Literature DB >> 21754449

(Z)-N-{3-[(6-Chloro-pyridin-3-yl)meth-yl]-1,3-thia-zolidin-2-yl-idene}cyanamide.

Jin-Sheng Gao, Jun Qiao, Ying-Hui Yu, Guang-Feng Hou.   

Abstract

The asymmetric unit of the title compound, C(10)H(9)ClN(4)S, common name thia-cloprid, comprises two mol-ecules. In both mol-ecules, the thia-zolidine rings are almost planar (with r.m.s. deviations of 0.016 and 0.065 Å) and form dihedral angles of 73.36 (6) and 70.25 (8)° with the 2-chloro-pyridine rings. In the crystal, inter-molecular C-H⋯N hydrogen bonds links the mol-ecules into chains propagating in [[Formula: see text]01].

Entities:  

Year:  2011        PMID: 21754449      PMCID: PMC3089287          DOI: 10.1107/S1600536811013316

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the title compound, a member of the neonicotinoide class of insecticides, see Maienfisch et al. (2003 ▶). For the synthesis, see Ishimitsu et al., (1991 ▶)

Experimental

Crystal data

C10H9ClN4S M = 252.73 Monoclinic, a = 7.1294 (14) Å b = 35.469 (7) Å c = 9.0211 (18) Å β = 97.80 (3)° V = 2260.1 (8) Å3 Z = 8 Mo Kα radiation μ = 0.50 mm−1 T = 293 K 0.31 × 0.29 × 0.20 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.863, T max = 0.909 21869 measured reflections 5151 independent reflections 3505 reflections with I > 2σ(I) R int = 0.046

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.137 S = 1.08 5151 reflections 289 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.29 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: CrystalClear (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811013316/kp2319sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811013316/kp2319Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H9ClN4SF(000) = 1040
Mr = 252.73Dx = 1.486 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 12991 reflections
a = 7.1294 (14) Åθ = 3.1–27.5°
b = 35.469 (7) ŵ = 0.50 mm1
c = 9.0211 (18) ÅT = 293 K
β = 97.80 (3)°Block, colourless
V = 2260.1 (8) Å30.31 × 0.29 × 0.20 mm
Z = 8
Rigaku R-AXIS RAPID diffractometer5151 independent reflections
Radiation source: fine-focus sealed tube3505 reflections with I > 2σ(I)
graphiteRint = 0.046
ω scansθmax = 27.5°, θmin = 3.1°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)h = −8→9
Tmin = 0.863, Tmax = 0.909k = −45→45
21869 measured reflectionsl = −11→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.137H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0595P)2 + 0.4995P] where P = (Fo2 + 2Fc2)/3
5151 reflections(Δ/σ)max < 0.001
289 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.8652 (3)0.04805 (6)0.2994 (3)0.0528 (6)
C20.7778 (4)0.05431 (7)0.4241 (3)0.0564 (6)
H20.83150.04610.51830.068*
C30.6087 (4)0.07309 (7)0.4038 (3)0.0541 (6)
H30.54430.07770.48500.065*
C40.5334 (3)0.08520 (5)0.2624 (3)0.0417 (5)
C50.6313 (4)0.07628 (6)0.1459 (3)0.0525 (6)
H50.57950.08350.05000.063*
C60.3545 (3)0.10860 (6)0.2362 (3)0.0486 (5)
H6A0.28560.10250.13900.058*
H6B0.27440.10240.31150.058*
C70.4452 (4)0.16785 (7)0.3852 (3)0.0586 (6)
H7A0.56770.15920.43310.070*
H7B0.35160.16220.45070.070*
C80.4506 (6)0.20899 (8)0.3572 (4)0.0831 (10)
H8A0.55730.22020.42000.100*
H8B0.33540.22070.38110.100*
C90.4189 (3)0.16902 (6)0.1222 (3)0.0422 (5)
C100.4177 (3)0.17589 (7)−0.1287 (3)0.0545 (6)
C111.3337 (3)0.05498 (7)0.7709 (3)0.0558 (6)
C121.2138 (4)0.04665 (8)0.8736 (3)0.0618 (6)
H121.23870.02680.94060.074*
C131.0549 (4)0.06898 (8)0.8737 (3)0.0609 (7)
H130.97120.06460.94230.073*
C141.0214 (3)0.09783 (7)0.7712 (3)0.0523 (6)
C151.1509 (4)0.10300 (8)0.6735 (3)0.0665 (7)
H151.12800.12220.60330.080*
C160.8483 (3)0.12283 (9)0.7672 (4)0.0678 (8)
H16A0.78180.12340.66600.081*
H16B0.76360.11210.83150.081*
C170.8939 (5)0.19245 (10)0.7102 (4)0.0840 (10)
H17A0.76640.19630.65950.101*
H17B0.97530.18660.63530.101*
C180.9605 (6)0.22673 (9)0.7904 (4)0.0853 (10)
H18A0.87990.24780.75560.102*
H18B1.08870.23250.77280.102*
C190.9155 (3)0.17075 (7)0.9595 (3)0.0464 (5)
C200.9267 (3)0.15741 (8)1.2059 (3)0.0593 (6)
Cl11.08715 (10)0.02601 (2)0.31970 (11)0.0811 (3)
Cl21.53924 (11)0.02813 (2)0.76846 (10)0.0809 (2)
N10.7967 (3)0.05776 (6)0.1620 (3)0.0592 (5)
N20.3963 (2)0.14899 (5)0.2425 (2)0.0432 (4)
N30.4000 (3)0.15412 (5)−0.0121 (2)0.0504 (5)
N40.4288 (4)0.19221 (7)−0.2375 (3)0.0777 (7)
N51.3080 (3)0.08234 (7)0.6720 (3)0.0658 (6)
N60.8957 (3)0.16118 (6)0.8155 (2)0.0540 (5)
N70.9051 (3)0.14604 (6)1.0652 (2)0.0551 (5)
N80.9439 (4)0.16423 (9)1.3319 (3)0.0864 (8)
S10.47264 (10)0.216369 (16)0.16494 (8)0.05802 (19)
S20.95422 (12)0.21907 (2)0.98475 (9)0.0698 (2)
U11U22U33U12U13U23
C10.0496 (12)0.0361 (10)0.0750 (18)0.0031 (10)0.0159 (12)0.0066 (11)
C20.0653 (14)0.0536 (13)0.0499 (15)0.0087 (12)0.0069 (12)0.0066 (11)
C30.0656 (14)0.0505 (12)0.0483 (14)0.0063 (11)0.0159 (11)0.0021 (11)
C40.0476 (11)0.0336 (9)0.0458 (13)−0.0015 (9)0.0138 (9)0.0020 (8)
C50.0664 (14)0.0486 (12)0.0450 (14)0.0081 (11)0.0160 (11)0.0053 (10)
C60.0465 (11)0.0424 (11)0.0580 (15)−0.0045 (9)0.0113 (10)0.0002 (10)
C70.0753 (16)0.0539 (13)0.0462 (14)−0.0019 (12)0.0061 (12)−0.0049 (11)
C80.133 (3)0.0574 (16)0.060 (2)0.0008 (18)0.0185 (19)−0.0117 (14)
C90.0367 (10)0.0416 (10)0.0476 (13)0.0033 (8)0.0029 (9)0.0007 (9)
C100.0555 (13)0.0566 (13)0.0501 (15)0.0046 (11)0.0032 (11)0.0001 (12)
C110.0568 (13)0.0556 (13)0.0579 (16)−0.0027 (11)0.0177 (12)−0.0152 (12)
C120.0708 (16)0.0605 (15)0.0575 (17)−0.0074 (13)0.0214 (13)−0.0025 (12)
C130.0601 (14)0.0736 (16)0.0541 (16)−0.0178 (13)0.0257 (12)−0.0177 (13)
C140.0495 (12)0.0619 (14)0.0465 (14)−0.0090 (11)0.0106 (10)−0.0205 (11)
C150.0728 (17)0.0727 (17)0.0591 (18)0.0088 (14)0.0279 (14)0.0006 (13)
C160.0482 (13)0.0861 (19)0.0685 (19)−0.0033 (13)0.0062 (12)−0.0297 (15)
C170.096 (2)0.112 (3)0.0459 (17)0.009 (2)0.0141 (15)0.0145 (17)
C180.106 (2)0.0733 (19)0.080 (2)0.0222 (18)0.0239 (19)0.0220 (17)
C190.0389 (10)0.0567 (13)0.0438 (13)0.0051 (10)0.0068 (9)−0.0056 (10)
C200.0484 (12)0.0786 (17)0.0525 (16)0.0114 (12)0.0125 (11)0.0098 (13)
Cl10.0568 (4)0.0582 (4)0.1311 (8)0.0141 (3)0.0232 (4)0.0113 (4)
Cl20.0785 (5)0.0756 (5)0.0938 (6)0.0180 (4)0.0307 (4)−0.0044 (4)
N10.0684 (13)0.0531 (11)0.0623 (15)0.0100 (10)0.0310 (11)0.0084 (10)
N20.0454 (9)0.0407 (9)0.0437 (11)0.0020 (8)0.0068 (8)−0.0008 (8)
N30.0559 (11)0.0496 (10)0.0450 (12)0.0029 (9)0.0045 (9)−0.0002 (9)
N40.0968 (18)0.0831 (17)0.0537 (15)0.0063 (14)0.0119 (13)0.0126 (13)
N50.0701 (14)0.0680 (13)0.0662 (15)0.0064 (11)0.0349 (12)−0.0018 (11)
N60.0504 (10)0.0702 (13)0.0413 (11)0.0095 (10)0.0058 (8)−0.0082 (9)
N70.0581 (11)0.0601 (12)0.0485 (13)0.0040 (10)0.0129 (9)0.0025 (9)
N80.0813 (17)0.133 (2)0.0470 (15)0.0174 (16)0.0147 (12)0.0044 (15)
S10.0681 (4)0.0420 (3)0.0615 (4)−0.0052 (3)−0.0003 (3)0.0019 (3)
S20.0892 (5)0.0566 (4)0.0649 (5)0.0004 (3)0.0145 (4)−0.0053 (3)
C1—N11.314 (3)C11—N51.314 (4)
C1—C21.376 (4)C11—C121.375 (4)
C1—Cl11.752 (2)C11—Cl21.750 (3)
C2—C31.368 (3)C12—C131.383 (4)
C2—H20.9300C12—H120.9300
C3—C41.383 (3)C13—C141.378 (4)
C3—H30.9300C13—H130.9300
C4—C51.375 (3)C14—C151.373 (4)
C4—C61.513 (3)C14—C161.516 (4)
C5—N11.340 (3)C15—N51.340 (4)
C5—H50.9300C15—H150.9300
C6—N21.463 (3)C16—N61.454 (3)
C6—H6A0.9700C16—H16A0.9700
C6—H6B0.9700C16—H16B0.9700
C7—N21.451 (3)C17—N61.459 (4)
C7—C81.482 (4)C17—C181.461 (5)
C7—H7A0.9700C17—H17A0.9700
C7—H7B0.9700C17—H17B0.9700
C8—S11.782 (3)C18—S21.781 (4)
C8—H8A0.9700C18—H18A0.9700
C8—H8B0.9700C18—H18B0.9700
C9—N31.312 (3)C19—N71.305 (3)
C9—N21.325 (3)C19—N61.331 (3)
C9—S11.754 (2)C19—S21.746 (2)
C10—N41.152 (3)C20—N81.152 (4)
C10—N31.324 (3)C20—N71.321 (3)
N1—C1—C2125.2 (2)C14—C13—C12119.5 (2)
N1—C1—Cl1115.5 (2)C14—C13—H13120.2
C2—C1—Cl1119.3 (2)C12—C13—H13120.2
C3—C2—C1117.2 (2)C15—C14—C13117.3 (2)
C3—C2—H2121.4C15—C14—C16121.5 (3)
C1—C2—H2121.4C13—C14—C16121.1 (3)
C2—C3—C4120.0 (2)N5—C15—C14124.7 (3)
C2—C3—H3120.0N5—C15—H15117.6
C4—C3—H3120.0C14—C15—H15117.6
C5—C4—C3117.4 (2)N6—C16—C14112.62 (19)
C5—C4—C6120.7 (2)N6—C16—H16A109.1
C3—C4—C6121.9 (2)C14—C16—H16A109.1
N1—C5—C4124.1 (2)N6—C16—H16B109.1
N1—C5—H5118.0C14—C16—H16B109.1
C4—C5—H5118.0H16A—C16—H16B107.8
N2—C6—C4111.60 (17)N6—C17—C18109.7 (3)
N2—C6—H6A109.3N6—C17—H17A109.7
C4—C6—H6A109.3C18—C17—H17A109.7
N2—C6—H6B109.3N6—C17—H17B109.7
C4—C6—H6B109.3C18—C17—H17B109.7
H6A—C6—H6B108.0H17A—C17—H17B108.2
N2—C7—C8108.2 (2)C17—C18—S2108.1 (2)
N2—C7—H7A110.1C17—C18—H18A110.1
C8—C7—H7A110.1S2—C18—H18A110.1
N2—C7—H7B110.1C17—C18—H18B110.1
C8—C7—H7B110.1S2—C18—H18B110.1
H7A—C7—H7B108.4H18A—C18—H18B108.4
C7—C8—S1108.5 (2)N7—C19—N6122.2 (2)
C7—C8—H8A110.0N7—C19—S2125.99 (19)
S1—C8—H8A110.0N6—C19—S2111.81 (18)
C7—C8—H8B110.0N8—C20—N7174.3 (3)
S1—C8—H8B110.0C1—N1—C5116.1 (2)
H8A—C8—H8B108.4C9—N2—C7116.01 (19)
N3—C9—N2122.1 (2)C9—N2—C6122.68 (19)
N3—C9—S1125.52 (18)C7—N2—C6120.61 (19)
N2—C9—S1112.34 (17)C9—N3—C10119.3 (2)
N4—C10—N3174.2 (3)C11—N5—C15115.9 (2)
N5—C11—C12125.0 (2)C19—N6—C16121.3 (2)
N5—C11—Cl2115.7 (2)C19—N6—C17115.6 (2)
C12—C11—Cl2119.3 (2)C16—N6—C17122.3 (2)
C11—C12—C13117.5 (3)C19—N7—C20119.1 (2)
C11—C12—H12121.3C9—S1—C891.61 (12)
C13—C12—H12121.3C19—S2—C1892.62 (14)
D—H···AD—HH···AD···AD—H···A
C3—H3···N5i0.932.553.459 (4)167
C13—H13···N1ii0.932.493.408 (4)169
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3⋯N5i0.932.553.459 (4)167
C13—H13⋯N1ii0.932.493.408 (4)169

Symmetry codes: (i) ; (ii) .

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