = 85.98 (3)° β = 89.79 (3)° γ = 65.38 (3)° V = 426.65 (15) Å3 Z = 1 Mo Kα radiation μ = 1.35 mm−1 T = 293 K 0.20 × 0.15 × 0.15 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2008a ▶) T min = 0.785, T max = 0.817 2696 measured reflections 1954 independent reflections 1926 reflections with I > 2σ(I) R int = 0.014

Refinement

R[F 2 > 2σ(F 2)] = 0.026 wR(F 2) = 0.080 S = 1.10 1954 reflections 146 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.47 e Å−3 Δρmin = −0.59 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008b ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008b ▶); molecular graphics: SHELXTL (Sheldrick, 2008b ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811018708/zk2008sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811018708/zk2008Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C10H5O4)2(H2O)2]Z = 1
Mr = 477.86F(000) = 243
Triclinic, P1Dx = 1.860 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.5884 (13) ÅCell parameters from 2273 reflections
b = 6.8296 (14) Åθ = 3.3–28.3°
c = 10.460 (2) ŵ = 1.35 mm1
α = 85.98 (3)°T = 293 K
β = 89.79 (3)°Block, green
γ = 65.38 (3)°0.20 × 0.15 × 0.15 mm
V = 426.65 (15) Å3
Bruker APEXII CCD diffractometer1954 independent reflections
Radiation source: fine-focus sealed tube1926 reflections with I > 2σ(I)
graphiteRint = 0.014
φ and ω scansθmax = 28.3°, θmin = 3.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 2008a)h = −8→8
Tmin = 0.785, Tmax = 0.817k = −6→8
2696 measured reflectionsl = −12→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.026Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.080H atoms treated by a mixture of independent and constrained refinement
S = 1.10w = 1/[σ2(Fo2) + (0.0426P)2 + 0.4127P] where P = (Fo2 + 2Fc2)/3
1954 reflections(Δ/σ)max < 0.001
146 parametersΔρmax = 0.47 e Å3
0 restraintsΔρmin = −0.59 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.50000.00000.50000.00966 (11)
O10.4519 (2)0.1657 (2)0.69122 (12)0.0146 (3)
O1W0.4903 (2)−0.2639 (2)0.59038 (12)0.0126 (3)
H1WA0.3929−0.29000.55680.019*
O30.1764 (2)0.1397 (2)0.48277 (12)0.0124 (3)
O4−0.1736 (2)0.3644 (2)0.51356 (12)0.0127 (3)
O20.3051 (2)0.1949 (2)0.88105 (12)0.0122 (3)
C1−0.2504 (3)0.2859 (3)1.00004 (18)0.0135 (3)
H1A−0.39040.30430.96990.016*
C2−0.2116 (3)0.2857 (3)1.13001 (18)0.0155 (4)
H2A−0.32640.30681.18690.019*
C3−0.0782 (3)0.2581 (3)0.91346 (17)0.0112 (3)
C40.1306 (3)0.2267 (3)0.96207 (17)0.0113 (3)
C50.1731 (3)0.2237 (3)1.09260 (17)0.0139 (3)
H5A0.31380.20191.12310.017*
C60.0000 (3)0.2539 (3)1.17600 (17)0.0154 (4)
H6A0.02490.25301.26350.019*
C7−0.1071 (3)0.2648 (3)0.77726 (17)0.0111 (3)
H7A−0.24570.28710.74290.013*
C80.2831 (3)0.1975 (3)0.75042 (17)0.0110 (3)
C90.0633 (3)0.2392 (3)0.69730 (17)0.0103 (3)
C100.0214 (3)0.2495 (3)0.55452 (17)0.0103 (3)
H1WB0.614 (5)−0.377 (5)0.577 (3)0.035 (8)*
U11U22U33U12U13U23
Cu10.00616 (16)0.01127 (16)0.00921 (16)−0.00141 (11)0.00012 (10)−0.00028 (11)
O10.0097 (6)0.0224 (7)0.0120 (6)−0.0065 (5)0.0005 (5)−0.0029 (5)
O1W0.0094 (6)0.0135 (6)0.0130 (6)−0.0029 (5)−0.0002 (5)−0.0003 (5)
O30.0089 (6)0.0157 (6)0.0103 (6)−0.0025 (5)−0.0001 (5)−0.0018 (5)
O40.0086 (6)0.0143 (6)0.0127 (6)−0.0022 (5)−0.0018 (5)−0.0006 (5)
O20.0096 (6)0.0166 (6)0.0098 (6)−0.0050 (5)−0.0007 (5)−0.0010 (5)
C10.0118 (8)0.0129 (8)0.0143 (8)−0.0039 (6)0.0025 (7)−0.0001 (6)
C20.0183 (9)0.0130 (8)0.0132 (8)−0.0046 (7)0.0052 (7)−0.0004 (6)
C30.0112 (8)0.0095 (7)0.0113 (8)−0.0029 (6)0.0010 (6)−0.0004 (6)
C40.0121 (8)0.0096 (7)0.0106 (8)−0.0030 (6)0.0017 (6)−0.0007 (6)
C50.0157 (9)0.0124 (8)0.0120 (8)−0.0044 (7)−0.0032 (7)0.0000 (6)
C60.0221 (10)0.0123 (8)0.0097 (8)−0.0050 (7)0.0005 (7)−0.0005 (6)
C70.0094 (8)0.0104 (8)0.0122 (8)−0.0031 (6)−0.0005 (6)−0.0003 (6)
C80.0113 (8)0.0102 (7)0.0103 (8)−0.0033 (6)−0.0012 (6)−0.0006 (6)
C90.0091 (8)0.0100 (7)0.0107 (8)−0.0030 (6)−0.0009 (6)−0.0005 (6)
C100.0092 (8)0.0099 (7)0.0117 (8)−0.0039 (6)0.0007 (6)−0.0001 (6)
Cu1—O3i1.9424 (14)C1—C31.408 (2)
Cu1—O31.9424 (14)C1—H1A0.9300
Cu1—O1Wi2.0007 (14)C2—C61.400 (3)
Cu1—O1W2.0007 (14)C2—H2A0.9300
Cu1—O12.3229 (15)C3—C41.393 (3)
Cu1—O1i2.3229 (15)C3—C71.433 (2)
O1—C81.216 (2)C4—C51.392 (2)
O1W—H1WA0.8200C5—C61.388 (3)
O1W—H1WB0.88 (3)C5—H5A0.9300
O3—C101.266 (2)C6—H6A0.9300
O4—C101.251 (2)C7—C91.357 (2)
O2—C81.373 (2)C7—H7A0.9300
O2—C41.377 (2)C8—C91.459 (2)
C1—C21.384 (3)C9—C101.511 (2)
O3i—Cu1—O3180.0C6—C2—H2A119.9
O3i—Cu1—O1Wi91.47 (6)C4—C3—C1118.49 (16)
O3—Cu1—O1Wi88.53 (6)C4—C3—C7118.02 (16)
O3i—Cu1—O1W88.53 (6)C1—C3—C7123.47 (17)
O3—Cu1—O1W91.47 (6)O2—C4—C5117.36 (16)
O1Wi—Cu1—O1W180.0O2—C4—C3120.44 (16)
O3i—Cu1—O194.68 (6)C5—C4—C3122.19 (17)
O3—Cu1—O185.32 (6)C6—C5—C4118.29 (18)
O1Wi—Cu1—O188.76 (6)C6—C5—H5A120.9
O1W—Cu1—O191.24 (6)C4—C5—H5A120.9
O3i—Cu1—O1i85.32 (6)C5—C6—C2120.83 (17)
O3—Cu1—O1i94.68 (6)C5—C6—H6A119.6
O1Wi—Cu1—O1i91.24 (6)C2—C6—H6A119.6
O1W—Cu1—O1i88.76 (6)C9—C7—C3121.45 (17)
O1—Cu1—O1i180.0C9—C7—H7A119.3
C8—O1—Cu1118.65 (12)C3—C7—H7A119.3
Cu1—O1W—H1WA109.5O1—C8—O2115.47 (16)
Cu1—O1W—H1WB110 (2)O1—C8—C9127.02 (16)
H1WA—O1W—H1WB103.7O2—C8—C9117.51 (15)
C10—O3—Cu1134.40 (12)C7—C9—C8119.69 (16)
C8—O2—C4122.81 (14)C7—C9—C10118.84 (16)
C2—C1—C3120.02 (18)C8—C9—C10121.45 (15)
C2—C1—H1A120.0O4—C10—O3122.88 (16)
C3—C1—H1A120.0O4—C10—C9116.53 (15)
C1—C2—C6120.16 (17)O3—C10—C9120.53 (16)
C1—C2—H2A119.9
O3i—Cu1—O1—C8−149.14 (14)C1—C2—C6—C50.5 (3)
O3—Cu1—O1—C830.86 (14)C4—C3—C7—C90.7 (3)
O1Wi—Cu1—O1—C8119.49 (14)C1—C3—C7—C9179.37 (17)
O1W—Cu1—O1—C8−60.51 (14)Cu1—O1—C8—O2149.88 (11)
O1Wi—Cu1—O3—C10−95.25 (17)Cu1—O1—C8—C9−30.6 (2)
O1W—Cu1—O3—C1084.75 (17)C4—O2—C8—O1−179.60 (15)
O1—Cu1—O3—C10−6.37 (17)C4—O2—C8—C90.9 (2)
O1i—Cu1—O3—C10173.63 (17)C3—C7—C9—C81.8 (3)
C3—C1—C2—C6−1.2 (3)C3—C7—C9—C10−179.55 (15)
C2—C1—C3—C41.2 (3)O1—C8—C9—C7177.91 (18)
C2—C1—C3—C7−177.46 (16)O2—C8—C9—C7−2.6 (2)
C8—O2—C4—C5−179.00 (15)O1—C8—C9—C10−0.7 (3)
C8—O2—C4—C31.7 (3)O2—C8—C9—C10178.83 (15)
C1—C3—C4—O2178.78 (15)Cu1—O3—C10—O4163.62 (13)
C7—C3—C4—O2−2.5 (3)Cu1—O3—C10—C9−19.1 (3)
C1—C3—C4—C5−0.5 (3)C7—C9—C10—O428.9 (2)
C7—C3—C4—C5178.26 (16)C8—C9—C10—O4−152.53 (17)
O2—C4—C5—C6−179.54 (16)C7—C9—C10—O3−148.55 (17)
C3—C4—C5—C6−0.2 (3)C8—C9—C10—O330.0 (2)
C4—C5—C6—C20.3 (3)
D—H···AD—HH···AD···AD—H···A
O1W—H1WA···O4ii0.821.892.706 (2)177
O1W—H1WB···O4iii0.88 (3)1.90 (3)2.753 (2)163 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1WA⋯O4i0.821.892.706 (2)177
O1W—H1WB⋯O4ii0.88 (3)1.90 (3)2.753 (2)163 (3)

Symmetry codes: (i) ; (ii) .

  3 in total

1.  Porous metal-organic polyhedra: 25 A cuboctahedron constructed from 12 Cu2(CO2)4 paddle-wheel building blocks.

Authors:  M Eddaoudi; J Kim; J B Wachter; H K Chae; M O'Keeffe; O M Yaghi
Journal:  J Am Chem Soc       Date:  2001-05-09       Impact factor: 15.419

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Bringing an "old" biological buffer to coordination chemistry: new 1D and 3D coordination polymers with [Cu(4)(Hbes)(4)] cores for mild hydrocarboxylation of alkanes.

Authors:  Alexander M Kirillov; Jaime A S Coelho; Marina V Kirillova; M Fátima C Guedes da Silva; Dmytro S Nesterov; Katrin R Gruenwald; Matti Haukka; Armando J L Pombeiro
Journal:  Inorg Chem       Date:  2010-07-19       Impact factor: 5.165

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.