| Literature DB >> 21754503 |
Adam Neuba1, Ulrich Flörke, Gerald Henkel.
Abstract
The mol-ecular structure of the title compound, C(18)H(23)N(3)S, shows it to be a derivative of an amino-thio-phenol possessing a tetra-methyl-guanidine group with a localized C=N double bond of 1.304 (2) Å and a protected thiol functional group as an S-benzyl thio-ether. The two aromatic ring planes make a dihedral angle of 67.69 (6)°.Entities:
Year: 2011 PMID: 21754503 PMCID: PMC3089166 DOI: 10.1107/S1600536811014577
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H23N3S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 842 reflections |
| θ = 2.7–27.7° | |
| µ = 0.19 mm−1 | |
| β = 106.959 (5)° | Block, colourless |
| 0.42 × 0.33 × 0.29 mm | |
| Bruker SMART APEX diffractometer | 3988 independent reflections |
| Radiation source: sealed tube | 2816 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.9°, θmin = 1.5° |
| Absorption correction: multi-scan ( | |
| 14278 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| H-atom parameters constrained | |
| 3988 reflections | (Δ/σ)max = 0.001 |
| 203 parameters | Δρmax = 0.24 e Å−3 |
| 0 restraints | Δρmin = −0.34 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.48274 (6) | 0.392868 (13) | 0.76377 (5) | 0.02350 (11) | |
| N1 | 0.64141 (18) | 0.33140 (4) | 0.56770 (16) | 0.0214 (3) | |
| N2 | 0.93294 (17) | 0.29594 (4) | 0.63993 (16) | 0.0232 (3) | |
| N3 | 0.68294 (18) | 0.24922 (4) | 0.50838 (17) | 0.0239 (3) | |
| C1 | 0.7516 (2) | 0.29479 (5) | 0.57258 (18) | 0.0203 (3) | |
| C2 | 1.0512 (2) | 0.27118 (7) | 0.5595 (2) | 0.0362 (4) | |
| H2A | 0.9806 | 0.2524 | 0.4615 | 0.054* | |
| H2B | 1.1294 | 0.2483 | 0.6395 | 0.054* | |
| H2C | 1.1231 | 0.2961 | 0.5232 | 0.054* | |
| C3 | 1.0191 (2) | 0.33296 (6) | 0.7646 (2) | 0.0291 (4) | |
| H3A | 1.0587 | 0.3609 | 0.7089 | 0.044* | |
| H3B | 1.1220 | 0.3179 | 0.8466 | 0.044* | |
| H3C | 0.9349 | 0.3450 | 0.8225 | 0.044* | |
| C4 | 0.4983 (2) | 0.24676 (6) | 0.4081 (2) | 0.0311 (4) | |
| H4A | 0.4223 | 0.2445 | 0.4825 | 0.047* | |
| H4B | 0.4800 | 0.2173 | 0.3354 | 0.047* | |
| H4C | 0.4678 | 0.2768 | 0.3385 | 0.047* | |
| C5 | 0.7491 (2) | 0.20329 (5) | 0.5999 (2) | 0.0309 (4) | |
| H5A | 0.8732 | 0.2079 | 0.6666 | 0.046* | |
| H5B | 0.7414 | 0.1760 | 0.5196 | 0.046* | |
| H5C | 0.6772 | 0.1952 | 0.6746 | 0.046* | |
| C6 | 0.6947 (2) | 0.38116 (5) | 0.56372 (19) | 0.0192 (3) | |
| C7 | 0.7988 (2) | 0.39792 (5) | 0.4653 (2) | 0.0233 (3) | |
| H7A | 0.8470 | 0.3744 | 0.4052 | 0.028* | |
| C8 | 0.8338 (2) | 0.44823 (6) | 0.4527 (2) | 0.0252 (4) | |
| H8A | 0.9042 | 0.4589 | 0.3838 | 0.030* | |
| C9 | 0.7656 (2) | 0.48271 (5) | 0.5412 (2) | 0.0236 (3) | |
| H9A | 0.7905 | 0.5171 | 0.5343 | 0.028* | |
| C10 | 0.6610 (2) | 0.46705 (5) | 0.63978 (19) | 0.0220 (3) | |
| H10A | 0.6153 | 0.4908 | 0.7009 | 0.026* | |
| C11 | 0.6223 (2) | 0.41684 (5) | 0.65010 (18) | 0.0192 (3) | |
| C12 | 0.4411 (2) | 0.44748 (5) | 0.8758 (2) | 0.0243 (4) | |
| H12A | 0.5549 | 0.4615 | 0.9463 | 0.029* | |
| H12B | 0.3797 | 0.4733 | 0.7947 | 0.029* | |
| C13 | 0.3272 (2) | 0.43232 (5) | 0.98479 (19) | 0.0210 (3) | |
| C14 | 0.4001 (2) | 0.40508 (6) | 1.1318 (2) | 0.0274 (4) | |
| H14A | 0.5226 | 0.3966 | 1.1635 | 0.033* | |
| C15 | 0.2967 (3) | 0.39029 (6) | 1.2317 (2) | 0.0317 (4) | |
| H15A | 0.3480 | 0.3719 | 1.3316 | 0.038* | |
| C16 | 0.1184 (3) | 0.40237 (6) | 1.1860 (2) | 0.0332 (4) | |
| H16A | 0.0467 | 0.3919 | 1.2539 | 0.040* | |
| C17 | 0.0442 (2) | 0.42969 (6) | 1.0417 (2) | 0.0329 (4) | |
| H17A | −0.0781 | 0.4384 | 1.0113 | 0.039* | |
| C18 | 0.1484 (2) | 0.44444 (6) | 0.9414 (2) | 0.0266 (4) | |
| H18A | 0.0967 | 0.4630 | 0.8420 | 0.032* |
| S1 | 0.0297 (2) | 0.01664 (17) | 0.0296 (2) | −0.00079 (16) | 0.01715 (18) | −0.00202 (15) |
| N1 | 0.0224 (7) | 0.0167 (6) | 0.0277 (7) | −0.0022 (5) | 0.0116 (6) | −0.0044 (5) |
| N2 | 0.0206 (7) | 0.0215 (6) | 0.0263 (7) | −0.0002 (5) | 0.0047 (6) | −0.0055 (5) |
| N3 | 0.0234 (7) | 0.0164 (6) | 0.0296 (7) | −0.0001 (5) | 0.0043 (6) | −0.0045 (5) |
| C1 | 0.0237 (9) | 0.0187 (7) | 0.0199 (8) | −0.0011 (6) | 0.0089 (7) | −0.0020 (6) |
| C2 | 0.0267 (10) | 0.0419 (10) | 0.0414 (11) | 0.0044 (8) | 0.0121 (9) | −0.0069 (8) |
| C3 | 0.0288 (10) | 0.0255 (8) | 0.0281 (9) | −0.0054 (7) | 0.0008 (8) | −0.0025 (7) |
| C4 | 0.0253 (10) | 0.0251 (8) | 0.0400 (10) | −0.0031 (7) | 0.0049 (8) | −0.0076 (7) |
| C5 | 0.0350 (10) | 0.0193 (7) | 0.0367 (10) | 0.0001 (7) | 0.0076 (9) | −0.0016 (7) |
| C6 | 0.0175 (8) | 0.0181 (7) | 0.0219 (8) | −0.0009 (6) | 0.0058 (7) | −0.0018 (6) |
| C7 | 0.0221 (9) | 0.0230 (8) | 0.0277 (8) | 0.0002 (6) | 0.0119 (7) | −0.0037 (6) |
| C8 | 0.0228 (9) | 0.0273 (8) | 0.0279 (9) | −0.0026 (7) | 0.0111 (7) | 0.0035 (7) |
| C9 | 0.0242 (9) | 0.0168 (7) | 0.0289 (9) | −0.0020 (6) | 0.0061 (7) | 0.0020 (6) |
| C10 | 0.0228 (9) | 0.0173 (7) | 0.0252 (8) | 0.0013 (6) | 0.0059 (7) | −0.0012 (6) |
| C11 | 0.0182 (8) | 0.0195 (7) | 0.0209 (8) | −0.0004 (6) | 0.0071 (7) | −0.0002 (6) |
| C12 | 0.0305 (10) | 0.0174 (7) | 0.0280 (9) | 0.0022 (6) | 0.0131 (8) | −0.0036 (6) |
| C13 | 0.0258 (9) | 0.0169 (7) | 0.0218 (8) | 0.0007 (6) | 0.0092 (7) | −0.0061 (6) |
| C14 | 0.0259 (9) | 0.0296 (8) | 0.0267 (9) | 0.0056 (7) | 0.0076 (8) | −0.0013 (7) |
| C15 | 0.0425 (11) | 0.0296 (8) | 0.0243 (9) | 0.0015 (8) | 0.0117 (8) | 0.0015 (7) |
| C16 | 0.0423 (12) | 0.0292 (9) | 0.0372 (10) | −0.0078 (8) | 0.0260 (9) | −0.0093 (7) |
| C17 | 0.0224 (10) | 0.0332 (9) | 0.0451 (11) | 0.0010 (7) | 0.0129 (9) | −0.0113 (8) |
| C18 | 0.0282 (10) | 0.0235 (8) | 0.0281 (9) | 0.0028 (7) | 0.0082 (8) | −0.0025 (6) |
| S1—C11 | 1.7661 (15) | C6—C11 | 1.413 (2) |
| S1—C12 | 1.8175 (15) | C7—C8 | 1.389 (2) |
| N1—C1 | 1.3035 (19) | C7—H7A | 0.9500 |
| N1—C6 | 1.4033 (18) | C8—C9 | 1.384 (2) |
| N2—C1 | 1.373 (2) | C8—H8A | 0.9500 |
| N2—C3 | 1.4536 (19) | C9—C10 | 1.386 (2) |
| N2—C2 | 1.455 (2) | C9—H9A | 0.9500 |
| N3—C1 | 1.3804 (18) | C10—C11 | 1.390 (2) |
| N3—C4 | 1.451 (2) | C10—H10A | 0.9500 |
| N3—C5 | 1.4628 (19) | C12—C13 | 1.505 (2) |
| C2—H2A | 0.9800 | C12—H12A | 0.9900 |
| C2—H2B | 0.9800 | C12—H12B | 0.9900 |
| C2—H2C | 0.9800 | C13—C18 | 1.385 (2) |
| C3—H3A | 0.9800 | C13—C14 | 1.396 (2) |
| C3—H3B | 0.9800 | C14—C15 | 1.380 (2) |
| C3—H3C | 0.9800 | C14—H14A | 0.9500 |
| C4—H4A | 0.9800 | C15—C16 | 1.381 (3) |
| C4—H4B | 0.9800 | C15—H15A | 0.9500 |
| C4—H4C | 0.9800 | C16—C17 | 1.382 (2) |
| C5—H5A | 0.9800 | C16—H16A | 0.9500 |
| C5—H5B | 0.9800 | C17—C18 | 1.387 (2) |
| C5—H5C | 0.9800 | C17—H17A | 0.9500 |
| C6—C7 | 1.391 (2) | C18—H18A | 0.9500 |
| C11—S1—C12 | 102.33 (7) | C8—C7—H7A | 119.2 |
| C1—N1—C6 | 121.20 (13) | C6—C7—H7A | 119.2 |
| C1—N2—C3 | 121.30 (13) | C9—C8—C7 | 119.62 (14) |
| C1—N2—C2 | 122.01 (13) | C9—C8—H8A | 120.2 |
| C3—N2—C2 | 114.35 (14) | C7—C8—H8A | 120.2 |
| C1—N3—C4 | 118.43 (13) | C8—C9—C10 | 120.05 (14) |
| C1—N3—C5 | 120.43 (14) | C8—C9—H9A | 120.0 |
| C4—N3—C5 | 113.92 (13) | C10—C9—H9A | 120.0 |
| N1—C1—N2 | 126.77 (14) | C9—C10—C11 | 120.61 (14) |
| N1—C1—N3 | 118.33 (15) | C9—C10—H10A | 119.7 |
| N2—C1—N3 | 114.87 (13) | C11—C10—H10A | 119.7 |
| N2—C2—H2A | 109.5 | C10—C11—C6 | 119.88 (14) |
| N2—C2—H2B | 109.5 | C10—C11—S1 | 124.60 (12) |
| H2A—C2—H2B | 109.5 | C6—C11—S1 | 115.51 (11) |
| N2—C2—H2C | 109.5 | C13—C12—S1 | 108.58 (10) |
| H2A—C2—H2C | 109.5 | C13—C12—H12A | 110.0 |
| H2B—C2—H2C | 109.5 | S1—C12—H12A | 110.0 |
| N2—C3—H3A | 109.5 | C13—C12—H12B | 110.0 |
| N2—C3—H3B | 109.5 | S1—C12—H12B | 110.0 |
| H3A—C3—H3B | 109.5 | H12A—C12—H12B | 108.4 |
| N2—C3—H3C | 109.5 | C18—C13—C14 | 118.55 (15) |
| H3A—C3—H3C | 109.5 | C18—C13—C12 | 121.19 (14) |
| H3B—C3—H3C | 109.5 | C14—C13—C12 | 120.25 (15) |
| N3—C4—H4A | 109.5 | C15—C14—C13 | 120.91 (16) |
| N3—C4—H4B | 109.5 | C15—C14—H14A | 119.5 |
| H4A—C4—H4B | 109.5 | C13—C14—H14A | 119.5 |
| N3—C4—H4C | 109.5 | C14—C15—C16 | 119.81 (16) |
| H4A—C4—H4C | 109.5 | C14—C15—H15A | 120.1 |
| H4B—C4—H4C | 109.5 | C16—C15—H15A | 120.1 |
| N3—C5—H5A | 109.5 | C15—C16—C17 | 120.10 (16) |
| N3—C5—H5B | 109.5 | C15—C16—H16A | 120.0 |
| H5A—C5—H5B | 109.5 | C17—C16—H16A | 120.0 |
| N3—C5—H5C | 109.5 | C16—C17—C18 | 119.97 (17) |
| H5A—C5—H5C | 109.5 | C16—C17—H17A | 120.0 |
| H5B—C5—H5C | 109.5 | C18—C17—H17A | 120.0 |
| C7—C6—N1 | 123.59 (13) | C13—C18—C17 | 120.66 (16) |
| C7—C6—C11 | 118.26 (13) | C13—C18—H18A | 119.7 |
| N1—C6—C11 | 117.77 (13) | C17—C18—H18A | 119.7 |
| C8—C7—C6 | 121.54 (14) | ||
| C6—N1—C1—N2 | 28.2 (2) | C9—C10—C11—S1 | −177.01 (12) |
| C6—N1—C1—N3 | −153.64 (14) | C7—C6—C11—C10 | −2.2 (2) |
| C3—N2—C1—N1 | 21.5 (2) | N1—C6—C11—C10 | −175.37 (14) |
| C2—N2—C1—N1 | −140.14 (17) | C7—C6—C11—S1 | 176.95 (12) |
| C3—N2—C1—N3 | −156.70 (13) | N1—C6—C11—S1 | 3.76 (18) |
| C2—N2—C1—N3 | 41.6 (2) | C12—S1—C11—C10 | −7.87 (16) |
| C4—N3—C1—N1 | 12.7 (2) | C12—S1—C11—C6 | 173.05 (12) |
| C5—N3—C1—N1 | −135.83 (16) | C11—S1—C12—C13 | −178.03 (11) |
| C4—N3—C1—N2 | −168.95 (14) | S1—C12—C13—C18 | −105.18 (15) |
| C5—N3—C1—N2 | 42.6 (2) | S1—C12—C13—C14 | 74.12 (16) |
| C1—N1—C6—C7 | 42.6 (2) | C18—C13—C14—C15 | 0.3 (2) |
| C1—N1—C6—C11 | −144.63 (15) | C12—C13—C14—C15 | −179.05 (14) |
| N1—C6—C7—C8 | 173.60 (15) | C13—C14—C15—C16 | 0.2 (2) |
| C11—C6—C7—C8 | 0.8 (2) | C14—C15—C16—C17 | −0.8 (2) |
| C6—C7—C8—C9 | 0.7 (2) | C15—C16—C17—C18 | 0.9 (2) |
| C7—C8—C9—C10 | −0.9 (2) | C14—C13—C18—C17 | −0.2 (2) |
| C8—C9—C10—C11 | −0.5 (2) | C12—C13—C18—C17 | 179.14 (14) |
| C9—C10—C11—C6 | 2.0 (2) | C16—C17—C18—C13 | −0.4 (2) |