| Literature DB >> 21754498 |
Hoong-Kun Fun, Mohd Mustaqim Rosli, Balakrishna Kalluraya.
Abstract
In the crystal, C(20)H(15)N(7)O(6)S, the dihedral angle between the oxadiazole and triazine rings is 86.94 (7)°. The oxadiazole ring makes a dihedral angle of 52.96 (8)° with the phenyl ring, while the triazine ring makes a dihedral angle of 82.08 (7)° with the benzene ring. In the structure, mol-ecules are linked by a pair of N-H⋯O hydrogen bonds, forming an inversion dimer. The dimers are further stacked along the a axis via N-H⋯N hydrogen bonds. Weak inter-molecular C-H⋯O inter-actions are also observed.Entities:
Year: 2011 PMID: 21754498 PMCID: PMC3089265 DOI: 10.1107/S1600536811014504
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H15N7O6S | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 5430 reflections | |
| θ = 3.7–30.1° | |
| µ = 0.21 mm−1 | |
| α = 106.372 (1)° | |
| β = 92.400 (1)° | Block, yellow |
| γ = 97.551 (1)° | 0.51 × 0.34 × 0.17 mm |
| Bruker SMART APEXII CCD area-detector diffractometer | 7793 independent reflections |
| Radiation source: fine-focus sealed tube | 5330 reflections with |
| graphite | |
| φ and ω scans | θmax = 32.8°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 21821 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 7793 reflections | (Δ/σ)max < 0.001 |
| 315 parameters | Δρmax = 0.25 e Å−3 |
| 0 restraints | Δρmin = −0.23 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| S1 | 0.76158 (5) | 0.56912 (4) | 0.39458 (2) | 0.04815 (10) | |
| N1 | 1.40303 (17) | 0.45428 (11) | 0.21692 (6) | 0.0388 (2) | |
| N2 | 1.5454 (2) | 0.37194 (13) | 0.20533 (8) | 0.0525 (3) | |
| N3 | 0.73930 (15) | 0.81262 (11) | 0.49757 (6) | 0.0362 (2) | |
| N4 | 1.14452 (17) | 0.85392 (13) | 0.56156 (7) | 0.0460 (3) | |
| N5 | 1.06998 (16) | 0.73678 (12) | 0.49822 (7) | 0.0430 (2) | |
| N6 | 0.8522 (4) | 0.87248 (18) | 0.93514 (10) | 0.0851 (6) | |
| N7 | 0.52842 (19) | 0.77429 (15) | 0.46377 (9) | 0.0531 (3) | |
| O1 | 1.51411 (17) | 0.29797 (10) | 0.26042 (7) | 0.0531 (3) | |
| O2 | 1.29331 (18) | 0.28459 (11) | 0.35900 (7) | 0.0565 (3) | |
| O3 | 1.07909 (19) | 0.62369 (11) | 0.28170 (7) | 0.0604 (3) | |
| O4 | 0.68160 (17) | 1.01247 (11) | 0.58890 (6) | 0.0536 (3) | |
| O5 | 0.6980 (4) | 0.9118 (2) | 0.96790 (12) | 0.1335 (8) | |
| O6 | 0.9522 (4) | 0.7945 (2) | 0.95653 (11) | 0.1279 (8) | |
| C1 | 1.2266 (3) | 0.54038 (16) | 0.11647 (9) | 0.0520 (3) | |
| H1A | 1.1003 | 0.4875 | 0.1210 | 0.062* | |
| C2 | 1.2384 (3) | 0.61847 (18) | 0.06204 (10) | 0.0643 (4) | |
| H2A | 1.1181 | 0.6198 | 0.0302 | 0.077* | |
| C3 | 1.4275 (3) | 0.69420 (17) | 0.05489 (10) | 0.0653 (5) | |
| H3A | 1.4347 | 0.7444 | 0.0171 | 0.078* | |
| C4 | 1.6052 (3) | 0.69646 (18) | 0.10286 (11) | 0.0660 (4) | |
| H4A | 1.7315 | 0.7491 | 0.0980 | 0.079* | |
| C5 | 1.5974 (3) | 0.62030 (16) | 0.15882 (10) | 0.0541 (3) | |
| H5A | 1.7166 | 0.6213 | 0.1919 | 0.065* | |
| C6 | 1.4068 (2) | 0.54316 (13) | 0.16354 (7) | 0.0412 (3) | |
| C7 | 1.3425 (2) | 0.33732 (13) | 0.30715 (8) | 0.0411 (3) | |
| C8 | 1.27298 (19) | 0.44150 (12) | 0.27599 (7) | 0.0352 (2) | |
| C9 | 1.1124 (2) | 0.52770 (12) | 0.30653 (7) | 0.0382 (2) | |
| C10 | 0.9904 (2) | 0.48508 (14) | 0.37157 (8) | 0.0438 (3) | |
| H10A | 1.0834 | 0.5066 | 0.4210 | 0.053* | |
| H10B | 0.9464 | 0.3855 | 0.3535 | 0.053* | |
| C11 | 0.87411 (17) | 0.71923 (13) | 0.47012 (7) | 0.0347 (2) | |
| C12 | 0.8018 (2) | 0.93081 (13) | 0.56189 (7) | 0.0380 (2) | |
| C13 | 1.0230 (2) | 0.94417 (13) | 0.59158 (7) | 0.0392 (3) | |
| C14 | 1.1084 (2) | 1.06316 (14) | 0.66524 (8) | 0.0484 (3) | |
| H14A | 1.0497 | 1.1456 | 0.6635 | 0.058* | |
| H14B | 1.2609 | 1.0831 | 0.6662 | 0.058* | |
| C15 | 1.0474 (2) | 1.02257 (13) | 0.74039 (8) | 0.0418 (3) | |
| C16 | 0.8680 (3) | 1.05963 (15) | 0.77747 (9) | 0.0516 (3) | |
| H16A | 0.7898 | 1.1176 | 0.7592 | 0.062* | |
| C17 | 0.8036 (3) | 1.01111 (17) | 0.84163 (10) | 0.0592 (4) | |
| H17A | 0.6821 | 1.0350 | 0.8663 | 0.071* | |
| C18 | 0.9234 (3) | 0.92666 (15) | 0.86812 (9) | 0.0575 (4) | |
| C19 | 1.1038 (3) | 0.89030 (17) | 0.83385 (10) | 0.0652 (5) | |
| H19A | 1.1834 | 0.8342 | 0.8533 | 0.078* | |
| C20 | 1.1651 (3) | 0.93889 (16) | 0.76961 (9) | 0.0559 (4) | |
| H20A | 1.2875 | 0.9151 | 0.7455 | 0.067* | |
| H2N7 | 0.492 (3) | 0.848 (2) | 0.4511 (12) | 0.084 (6)* | |
| H1N7 | 0.456 (3) | 0.764 (2) | 0.5051 (13) | 0.077 (6)* |
| S1 | 0.03577 (16) | 0.0519 (2) | 0.0551 (2) | 0.01356 (13) | 0.00911 (13) | 0.00898 (15) |
| N1 | 0.0436 (5) | 0.0376 (5) | 0.0387 (5) | 0.0140 (4) | 0.0093 (4) | 0.0123 (4) |
| N2 | 0.0569 (7) | 0.0522 (7) | 0.0586 (7) | 0.0271 (5) | 0.0224 (6) | 0.0211 (6) |
| N3 | 0.0302 (4) | 0.0467 (5) | 0.0407 (5) | 0.0173 (4) | 0.0105 (4) | 0.0210 (4) |
| N4 | 0.0339 (5) | 0.0572 (7) | 0.0483 (6) | 0.0106 (5) | 0.0098 (4) | 0.0150 (5) |
| N5 | 0.0310 (5) | 0.0536 (6) | 0.0477 (6) | 0.0155 (4) | 0.0102 (4) | 0.0147 (5) |
| N6 | 0.1383 (18) | 0.0596 (9) | 0.0504 (8) | −0.0176 (10) | 0.0025 (10) | 0.0201 (7) |
| N7 | 0.0326 (5) | 0.0653 (8) | 0.0628 (8) | 0.0238 (5) | 0.0036 (5) | 0.0135 (6) |
| O1 | 0.0586 (6) | 0.0485 (5) | 0.0657 (6) | 0.0301 (5) | 0.0198 (5) | 0.0259 (5) |
| O2 | 0.0658 (7) | 0.0529 (6) | 0.0680 (6) | 0.0225 (5) | 0.0167 (5) | 0.0374 (5) |
| O3 | 0.0766 (7) | 0.0571 (6) | 0.0694 (7) | 0.0392 (6) | 0.0293 (6) | 0.0371 (5) |
| O4 | 0.0598 (6) | 0.0541 (6) | 0.0554 (6) | 0.0336 (5) | 0.0097 (5) | 0.0177 (5) |
| O5 | 0.181 (2) | 0.1328 (17) | 0.1005 (13) | 0.0027 (15) | 0.0624 (14) | 0.0588 (12) |
| O6 | 0.212 (2) | 0.1014 (12) | 0.0919 (11) | 0.0126 (13) | 0.0041 (13) | 0.0687 (11) |
| C1 | 0.0579 (8) | 0.0514 (8) | 0.0478 (7) | 0.0030 (6) | −0.0001 (6) | 0.0193 (6) |
| C2 | 0.0845 (12) | 0.0638 (10) | 0.0494 (8) | 0.0089 (9) | −0.0052 (8) | 0.0264 (7) |
| C3 | 0.0971 (14) | 0.0556 (9) | 0.0515 (8) | 0.0105 (9) | 0.0159 (9) | 0.0280 (7) |
| C4 | 0.0753 (11) | 0.0606 (10) | 0.0676 (10) | 0.0017 (8) | 0.0239 (9) | 0.0287 (8) |
| C5 | 0.0531 (8) | 0.0571 (8) | 0.0553 (8) | 0.0070 (7) | 0.0109 (6) | 0.0209 (7) |
| C6 | 0.0510 (7) | 0.0393 (6) | 0.0364 (6) | 0.0113 (5) | 0.0102 (5) | 0.0131 (5) |
| C7 | 0.0440 (6) | 0.0350 (6) | 0.0491 (7) | 0.0139 (5) | 0.0080 (5) | 0.0157 (5) |
| C8 | 0.0373 (6) | 0.0334 (5) | 0.0390 (6) | 0.0113 (4) | 0.0073 (4) | 0.0139 (4) |
| C9 | 0.0417 (6) | 0.0365 (6) | 0.0401 (6) | 0.0141 (5) | 0.0074 (5) | 0.0126 (5) |
| C10 | 0.0462 (7) | 0.0436 (7) | 0.0486 (7) | 0.0187 (5) | 0.0152 (5) | 0.0178 (5) |
| C11 | 0.0305 (5) | 0.0442 (6) | 0.0386 (5) | 0.0149 (4) | 0.0137 (4) | 0.0211 (5) |
| C12 | 0.0436 (6) | 0.0423 (6) | 0.0388 (6) | 0.0177 (5) | 0.0119 (5) | 0.0230 (5) |
| C13 | 0.0400 (6) | 0.0438 (6) | 0.0413 (6) | 0.0083 (5) | 0.0116 (5) | 0.0221 (5) |
| C14 | 0.0534 (8) | 0.0445 (7) | 0.0499 (7) | 0.0040 (6) | 0.0077 (6) | 0.0190 (6) |
| C15 | 0.0499 (7) | 0.0350 (6) | 0.0403 (6) | 0.0085 (5) | 0.0014 (5) | 0.0102 (5) |
| C16 | 0.0597 (9) | 0.0499 (8) | 0.0527 (8) | 0.0211 (6) | 0.0097 (6) | 0.0205 (6) |
| C17 | 0.0697 (10) | 0.0567 (9) | 0.0513 (8) | 0.0109 (7) | 0.0181 (7) | 0.0132 (7) |
| C18 | 0.0912 (12) | 0.0417 (7) | 0.0373 (6) | −0.0004 (7) | 0.0020 (7) | 0.0130 (5) |
| C19 | 0.0953 (13) | 0.0524 (8) | 0.0544 (9) | 0.0241 (9) | −0.0070 (9) | 0.0219 (7) |
| C20 | 0.0632 (9) | 0.0554 (8) | 0.0547 (8) | 0.0252 (7) | 0.0043 (7) | 0.0177 (7) |
| S1—C11 | 1.7448 (13) | C3—C4 | 1.370 (3) |
| S1—C10 | 1.7951 (13) | C3—H3A | 0.9300 |
| N1—N2 | 1.3013 (15) | C4—C5 | 1.391 (2) |
| N1—C8 | 1.3616 (15) | C4—H4A | 0.9300 |
| N1—C6 | 1.4550 (16) | C5—C6 | 1.380 (2) |
| N2—O1 | 1.3693 (15) | C5—H5A | 0.9300 |
| N3—C11 | 1.3660 (14) | C7—C8 | 1.4242 (16) |
| N3—C12 | 1.3820 (17) | C8—C9 | 1.4572 (16) |
| N3—N7 | 1.4079 (15) | C9—C10 | 1.5165 (17) |
| N4—C13 | 1.2914 (17) | C10—H10A | 0.9700 |
| N4—N5 | 1.3797 (16) | C10—H10B | 0.9700 |
| N5—C11 | 1.2966 (15) | C12—C13 | 1.4615 (18) |
| N6—O6 | 1.205 (3) | C13—C14 | 1.5049 (19) |
| N6—O5 | 1.214 (3) | C14—C15 | 1.5112 (18) |
| N6—C18 | 1.472 (2) | C14—H14A | 0.9700 |
| N7—H2N7 | 0.90 (2) | C14—H14B | 0.9700 |
| N7—H1N7 | 0.89 (2) | C15—C16 | 1.381 (2) |
| O1—C7 | 1.4212 (16) | C15—C20 | 1.3856 (19) |
| O2—C7 | 1.1937 (16) | C16—C17 | 1.384 (2) |
| O3—C9 | 1.2083 (15) | C16—H16A | 0.9300 |
| O4—C12 | 1.2156 (15) | C17—C18 | 1.377 (2) |
| C1—C6 | 1.373 (2) | C17—H17A | 0.9300 |
| C1—C2 | 1.384 (2) | C18—C19 | 1.366 (3) |
| C1—H1A | 0.9300 | C19—C20 | 1.380 (2) |
| C2—C3 | 1.377 (3) | C19—H19A | 0.9300 |
| C2—H2A | 0.9300 | C20—H20A | 0.9300 |
| C11—S1—C10 | 100.23 (6) | O3—C9—C10 | 123.28 (11) |
| N2—N1—C8 | 114.78 (10) | C8—C9—C10 | 113.88 (10) |
| N2—N1—C6 | 114.59 (10) | C9—C10—S1 | 113.41 (9) |
| C8—N1—C6 | 130.62 (10) | C9—C10—H10A | 108.9 |
| N1—N2—O1 | 105.29 (10) | S1—C10—H10A | 108.9 |
| C11—N3—C12 | 121.18 (10) | C9—C10—H10B | 108.9 |
| C11—N3—N7 | 116.60 (11) | S1—C10—H10B | 108.9 |
| C12—N3—N7 | 121.80 (10) | H10A—C10—H10B | 107.7 |
| C13—N4—N5 | 120.91 (11) | N5—C11—N3 | 123.75 (12) |
| C11—N5—N4 | 118.18 (11) | N5—C11—S1 | 121.37 (9) |
| O6—N6—O5 | 122.9 (2) | N3—C11—S1 | 114.86 (9) |
| O6—N6—C18 | 118.8 (2) | O4—C12—N3 | 122.00 (12) |
| O5—N6—C18 | 118.2 (2) | O4—C12—C13 | 125.50 (12) |
| N3—N7—H2N7 | 106.2 (14) | N3—C12—C13 | 112.50 (10) |
| N3—N7—H1N7 | 104.2 (14) | N4—C13—C12 | 123.40 (12) |
| H2N7—N7—H1N7 | 107.5 (19) | N4—C13—C14 | 118.21 (12) |
| N2—O1—C7 | 110.84 (9) | C12—C13—C14 | 118.20 (11) |
| C6—C1—C2 | 118.12 (15) | C13—C14—C15 | 108.09 (10) |
| C6—C1—H1A | 120.9 | C13—C14—H14A | 110.1 |
| C2—C1—H1A | 120.9 | C15—C14—H14A | 110.1 |
| C3—C2—C1 | 120.27 (16) | C13—C14—H14B | 110.1 |
| C3—C2—H2A | 119.9 | C15—C14—H14B | 110.1 |
| C1—C2—H2A | 119.9 | H14A—C14—H14B | 108.4 |
| C4—C3—C2 | 120.72 (14) | C16—C15—C20 | 119.09 (13) |
| C4—C3—H3A | 119.6 | C16—C15—C14 | 121.16 (12) |
| C2—C3—H3A | 119.6 | C20—C15—C14 | 119.60 (13) |
| C3—C4—C5 | 120.24 (16) | C15—C16—C17 | 120.48 (14) |
| C3—C4—H4A | 119.9 | C15—C16—H16A | 119.8 |
| C5—C4—H4A | 119.9 | C17—C16—H16A | 119.8 |
| C6—C5—C4 | 117.79 (16) | C18—C17—C16 | 118.61 (16) |
| C6—C5—H5A | 121.1 | C18—C17—H17A | 120.7 |
| C4—C5—H5A | 121.1 | C16—C17—H17A | 120.7 |
| C1—C6—C5 | 122.84 (13) | C19—C18—C17 | 122.36 (14) |
| C1—C6—N1 | 119.32 (12) | C19—C18—N6 | 119.06 (17) |
| C5—C6—N1 | 117.71 (13) | C17—C18—N6 | 118.58 (19) |
| O2—C7—O1 | 120.32 (11) | C18—C19—C20 | 118.29 (15) |
| O2—C7—C8 | 136.17 (13) | C18—C19—H19A | 120.9 |
| O1—C7—C8 | 103.50 (10) | C20—C19—H19A | 120.9 |
| N1—C8—C7 | 105.59 (10) | C19—C20—C15 | 121.14 (16) |
| N1—C8—C9 | 126.62 (10) | C19—C20—H20A | 119.4 |
| C7—C8—C9 | 127.47 (11) | C15—C20—H20A | 119.4 |
| O3—C9—C8 | 122.84 (12) | ||
| C8—N1—N2—O1 | −0.65 (15) | C12—N3—C11—N5 | −3.89 (17) |
| C6—N1—N2—O1 | −179.61 (10) | N7—N3—C11—N5 | −176.56 (12) |
| C13—N4—N5—C11 | −0.56 (18) | C12—N3—C11—S1 | 174.64 (8) |
| N1—N2—O1—C7 | 0.50 (15) | N7—N3—C11—S1 | 1.97 (14) |
| C6—C1—C2—C3 | 1.2 (3) | C10—S1—C11—N5 | −5.61 (11) |
| C1—C2—C3—C4 | −1.7 (3) | C10—S1—C11—N3 | 175.82 (8) |
| C2—C3—C4—C5 | 0.9 (3) | C11—N3—C12—O4 | −177.39 (11) |
| C3—C4—C5—C6 | 0.4 (3) | N7—N3—C12—O4 | −5.09 (18) |
| C2—C1—C6—C5 | 0.1 (2) | C11—N3—C12—C13 | 2.88 (15) |
| C2—C1—C6—N1 | −175.51 (14) | N7—N3—C12—C13 | 175.17 (11) |
| C4—C5—C6—C1 | −0.9 (2) | N5—N4—C13—C12 | −0.10 (18) |
| C4—C5—C6—N1 | 174.80 (13) | N5—N4—C13—C14 | 174.79 (11) |
| N2—N1—C6—C1 | 124.32 (14) | O4—C12—C13—N4 | 179.22 (12) |
| C8—N1—C6—C1 | −54.43 (19) | N3—C12—C13—N4 | −1.05 (16) |
| N2—N1—C6—C5 | −51.51 (17) | O4—C12—C13—C14 | 4.33 (18) |
| C8—N1—C6—C5 | 129.74 (15) | N3—C12—C13—C14 | −175.94 (10) |
| N2—O1—C7—O2 | −179.23 (13) | N4—C13—C14—C15 | −92.98 (14) |
| N2—O1—C7—C8 | −0.19 (14) | C12—C13—C14—C15 | 82.18 (14) |
| N2—N1—C8—C7 | 0.54 (15) | C13—C14—C15—C16 | −94.98 (15) |
| C6—N1—C8—C7 | 179.29 (12) | C13—C14—C15—C20 | 80.63 (16) |
| N2—N1—C8—C9 | 174.43 (12) | C20—C15—C16—C17 | −1.6 (2) |
| C6—N1—C8—C9 | −6.8 (2) | C14—C15—C16—C17 | 174.06 (13) |
| O2—C7—C8—N1 | 178.62 (16) | C15—C16—C17—C18 | 0.7 (2) |
| O1—C7—C8—N1 | −0.19 (13) | C16—C17—C18—C19 | 0.6 (2) |
| O2—C7—C8—C9 | 4.8 (3) | C16—C17—C18—N6 | −178.61 (14) |
| O1—C7—C8—C9 | −174.00 (12) | O6—N6—C18—C19 | −1.9 (3) |
| N1—C8—C9—O3 | −0.7 (2) | O5—N6—C18—C19 | 176.04 (19) |
| C7—C8—C9—O3 | 171.92 (13) | O6—N6—C18—C17 | 177.31 (17) |
| N1—C8—C9—C10 | 178.87 (12) | O5—N6—C18—C17 | −4.7 (3) |
| C7—C8—C9—C10 | −8.56 (19) | C17—C18—C19—C20 | −1.0 (3) |
| O3—C9—C10—S1 | 10.82 (18) | N6—C18—C19—C20 | 178.23 (14) |
| C8—C9—C10—S1 | −168.69 (9) | C18—C19—C20—C15 | 0.1 (2) |
| C11—S1—C10—C9 | −88.06 (10) | C16—C15—C20—C19 | 1.2 (2) |
| N4—N5—C11—N3 | 2.54 (18) | C14—C15—C20—C19 | −174.51 (14) |
| N4—N5—C11—S1 | −175.89 (9) |
| H··· | ||||
| N7—H2N7···O4i | 0.89 (2) | 2.15 (2) | 3.0152 (19) | 163.5 (18) |
| N7—H1N7···N4ii | 0.89 (2) | 2.43 (2) | 3.1019 (17) | 133.1 (17) |
| N7—H1N7···N5ii | 0.89 (2) | 2.45 (2) | 3.0166 (16) | 122.5 (16) |
| C3—H3A···O5iii | 0.93 | 2.57 | 3.345 (3) | 141. |
| C14—H14A···O3iv | 0.97 | 2.53 | 3.4443 (18) | 157. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N7—H2 | 0.89 (2) | 2.15 (2) | 3.0152 (19) | 163.5 (18) |
| N7—H1 | 0.89 (2) | 2.43 (2) | 3.1019 (17) | 133.1 (17) |
| N7—H1 | 0.89 (2) | 2.45 (2) | 3.0166 (16) | 122.5 (16) |
| C3—H3 | 0.93 | 2.57 | 3.345 (3) | 141 |
| C14—H14 | 0.97 | 2.53 | 3.4443 (18) | 157 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .