| Literature DB >> 21754657 |
John C Thomas, Edward R T Tiekink, Judith A Walmsley.
Abstract
The Pd(II) atom in the complex cation of the title compound, [PdCl(C(21)H(16)N(4))]Cl, is coordinated by three N atoms derived from the terpyridine ligand and a chloride ion, which define a distorted PdClN(3) square-planar coordination geometry. In the crystal, the presence of N-H⋯Cl hydrogen bonds involving the amino H atom and chloride anions link two cations and two anions into a four-ion aggregate via centrosymmetric eight-membered [⋯H-N-H⋯Cl](2) synthons. Layers of cations are inter-spersed with the chloride anions with stabilization provided by C-H⋯Cl inter-actions involving both Cl atoms, as well as π-π inter-actions [the closest inter-action of 3.489 (6) Å occurs between a chelate ring and a pyridyl residue].Entities:
Year: 2011 PMID: 21754657 PMCID: PMC3120294 DOI: 10.1107/S1600536811018125
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [PdCl(C21H16N4)]Cl | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 7657 reflections |
| θ = 2.1–30.3° | |
| µ = 1.29 mm−1 | |
| β = 105.215 (6)° | Prism, red |
| 0.10 × 0.04 × 0.04 mm | |
| Rigaku AFC12/SATURN724 diffractometer | 3296 independent reflections |
| Radiation source: fine-focus sealed tube | 2809 reflections with |
| graphite | |
| ω scans | θmax = 25.0°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 15599 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3296 reflections | (Δ/σ)max < 0.001 |
| 259 parameters | Δρmax = 3.59 e Å−3 |
| 3 restraints | Δρmin = −2.15 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Pd | 0.52238 (8) | 0.61084 (7) | −0.12448 (6) | 0.0406 (4) | |
| Cl1 | 0.3256 (3) | 0.6393 (3) | −0.2332 (2) | 0.0602 (9) | |
| Cl2 | 1.5657 (3) | 0.6930 (2) | 0.4574 (2) | 0.0521 (8) | |
| N1 | 0.5776 (9) | 0.7570 (7) | −0.0888 (7) | 0.042 (2) | |
| N2 | 0.6866 (8) | 0.5872 (7) | −0.0316 (6) | 0.037 (2) | |
| N3 | 0.5215 (8) | 0.4571 (7) | −0.1273 (6) | 0.038 (2) | |
| N4 | 1.4174 (9) | 0.4831 (8) | 0.3621 (7) | 0.044 (2) | |
| H1N | 1.469 (9) | 0.534 (5) | 0.387 (7) | 0.053* | |
| H2N | 1.428 (11) | 0.435 (5) | 0.408 (6) | 0.053* | |
| C1 | 0.5076 (12) | 0.8421 (10) | −0.1202 (9) | 0.051 (3) | |
| H1 | 0.4249 | 0.8365 | −0.1656 | 0.061* | |
| C2 | 0.5559 (14) | 0.9367 (9) | −0.0865 (10) | 0.053 (3) | |
| H2 | 0.5049 | 0.9954 | −0.1074 | 0.063* | |
| C3 | 0.6765 (15) | 0.9472 (10) | −0.0233 (10) | 0.057 (4) | |
| H3 | 0.7108 | 1.0125 | −0.0021 | 0.068* | |
| C4 | 0.7472 (13) | 0.8592 (8) | 0.0090 (9) | 0.047 (3) | |
| H4 | 0.8303 | 0.8637 | 0.0539 | 0.056* | |
| C5 | 0.6961 (11) | 0.7660 (8) | −0.0245 (8) | 0.040 (3) | |
| C6 | 0.7595 (11) | 0.6664 (8) | 0.0078 (8) | 0.037 (2) | |
| C7 | 0.8789 (11) | 0.6510 (8) | 0.0711 (8) | 0.038 (3) | |
| H7 | 0.9300 | 0.7078 | 0.0993 | 0.045* | |
| C8 | 0.9263 (10) | 0.5522 (7) | 0.0949 (8) | 0.033 (2) | |
| C9 | 0.8437 (10) | 0.4710 (8) | 0.0530 (7) | 0.032 (2) | |
| H9 | 0.8708 | 0.4029 | 0.0690 | 0.038* | |
| C10 | 0.7247 (10) | 0.4895 (8) | −0.0106 (8) | 0.035 (2) | |
| C11 | 0.6283 (9) | 0.4156 (8) | −0.0622 (8) | 0.033 (2) | |
| C12 | 0.4354 (10) | 0.3957 (10) | −0.1824 (8) | 0.043 (3) | |
| H12 | 0.3622 | 0.4250 | −0.2275 | 0.052* | |
| C13 | 0.4449 (11) | 0.2911 (11) | −0.1785 (9) | 0.051 (3) | |
| H13 | 0.3806 | 0.2501 | −0.2211 | 0.061* | |
| C14 | 0.5489 (11) | 0.2470 (9) | −0.1120 (8) | 0.043 (3) | |
| H14 | 0.5565 | 0.1751 | −0.1065 | 0.052* | |
| C15 | 0.6434 (10) | 0.3105 (9) | −0.0527 (8) | 0.038 (3) | |
| H15 | 0.7166 | 0.2822 | −0.0067 | 0.046* | |
| C16 | 1.0522 (11) | 0.5334 (8) | 0.1615 (8) | 0.036 (2) | |
| C17 | 1.0953 (11) | 0.4342 (8) | 0.1970 (8) | 0.037 (2) | |
| H17 | 1.0409 | 0.3775 | 0.1750 | 0.045* | |
| C18 | 1.2149 (10) | 0.4190 (8) | 0.2630 (8) | 0.036 (2) | |
| H18 | 1.2403 | 0.3521 | 0.2860 | 0.044* | |
| C19 | 1.2991 (10) | 0.5001 (9) | 0.2966 (8) | 0.038 (3) | |
| C20 | 1.2611 (10) | 0.5949 (8) | 0.2590 (8) | 0.033 (2) | |
| H20 | 1.3183 | 0.6504 | 0.2784 | 0.040* | |
| C21 | 1.1426 (10) | 0.6120 (8) | 0.1938 (8) | 0.035 (2) | |
| H21 | 1.1208 | 0.6791 | 0.1697 | 0.042* |
| Pd | 0.0386 (6) | 0.0509 (6) | 0.0318 (5) | 0.0157 (4) | 0.0086 (4) | 0.0086 (4) |
| Cl1 | 0.0460 (18) | 0.086 (2) | 0.0437 (17) | 0.0276 (17) | 0.0025 (14) | 0.0096 (16) |
| Cl2 | 0.0496 (17) | 0.0452 (16) | 0.0528 (18) | −0.0137 (13) | −0.0019 (14) | −0.0005 (13) |
| N1 | 0.056 (6) | 0.044 (5) | 0.031 (5) | 0.020 (5) | 0.023 (5) | 0.012 (4) |
| N2 | 0.034 (5) | 0.045 (5) | 0.033 (5) | 0.012 (4) | 0.011 (4) | 0.014 (4) |
| N3 | 0.032 (5) | 0.053 (6) | 0.030 (5) | −0.005 (4) | 0.009 (4) | 0.000 (4) |
| N4 | 0.036 (5) | 0.057 (6) | 0.035 (5) | −0.011 (5) | 0.000 (4) | −0.008 (5) |
| C1 | 0.053 (7) | 0.062 (8) | 0.041 (7) | 0.012 (6) | 0.021 (6) | 0.011 (6) |
| C2 | 0.079 (10) | 0.037 (7) | 0.051 (7) | 0.012 (6) | 0.033 (7) | 0.006 (6) |
| C3 | 0.083 (10) | 0.040 (7) | 0.057 (8) | 0.018 (6) | 0.035 (8) | 0.015 (6) |
| C4 | 0.073 (9) | 0.035 (6) | 0.036 (6) | 0.014 (6) | 0.021 (6) | 0.000 (5) |
| C5 | 0.047 (7) | 0.045 (6) | 0.029 (6) | 0.019 (5) | 0.013 (5) | 0.006 (5) |
| C6 | 0.051 (7) | 0.033 (6) | 0.033 (6) | 0.005 (5) | 0.023 (5) | 0.006 (5) |
| C7 | 0.049 (7) | 0.036 (6) | 0.033 (6) | 0.011 (5) | 0.021 (5) | 0.008 (5) |
| C8 | 0.038 (6) | 0.024 (5) | 0.038 (6) | −0.003 (4) | 0.011 (5) | −0.002 (4) |
| C9 | 0.038 (6) | 0.031 (5) | 0.027 (5) | 0.007 (4) | 0.010 (5) | 0.006 (4) |
| C10 | 0.039 (6) | 0.031 (5) | 0.032 (5) | 0.006 (4) | 0.006 (5) | 0.007 (4) |
| C11 | 0.018 (5) | 0.045 (6) | 0.034 (6) | 0.007 (4) | 0.005 (4) | 0.006 (5) |
| C12 | 0.029 (6) | 0.065 (8) | 0.035 (6) | 0.001 (5) | 0.009 (5) | 0.001 (6) |
| C13 | 0.029 (6) | 0.074 (9) | 0.043 (7) | −0.009 (6) | 0.000 (5) | −0.011 (6) |
| C14 | 0.041 (7) | 0.052 (7) | 0.038 (6) | −0.014 (5) | 0.013 (6) | −0.010 (5) |
| C15 | 0.026 (5) | 0.058 (7) | 0.034 (6) | 0.002 (5) | 0.012 (5) | −0.001 (5) |
| C16 | 0.051 (7) | 0.031 (5) | 0.031 (5) | −0.003 (5) | 0.021 (5) | −0.006 (4) |
| C17 | 0.046 (7) | 0.034 (5) | 0.031 (5) | −0.006 (5) | 0.008 (5) | −0.007 (5) |
| C18 | 0.032 (6) | 0.036 (6) | 0.036 (6) | 0.000 (5) | −0.001 (5) | −0.002 (5) |
| C19 | 0.042 (6) | 0.049 (7) | 0.026 (5) | 0.002 (5) | 0.010 (5) | −0.017 (5) |
| C20 | 0.036 (6) | 0.031 (5) | 0.030 (5) | −0.016 (4) | 0.005 (5) | −0.006 (4) |
| C21 | 0.040 (6) | 0.034 (6) | 0.034 (6) | −0.008 (4) | 0.014 (5) | 0.000 (4) |
| Pd—N1 | 2.034 (10) | C7—H7 | 0.9500 |
| Pd—N2 | 1.922 (9) | C8—C9 | 1.414 (14) |
| Pd—N3 | 2.022 (10) | C8—C16 | 1.451 (16) |
| Pd—Cl1 | 2.290 (3) | C9—C10 | 1.376 (15) |
| N1—C1 | 1.357 (15) | C9—H9 | 0.9500 |
| N1—C5 | 1.359 (15) | C10—C11 | 1.466 (15) |
| N2—C6 | 1.333 (14) | C11—C15 | 1.395 (15) |
| N2—C10 | 1.357 (13) | C12—C13 | 1.379 (17) |
| N3—C12 | 1.312 (14) | C12—H12 | 0.9500 |
| N3—C11 | 1.375 (13) | C13—C14 | 1.378 (17) |
| N4—C19 | 1.377 (14) | C13—H13 | 0.9500 |
| N4—H1N | 0.8800 (11) | C14—C15 | 1.403 (15) |
| N4—H2N | 0.8800 (10) | C14—H14 | 0.9500 |
| C1—C2 | 1.382 (19) | C15—H15 | 0.9500 |
| C1—H1 | 0.9500 | C16—C21 | 1.414 (14) |
| C2—C3 | 1.37 (2) | C16—C17 | 1.426 (15) |
| C2—H2 | 0.9500 | C17—C18 | 1.387 (15) |
| C3—C4 | 1.394 (17) | C17—H17 | 0.9500 |
| C3—H3 | 0.9500 | C18—C19 | 1.401 (15) |
| C4—C5 | 1.374 (17) | C18—H18 | 0.9500 |
| C4—H4 | 0.9500 | C19—C20 | 1.370 (15) |
| C5—C6 | 1.492 (15) | C20—C21 | 1.377 (15) |
| C6—C7 | 1.371 (16) | C20—H20 | 0.9500 |
| C7—C8 | 1.404 (15) | C21—H21 | 0.9500 |
| N2—Pd—N3 | 81.3 (4) | C9—C8—C16 | 121.2 (9) |
| N2—Pd—N1 | 80.3 (4) | C10—C9—C8 | 120.8 (9) |
| N3—Pd—N1 | 161.6 (4) | C10—C9—H9 | 119.6 |
| N2—Pd—Cl1 | 179.2 (3) | C8—C9—H9 | 119.6 |
| N3—Pd—Cl1 | 98.8 (3) | N2—C10—C9 | 119.0 (10) |
| N1—Pd—Cl1 | 99.6 (3) | N2—C10—C11 | 112.7 (9) |
| C1—N1—C5 | 119.3 (11) | C9—C10—C11 | 128.3 (9) |
| C1—N1—Pd | 126.7 (9) | N3—C11—C15 | 120.8 (10) |
| C5—N1—Pd | 114.0 (7) | N3—C11—C10 | 115.0 (9) |
| C6—N2—C10 | 122.6 (9) | C15—C11—C10 | 124.1 (9) |
| C6—N2—Pd | 119.3 (7) | N3—C12—C13 | 123.8 (11) |
| C10—N2—Pd | 118.1 (8) | N3—C12—H12 | 118.1 |
| C12—N3—C11 | 118.6 (10) | C13—C12—H12 | 118.1 |
| C12—N3—Pd | 128.7 (8) | C14—C13—C12 | 119.0 (11) |
| C11—N3—Pd | 112.7 (7) | C14—C13—H13 | 120.5 |
| C19—N4—H1N | 121 (7) | C12—C13—H13 | 120.5 |
| C19—N4—H2N | 121 (7) | C13—C14—C15 | 118.6 (12) |
| H1N—N4—H2N | 109 (8) | C13—C14—H14 | 120.7 |
| N1—C1—C2 | 120.3 (13) | C15—C14—H14 | 120.7 |
| N1—C1—H1 | 119.8 | C11—C15—C14 | 119.1 (10) |
| C2—C1—H1 | 119.8 | C11—C15—H15 | 120.5 |
| C3—C2—C1 | 121.1 (12) | C14—C15—H15 | 120.5 |
| C3—C2—H2 | 119.5 | C21—C16—C17 | 115.1 (10) |
| C1—C2—H2 | 119.5 | C21—C16—C8 | 122.2 (9) |
| C2—C3—C4 | 118.0 (13) | C17—C16—C8 | 122.6 (9) |
| C2—C3—H3 | 121.0 | C18—C17—C16 | 121.3 (10) |
| C4—C3—H3 | 121.0 | C18—C17—H17 | 119.3 |
| C5—C4—C3 | 119.7 (13) | C16—C17—H17 | 119.3 |
| C5—C4—H4 | 120.2 | C17—C18—C19 | 121.5 (10) |
| C3—C4—H4 | 120.2 | C17—C18—H18 | 119.3 |
| N1—C5—C4 | 121.6 (10) | C19—C18—H18 | 119.3 |
| N1—C5—C6 | 113.5 (10) | C20—C19—N4 | 121.9 (10) |
| C4—C5—C6 | 124.8 (11) | C20—C19—C18 | 117.6 (10) |
| N2—C6—C7 | 120.1 (10) | N4—C19—C18 | 120.4 (10) |
| N2—C6—C5 | 112.8 (10) | C19—C20—C21 | 122.0 (9) |
| C7—C6—C5 | 127.1 (11) | C19—C20—H20 | 119.0 |
| C6—C7—C8 | 120.7 (11) | C21—C20—H20 | 119.0 |
| C6—C7—H7 | 119.6 | C20—C21—C16 | 122.4 (10) |
| C8—C7—H7 | 119.6 | C20—C21—H21 | 118.8 |
| C7—C8—C9 | 116.8 (10) | C16—C21—H21 | 118.8 |
| C7—C8—C16 | 122.0 (9) | ||
| N2—Pd—N1—C1 | −176.1 (9) | C6—C7—C8—C16 | 179.9 (9) |
| N3—Pd—N1—C1 | −173.8 (9) | C7—C8—C9—C10 | 2.2 (14) |
| Cl1—Pd—N1—C1 | 3.2 (9) | C16—C8—C9—C10 | −179.6 (9) |
| N2—Pd—N1—C5 | 1.9 (7) | C6—N2—C10—C9 | −0.7 (15) |
| N3—Pd—N1—C5 | 4.2 (15) | Pd—N2—C10—C9 | 177.8 (7) |
| Cl1—Pd—N1—C5 | −178.8 (6) | C6—N2—C10—C11 | 179.7 (9) |
| N3—Pd—N2—C6 | 178.0 (8) | Pd—N2—C10—C11 | −1.8 (11) |
| N1—Pd—N2—C6 | −2.7 (7) | C8—C9—C10—N2 | −0.9 (15) |
| N3—Pd—N2—C10 | −0.5 (7) | C8—C9—C10—C11 | 178.6 (10) |
| N1—Pd—N2—C10 | 178.7 (8) | C12—N3—C11—C15 | −1.7 (14) |
| N2—Pd—N3—C12 | −176.4 (9) | Pd—N3—C11—C15 | 179.0 (7) |
| N1—Pd—N3—C12 | −178.7 (9) | C12—N3—C11—C10 | 174.7 (9) |
| Cl1—Pd—N3—C12 | 4.4 (9) | Pd—N3—C11—C10 | −4.6 (11) |
| N2—Pd—N3—C11 | 2.9 (7) | N2—C10—C11—N3 | 4.2 (13) |
| N1—Pd—N3—C11 | 0.6 (14) | C9—C10—C11—N3 | −175.3 (9) |
| Cl1—Pd—N3—C11 | −176.3 (6) | N2—C10—C11—C15 | −179.5 (9) |
| C5—N1—C1—C2 | −0.5 (15) | C9—C10—C11—C15 | 0.9 (17) |
| Pd—N1—C1—C2 | 177.4 (8) | C11—N3—C12—C13 | 0.4 (16) |
| N1—C1—C2—C3 | 1.9 (17) | Pd—N3—C12—C13 | 179.7 (8) |
| C1—C2—C3—C4 | −2.3 (17) | N3—C12—C13—C14 | 1.4 (18) |
| C2—C3—C4—C5 | 1.3 (17) | C12—C13—C14—C15 | −1.9 (17) |
| C1—N1—C5—C4 | −0.5 (15) | N3—C11—C15—C14 | 1.1 (15) |
| Pd—N1—C5—C4 | −178.7 (8) | C10—C11—C15—C14 | −174.9 (9) |
| C1—N1—C5—C6 | 177.1 (9) | C13—C14—C15—C11 | 0.7 (15) |
| Pd—N1—C5—C6 | −1.0 (11) | C7—C8—C16—C21 | −10.2 (15) |
| C3—C4—C5—N1 | 0.1 (16) | C9—C8—C16—C21 | 171.7 (9) |
| C3—C4—C5—C6 | −177.3 (10) | C7—C8—C16—C17 | 171.5 (9) |
| C10—N2—C6—C7 | 0.9 (15) | C9—C8—C16—C17 | −6.6 (15) |
| Pd—N2—C6—C7 | −177.6 (7) | C21—C16—C17—C18 | 3.5 (14) |
| C10—N2—C6—C5 | −178.7 (9) | C8—C16—C17—C18 | −178.1 (9) |
| Pd—N2—C6—C5 | 2.9 (11) | C16—C17—C18—C19 | −0.8 (16) |
| N1—C5—C6—N2 | −1.0 (12) | C17—C18—C19—C20 | −2.4 (15) |
| C4—C5—C6—N2 | 176.5 (10) | C17—C18—C19—N4 | −179.9 (9) |
| N1—C5—C6—C7 | 179.4 (9) | N4—C19—C20—C21 | −179.8 (9) |
| C4—C5—C6—C7 | −3.0 (17) | C18—C19—C20—C21 | 2.8 (15) |
| N2—C6—C7—C8 | 0.5 (15) | C19—C20—C21—C16 | 0.1 (16) |
| C5—C6—C7—C8 | 180.0 (9) | C17—C16—C21—C20 | −3.2 (14) |
| C6—C7—C8—C9 | −1.9 (14) | C8—C16—C21—C20 | 178.4 (9) |
| H··· | ||||
| N4—H1n···Cl2 | 0.88 (9) | 2.42 (7) | 3.287 (11) | 167 (8) |
| N4—H2n···Cl2i | 0.88 (7) | 2.48 (8) | 3.352 (10) | 173 (10) |
| C13—H13···Cl1ii | 0.95 | 2.61 | 3.493 (14) | 156 |
| C15—H15···Cl2iii | 0.95 | 2.56 | 3.449 (12) | 155 |
Selected bond lengths (Å)
| Pd—N1 | 2.034 (10) |
| Pd—N2 | 1.922 (9) |
| Pd—N3 | 2.022 (10) |
| Pd—Cl1 | 2.290 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N4—H1n⋯Cl2 | 0.88 (9) | 2.42 (7) | 3.287 (11) | 167 (8) |
| N4—H2n⋯Cl2i | 0.88 (7) | 2.48 (8) | 3.352 (10) | 173 (10) |
| C13—H13⋯Cl1ii | 0.95 | 2.61 | 3.493 (14) | 156 |
| C15—H15⋯Cl2iii | 0.95 | 2.56 | 3.449 (12) | 155 |
Symmetry codes: (i) ; (ii) ; (iii) .