| Literature DB >> 21754617 |
Shui Hu, Shipeng Wen, Huai-Ming Hu, Li Liu.
Abstract
In the title compound, [Ni(C(12)H(6)N(2)O(4))(H(2)O)(2)], the Ni(II) atom (site symmetry 2) displays a distorted cis-NiN(2)O(4) octa-hedral coordination geometry with two N atoms and two O atoms of the tetra-dentate 2,2'-bipyridine-6,6'-dicarboxyl-ate ligand in the equatorial plane and two water mol-ecules in axial positions. The complete dianionic ligand is generated by crystallographic twofold symmetry. In the crystal, a two-dimensional supra-molecular structure parallel to (001) is formed through O-H⋯O hydrogen-bond inter-actions between the coordinated water mol-ecules and the O atoms of nearby carboxyl-ate groups.Entities:
Year: 2011 PMID: 21754617 PMCID: PMC3120548 DOI: 10.1107/S1600536811016400
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C12H6N2O4)(H2O)2] | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ab 2ac | Cell parameters from 1650 reflections |
| θ = 3.2–25.2° | |
| µ = 1.60 mm−1 | |
| Block, green | |
| 0.24 × 0.16 × 0.10 mm |
| Bruker APEXII CCD diffractometer | 1274 independent reflections |
| Radiation source: fine-focus sealed tube | 1098 reflections with |
| graphite | |
| φ and ω scans | θmax = 26.4°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 6269 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1274 reflections | (Δ/σ)max < 0.001 |
| 102 parameters | Δρmax = 0.48 e Å−3 |
| 2 restraints | Δρmin = −0.23 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Ni1 | 0.2500 | 0.7500 | 0.16327 (3) | 0.02540 (16) | |
| N1 | 0.0931 (3) | 0.80137 (16) | 0.06211 (12) | 0.0285 (4) | |
| O1 | 0.0167 (2) | 0.83346 (15) | 0.22531 (11) | 0.0360 (4) | |
| O2 | −0.2446 (2) | 0.93408 (18) | 0.19595 (16) | 0.0517 (6) | |
| C1 | −0.1035 (3) | 0.8756 (2) | 0.17424 (18) | 0.0348 (6) | |
| C2 | −0.0683 (4) | 0.8569 (2) | 0.07707 (17) | 0.0332 (6) | |
| C3 | −0.1808 (4) | 0.8936 (2) | 0.0083 (2) | 0.0464 (7) | |
| H3 | −0.2934 | 0.9332 | 0.0182 | 0.056* | |
| C4 | −0.1204 (5) | 0.8695 (3) | −0.0750 (2) | 0.0563 (9) | |
| H4 | −0.1951 | 0.8915 | −0.1221 | 0.068* | |
| C5 | 0.0486 (5) | 0.8132 (2) | −0.09017 (18) | 0.0506 (8) | |
| H5 | 0.0894 | 0.7982 | −0.1467 | 0.061* | |
| C6 | 0.1564 (4) | 0.7796 (2) | −0.01856 (16) | 0.0348 (6) | |
| O3 | 0.1216 (2) | 0.58888 (16) | 0.17647 (13) | 0.0380 (5) | |
| H3A | 0.009 (3) | 0.584 (3) | 0.1803 (18) | 0.046* | |
| H3B | 0.169 (4) | 0.545 (2) | 0.2135 (15) | 0.046* |
| Ni1 | 0.0254 (3) | 0.0293 (3) | 0.0215 (2) | 0.00250 (16) | 0.000 | 0.000 |
| N1 | 0.0341 (11) | 0.0256 (10) | 0.0260 (11) | −0.0004 (9) | −0.0053 (9) | −0.0005 (8) |
| O1 | 0.0336 (9) | 0.0402 (10) | 0.0343 (10) | 0.0040 (8) | 0.0046 (8) | −0.0040 (8) |
| O2 | 0.0263 (10) | 0.0466 (12) | 0.0821 (15) | 0.0055 (8) | −0.0004 (9) | −0.0232 (11) |
| C1 | 0.0248 (12) | 0.0269 (12) | 0.0526 (17) | −0.0047 (10) | 0.0005 (12) | −0.0078 (11) |
| C2 | 0.0316 (13) | 0.0217 (12) | 0.0464 (16) | −0.0021 (10) | −0.0109 (11) | −0.0021 (10) |
| C3 | 0.0437 (15) | 0.0291 (14) | 0.067 (2) | −0.0016 (11) | −0.0276 (15) | 0.0050 (13) |
| C4 | 0.073 (2) | 0.0378 (16) | 0.059 (2) | −0.0073 (15) | −0.0407 (18) | 0.0134 (14) |
| C5 | 0.085 (2) | 0.0380 (16) | 0.0289 (15) | −0.0094 (16) | −0.0177 (15) | 0.0061 (11) |
| C6 | 0.0530 (17) | 0.0261 (12) | 0.0252 (12) | −0.0045 (11) | −0.0073 (12) | 0.0018 (9) |
| O3 | 0.0259 (9) | 0.0364 (10) | 0.0519 (12) | 0.0001 (8) | 0.0044 (9) | 0.0117 (8) |
| Ni1—N1i | 1.9975 (19) | C2—C3 | 1.387 (4) |
| Ni1—N1 | 1.9975 (19) | C3—C4 | 1.375 (5) |
| Ni1—O3i | 2.0553 (18) | C3—H3 | 0.9300 |
| Ni1—O3 | 2.0553 (18) | C4—C5 | 1.381 (5) |
| Ni1—O1i | 2.1335 (16) | C4—H4 | 0.9300 |
| Ni1—O1 | 2.1335 (16) | C5—C6 | 1.392 (4) |
| N1—C2 | 1.329 (3) | C5—H5 | 0.9300 |
| N1—C6 | 1.339 (3) | C6—C6i | 1.491 (5) |
| O1—C1 | 1.254 (3) | O3—H3A | 0.806 (18) |
| O2—C1 | 1.247 (3) | O3—H3B | 0.827 (17) |
| C1—C2 | 1.526 (4) | ||
| N1i—Ni1—N1 | 78.11 (11) | O2—C1—C2 | 117.8 (2) |
| N1i—Ni1—O3i | 95.10 (8) | O1—C1—C2 | 116.4 (2) |
| N1—Ni1—O3i | 93.67 (8) | N1—C2—C3 | 120.6 (3) |
| N1i—Ni1—O3 | 93.67 (8) | N1—C2—C1 | 112.1 (2) |
| N1—Ni1—O3 | 95.10 (8) | C3—C2—C1 | 127.3 (3) |
| O3i—Ni1—O3 | 168.70 (11) | C4—C3—C2 | 117.8 (3) |
| N1i—Ni1—O1i | 77.45 (7) | C4—C3—H3 | 121.1 |
| N1—Ni1—O1i | 155.48 (8) | C2—C3—H3 | 121.1 |
| O3i—Ni1—O1i | 90.40 (7) | C3—C4—C5 | 121.4 (3) |
| O3—Ni1—O1i | 84.56 (7) | C3—C4—H4 | 119.3 |
| N1i—Ni1—O1 | 155.48 (8) | C5—C4—H4 | 119.3 |
| N1—Ni1—O1 | 77.45 (7) | C4—C5—C6 | 118.2 (3) |
| O3i—Ni1—O1 | 84.56 (7) | C4—C5—H5 | 120.9 |
| O3—Ni1—O1 | 90.40 (7) | C6—C5—H5 | 120.9 |
| O1i—Ni1—O1 | 127.04 (9) | N1—C6—C5 | 119.5 (3) |
| C2—N1—C6 | 122.5 (2) | N1—C6—C6i | 112.53 (14) |
| C2—N1—Ni1 | 119.11 (17) | C5—C6—C6i | 127.93 (19) |
| C6—N1—Ni1 | 118.41 (17) | Ni1—O3—H3A | 121 (2) |
| C1—O1—Ni1 | 114.88 (15) | Ni1—O3—H3B | 115 (2) |
| O2—C1—O1 | 125.7 (3) | H3A—O3—H3B | 108 (3) |
| N1i—Ni1—N1—C2 | −178.6 (2) | Ni1—N1—C2—C3 | −179.86 (17) |
| O3i—Ni1—N1—C2 | −84.19 (18) | C6—N1—C2—C1 | −177.4 (2) |
| O3—Ni1—N1—C2 | 88.68 (18) | Ni1—N1—C2—C1 | 1.8 (3) |
| O1i—Ni1—N1—C2 | 176.75 (16) | O2—C1—C2—N1 | 175.2 (2) |
| O1—Ni1—N1—C2 | −0.59 (17) | O1—C1—C2—N1 | −2.6 (3) |
| N1i—Ni1—N1—C6 | 0.53 (13) | O2—C1—C2—C3 | −3.1 (4) |
| O3i—Ni1—N1—C6 | 94.98 (18) | O1—C1—C2—C3 | 179.2 (2) |
| O3—Ni1—N1—C6 | −92.15 (18) | N1—C2—C3—C4 | 0.6 (4) |
| O1i—Ni1—N1—C6 | −4.1 (3) | C1—C2—C3—C4 | 178.7 (2) |
| O1—Ni1—N1—C6 | 178.57 (19) | C2—C3—C4—C5 | −1.5 (4) |
| N1i—Ni1—O1—C1 | 3.7 (3) | C3—C4—C5—C6 | 1.0 (4) |
| N1—Ni1—O1—C1 | −0.96 (16) | C2—N1—C6—C5 | −1.6 (4) |
| O3i—Ni1—O1—C1 | 94.04 (17) | Ni1—N1—C6—C5 | 179.24 (19) |
| O3—Ni1—O1—C1 | −96.09 (17) | C2—N1—C6—C6i | 177.8 (2) |
| O1i—Ni1—O1—C1 | −179.58 (17) | Ni1—N1—C6—C6i | −1.4 (3) |
| Ni1—O1—C1—O2 | −175.4 (2) | C4—C5—C6—N1 | 0.6 (4) |
| Ni1—O1—C1—C2 | 2.1 (3) | C4—C5—C6—C6i | −178.7 (3) |
| C6—N1—C2—C3 | 1.0 (4) |
| H··· | ||||
| O3—H3A···O2ii | 0.81 (2) | 1.90 (2) | 2.708 (2) | 176 (3) |
| O3—H3B···O2iii | 0.83 (2) | 1.95 (2) | 2.772 (3) | 172 (3) |
Selected bond lengths (Å)
| Ni1—N1 | 1.9975 (19) |
| Ni1—O3 | 2.0553 (18) |
| Ni1—O1 | 2.1335 (16) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3 | 0.81 (2) | 1.90 (2) | 2.708 (2) | 176 (3) |
| O3—H3 | 0.83 (2) | 1.95 (2) | 2.772 (3) | 172 (3) |
Symmetry codes: (i) ; (ii) .