| Literature DB >> 21754435 |
Yi-Ling Hong1, Hua-Jie Tan, Liang Shen.
Abstract
In the title compound, C(20)H(26)N(2)O(4)S(2), the cyclo-hexane ring has a chair conformation. The two chiral C atoms are in S configurations. In the crystal, inter-molecular N-H⋯O hydrogen bonds link the mol-ecules into chains propagating in [001]. Weak inter-molecular C-H⋯O hydrogen bonds further stabilize the crystal packing.Entities:
Year: 2011 PMID: 21754435 PMCID: PMC3089204 DOI: 10.1107/S1600536811012372
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H26N2O4S2 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 5610 reflections |
| θ = 2.2–27.4° | |
| µ = 0.27 mm−1 | |
| Chunk, yellow | |
| 0.75 × 0.65 × 0.32 mm |
| Bruker SMART CCD diffractometer | 4196 independent reflections |
| Radiation source: fine-focus sealed tube | 3748 reflections with |
| graphite | |
| φ and ω scans | θmax = 26.0°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 9486 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.18 e Å−3 | |
| 4196 reflections | Δρmin = −0.24 e Å−3 |
| 256 parameters | Extinction correction: |
| 0 restraints | Extinction coefficient: 0.0129 (10) |
| Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983), 1706 Friedel pairs |
| Secondary atom site location: difference Fourier map | Flack parameter: 0.07 (7) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S2 | 0.67936 (6) | 0.34616 (4) | 0.33373 (4) | 0.05778 (17) | |
| S1 | 0.62809 (5) | 0.40875 (4) | 0.66645 (3) | 0.05630 (16) | |
| C14 | 0.54709 (19) | 0.41739 (18) | 0.34420 (13) | 0.0522 (5) | |
| O1 | 0.66322 (17) | 0.40834 (14) | 0.75630 (9) | 0.0696 (5) | |
| O4 | 0.6663 (2) | 0.24457 (14) | 0.37717 (13) | 0.0815 (6) | |
| C7 | 0.4973 (2) | 0.48007 (17) | 0.65910 (13) | 0.0546 (5) | |
| O3 | 0.70891 (17) | 0.34735 (14) | 0.24292 (10) | 0.0691 (5) | |
| N2 | 0.77908 (17) | 0.41378 (18) | 0.38123 (10) | 0.0600 (5) | |
| H102 | 0.8017 | 0.4755 | 0.3500 | 0.090* | |
| N1 | 0.72602 (17) | 0.47945 (16) | 0.61697 (10) | 0.0553 (5) | |
| H101 | 0.7469 | 0.5406 | 0.6526 | 0.083* | |
| O2 | 0.61429 (19) | 0.30761 (13) | 0.62249 (11) | 0.0717 (5) | |
| C1 | 0.71703 (19) | 0.49569 (17) | 0.52189 (12) | 0.0486 (5) | |
| H1 | 0.6373 | 0.4812 | 0.5038 | 0.058* | |
| C10 | 0.2880 (2) | 0.5933 (2) | 0.65482 (15) | 0.0641 (6) | |
| C13 | 0.1751 (3) | 0.6529 (3) | 0.6547 (2) | 0.0824 (8) | |
| H13A | 0.1154 | 0.6058 | 0.6764 | 0.124* | |
| H13B | 0.1565 | 0.6749 | 0.5964 | 0.124* | |
| H13C | 0.1808 | 0.7163 | 0.6911 | 0.124* | |
| C19 | 0.5374 (2) | 0.5203 (2) | 0.30984 (16) | 0.0624 (6) | |
| H19 | 0.6004 | 0.5527 | 0.2825 | 0.075* | |
| C11 | 0.2962 (2) | 0.4872 (2) | 0.62491 (19) | 0.0752 (7) | |
| H11 | 0.2306 | 0.4529 | 0.6030 | 0.090* | |
| C8 | 0.4911 (2) | 0.5865 (2) | 0.68795 (18) | 0.0765 (7) | |
| H8 | 0.5567 | 0.6212 | 0.7093 | 0.092* | |
| C2 | 0.7466 (3) | 0.6124 (2) | 0.50033 (16) | 0.0815 (9) | |
| H2A | 0.6980 | 0.6607 | 0.5345 | 0.098* | |
| H2B | 0.7301 | 0.6258 | 0.4394 | 0.098* | |
| C6 | 0.7972 (2) | 0.4147 (2) | 0.47615 (13) | 0.0631 (6) | |
| H6 | 0.7820 | 0.3414 | 0.4989 | 0.076* | |
| C18 | 0.4338 (2) | 0.5754 (2) | 0.31602 (18) | 0.0728 (7) | |
| H18 | 0.4279 | 0.6455 | 0.2933 | 0.087* | |
| C12 | 0.3992 (3) | 0.4310 (2) | 0.62680 (17) | 0.0719 (7) | |
| H12 | 0.4025 | 0.3597 | 0.6062 | 0.086* | |
| C17 | 0.3394 (2) | 0.5287 (2) | 0.35501 (17) | 0.0723 (7) | |
| C15 | 0.4543 (3) | 0.3685 (2) | 0.38376 (17) | 0.0733 (7) | |
| H15 | 0.4605 | 0.2985 | 0.4067 | 0.088* | |
| C20 | 0.2257 (3) | 0.5907 (3) | 0.3615 (2) | 0.1059 (11) | |
| H20A | 0.2108 | 0.6088 | 0.4212 | 0.159* | |
| H20B | 0.1641 | 0.5460 | 0.3396 | 0.159* | |
| H20C | 0.2305 | 0.6564 | 0.3277 | 0.159* | |
| C9 | 0.3878 (3) | 0.6408 (2) | 0.6850 (2) | 0.0810 (8) | |
| H9 | 0.3850 | 0.7128 | 0.7041 | 0.097* | |
| C16 | 0.3510 (3) | 0.4257 (3) | 0.38880 (19) | 0.0850 (8) | |
| H16 | 0.2878 | 0.3933 | 0.4159 | 0.102* | |
| C5 | 0.9229 (3) | 0.4441 (5) | 0.4944 (2) | 0.1246 (19) | |
| H5A | 0.9394 | 0.4311 | 0.5554 | 0.149* | |
| H5B | 0.9727 | 0.3968 | 0.4604 | 0.149* | |
| C4 | 0.9504 (3) | 0.5625 (6) | 0.4727 (2) | 0.156 (3) | |
| H4A | 1.0295 | 0.5782 | 0.4892 | 0.187* | |
| H4B | 0.9435 | 0.5733 | 0.4104 | 0.187* | |
| C3 | 0.8719 (4) | 0.6387 (4) | 0.5182 (2) | 0.1297 (18) | |
| H3A | 0.8881 | 0.7126 | 0.4992 | 0.156* | |
| H3B | 0.8861 | 0.6348 | 0.5803 | 0.156* |
| S2 | 0.0767 (4) | 0.0523 (3) | 0.0444 (3) | 0.0109 (3) | 0.0052 (3) | −0.0021 (2) |
| S1 | 0.0786 (4) | 0.0508 (3) | 0.0395 (2) | −0.0039 (3) | 0.0075 (3) | 0.0023 (2) |
| C14 | 0.0620 (13) | 0.0541 (11) | 0.0406 (10) | −0.0011 (10) | −0.0020 (9) | −0.0021 (10) |
| O1 | 0.0994 (13) | 0.0680 (9) | 0.0414 (8) | −0.0018 (10) | 0.0051 (8) | 0.0113 (7) |
| O4 | 0.1114 (16) | 0.0534 (9) | 0.0798 (12) | 0.0169 (10) | 0.0114 (11) | 0.0073 (8) |
| C7 | 0.0707 (14) | 0.0495 (10) | 0.0437 (11) | −0.0136 (10) | 0.0092 (11) | −0.0052 (9) |
| O3 | 0.0919 (13) | 0.0705 (10) | 0.0449 (8) | 0.0055 (10) | 0.0063 (8) | −0.0122 (7) |
| N2 | 0.0655 (12) | 0.0763 (12) | 0.0382 (9) | 0.0112 (11) | 0.0029 (8) | 0.0005 (9) |
| N1 | 0.0646 (11) | 0.0676 (11) | 0.0337 (8) | −0.0030 (9) | 0.0017 (8) | 0.0045 (8) |
| O2 | 0.0989 (14) | 0.0533 (8) | 0.0631 (10) | 0.0004 (9) | 0.0087 (10) | −0.0038 (8) |
| C1 | 0.0517 (11) | 0.0612 (11) | 0.0330 (9) | 0.0032 (9) | −0.0022 (8) | 0.0039 (9) |
| C10 | 0.0732 (15) | 0.0639 (13) | 0.0551 (13) | −0.0078 (12) | 0.0077 (11) | 0.0031 (11) |
| C13 | 0.0744 (17) | 0.0878 (18) | 0.085 (2) | −0.0004 (15) | 0.0022 (15) | 0.0123 (16) |
| C19 | 0.0597 (13) | 0.0589 (13) | 0.0687 (15) | −0.0012 (11) | 0.0004 (11) | 0.0099 (11) |
| C11 | 0.0691 (17) | 0.0690 (15) | 0.0875 (18) | −0.0214 (14) | −0.0050 (15) | −0.0062 (14) |
| C8 | 0.0723 (17) | 0.0602 (14) | 0.097 (2) | −0.0060 (13) | −0.0110 (15) | −0.0275 (14) |
| C2 | 0.130 (3) | 0.0718 (16) | 0.0428 (12) | −0.0146 (16) | −0.0041 (14) | 0.0086 (11) |
| C6 | 0.0666 (14) | 0.0855 (15) | 0.0373 (10) | 0.0252 (13) | 0.0002 (9) | 0.0033 (11) |
| C18 | 0.0702 (16) | 0.0680 (15) | 0.0803 (18) | 0.0080 (13) | −0.0010 (13) | 0.0064 (13) |
| C12 | 0.0838 (18) | 0.0548 (13) | 0.0771 (16) | −0.0185 (13) | 0.0036 (14) | −0.0131 (12) |
| C17 | 0.0653 (15) | 0.0912 (18) | 0.0604 (15) | 0.0078 (14) | −0.0004 (12) | −0.0065 (13) |
| C15 | 0.0838 (19) | 0.0674 (15) | 0.0688 (16) | −0.0057 (14) | 0.0116 (14) | 0.0111 (12) |
| C20 | 0.0752 (19) | 0.132 (3) | 0.110 (2) | 0.024 (2) | 0.0081 (19) | −0.007 (2) |
| C9 | 0.0863 (19) | 0.0603 (14) | 0.096 (2) | −0.0028 (14) | −0.0098 (16) | −0.0269 (14) |
| C16 | 0.0695 (18) | 0.110 (2) | 0.0755 (18) | −0.0133 (17) | 0.0182 (14) | 0.0057 (17) |
| C5 | 0.063 (2) | 0.257 (6) | 0.0537 (16) | 0.050 (3) | −0.0093 (14) | −0.016 (3) |
| C4 | 0.079 (2) | 0.334 (8) | 0.0541 (17) | −0.088 (4) | 0.0068 (16) | −0.014 (3) |
| C3 | 0.168 (4) | 0.169 (4) | 0.0517 (16) | −0.107 (3) | 0.013 (2) | −0.004 (2) |
| S2—O4 | 1.4212 (19) | C11—H11 | 0.9300 |
| S2—O3 | 1.4376 (16) | C8—C9 | 1.369 (4) |
| S2—N2 | 1.597 (2) | C8—H8 | 0.9300 |
| S2—C14 | 1.769 (2) | C2—C3 | 1.511 (6) |
| S1—O2 | 1.4212 (17) | C2—H2A | 0.9700 |
| S1—O1 | 1.4401 (16) | C2—H2B | 0.9700 |
| S1—N1 | 1.6166 (19) | C6—C5 | 1.524 (5) |
| S1—C7 | 1.751 (3) | C6—H6 | 0.9800 |
| C14—C15 | 1.372 (3) | C18—C17 | 1.371 (4) |
| C14—C19 | 1.372 (3) | C18—H18 | 0.9300 |
| C7—C12 | 1.377 (3) | C12—H12 | 0.9300 |
| C7—C8 | 1.380 (3) | C17—C16 | 1.371 (4) |
| N2—C6 | 1.475 (3) | C17—C20 | 1.523 (4) |
| N2—H102 | 0.9334 | C15—C16 | 1.389 (4) |
| N1—C1 | 1.479 (2) | C15—H15 | 0.9300 |
| N1—H101 | 0.9589 | C20—H20A | 0.9600 |
| C1—C2 | 1.508 (3) | C20—H20B | 0.9600 |
| C1—C6 | 1.530 (3) | C20—H20C | 0.9600 |
| C1—H1 | 0.9800 | C9—H9 | 0.9300 |
| C10—C9 | 1.373 (4) | C16—H16 | 0.9300 |
| C10—C11 | 1.384 (4) | C5—C4 | 1.523 (7) |
| C10—C13 | 1.497 (4) | C5—H5A | 0.9700 |
| C13—H13A | 0.9600 | C5—H5B | 0.9700 |
| C13—H13B | 0.9600 | C4—C3 | 1.478 (7) |
| C13—H13C | 0.9600 | C4—H4A | 0.9700 |
| C19—C18 | 1.379 (3) | C4—H4B | 0.9700 |
| C19—H19 | 0.9300 | C3—H3A | 0.9700 |
| C11—C12 | 1.376 (4) | C3—H3B | 0.9700 |
| O4—S2—O3 | 119.38 (11) | C1—C2—H2B | 109.1 |
| O4—S2—N2 | 108.47 (12) | C3—C2—H2B | 109.1 |
| O3—S2—N2 | 105.48 (11) | H2A—C2—H2B | 107.9 |
| O4—S2—C14 | 107.31 (12) | N2—C6—C5 | 108.6 (2) |
| O3—S2—C14 | 106.81 (10) | N2—C6—C1 | 111.93 (17) |
| N2—S2—C14 | 109.09 (10) | C5—C6—C1 | 109.9 (3) |
| O2—S1—O1 | 119.01 (10) | N2—C6—H6 | 108.8 |
| O2—S1—N1 | 108.82 (11) | C5—C6—H6 | 108.8 |
| O1—S1—N1 | 104.81 (10) | C1—C6—H6 | 108.8 |
| O2—S1—C7 | 107.92 (12) | C17—C18—C19 | 121.2 (3) |
| O1—S1—C7 | 107.91 (11) | C17—C18—H18 | 119.4 |
| N1—S1—C7 | 107.92 (10) | C19—C18—H18 | 119.4 |
| C15—C14—C19 | 120.6 (2) | C11—C12—C7 | 120.2 (2) |
| C15—C14—S2 | 120.10 (18) | C11—C12—H12 | 119.9 |
| C19—C14—S2 | 119.28 (18) | C7—C12—H12 | 119.9 |
| C12—C7—C8 | 119.1 (2) | C16—C17—C18 | 118.2 (3) |
| C12—C7—S1 | 121.16 (18) | C16—C17—C20 | 121.3 (3) |
| C8—C7—S1 | 119.76 (19) | C18—C17—C20 | 120.6 (3) |
| C6—N2—S2 | 124.00 (18) | C14—C15—C16 | 118.5 (2) |
| C6—N2—H102 | 117.6 | C14—C15—H15 | 120.7 |
| S2—N2—H102 | 112.8 | C16—C15—H15 | 120.7 |
| C1—N1—S1 | 119.21 (15) | C17—C20—H20A | 109.5 |
| C1—N1—H101 | 118.5 | C17—C20—H20B | 109.5 |
| S1—N1—H101 | 109.1 | H20A—C20—H20B | 109.5 |
| N1—C1—C2 | 109.21 (18) | C17—C20—H20C | 109.5 |
| N1—C1—C6 | 108.92 (17) | H20A—C20—H20C | 109.5 |
| C2—C1—C6 | 112.2 (2) | H20B—C20—H20C | 109.5 |
| N1—C1—H1 | 108.8 | C8—C9—C10 | 122.6 (2) |
| C2—C1—H1 | 108.8 | C8—C9—H9 | 118.7 |
| C6—C1—H1 | 108.8 | C10—C9—H9 | 118.7 |
| C9—C10—C11 | 117.0 (3) | C17—C16—C15 | 121.9 (3) |
| C9—C10—C13 | 121.8 (2) | C17—C16—H16 | 119.1 |
| C11—C10—C13 | 121.2 (3) | C15—C16—H16 | 119.1 |
| C10—C13—H13A | 109.5 | C4—C5—C6 | 112.6 (3) |
| C10—C13—H13B | 109.5 | C4—C5—H5A | 109.1 |
| H13A—C13—H13B | 109.5 | C6—C5—H5A | 109.1 |
| C10—C13—H13C | 109.5 | C4—C5—H5B | 109.1 |
| H13A—C13—H13C | 109.5 | C6—C5—H5B | 109.1 |
| H13B—C13—H13C | 109.5 | H5A—C5—H5B | 107.8 |
| C14—C19—C18 | 119.6 (2) | C3—C4—C5 | 111.8 (3) |
| C14—C19—H19 | 120.2 | C3—C4—H4A | 109.3 |
| C18—C19—H19 | 120.2 | C5—C4—H4A | 109.3 |
| C12—C11—C10 | 121.5 (2) | C3—C4—H4B | 109.3 |
| C12—C11—H11 | 119.2 | C5—C4—H4B | 109.3 |
| C10—C11—H11 | 119.2 | H4A—C4—H4B | 107.9 |
| C9—C8—C7 | 119.6 (2) | C4—C3—C2 | 111.6 (3) |
| C9—C8—H8 | 120.2 | C4—C3—H3A | 109.3 |
| C7—C8—H8 | 120.2 | C2—C3—H3A | 109.3 |
| C1—C2—C3 | 112.3 (3) | C4—C3—H3B | 109.3 |
| C1—C2—H2A | 109.1 | C2—C3—H3B | 109.3 |
| C3—C2—H2A | 109.1 | H3A—C3—H3B | 108.0 |
| O4—S2—C14—C15 | −4.0 (2) | C6—C1—C2—C3 | −54.0 (3) |
| O3—S2—C14—C15 | 125.1 (2) | S2—N2—C6—C5 | 155.9 (3) |
| N2—S2—C14—C15 | −121.3 (2) | S2—N2—C6—C1 | −82.5 (3) |
| O4—S2—C14—C19 | 178.14 (19) | N1—C1—C6—N2 | 170.8 (2) |
| O3—S2—C14—C19 | −52.7 (2) | C2—C1—C6—N2 | −68.2 (3) |
| N2—S2—C14—C19 | 60.8 (2) | N1—C1—C6—C5 | −68.4 (3) |
| O2—S1—C7—C12 | 8.9 (2) | C2—C1—C6—C5 | 52.6 (3) |
| O1—S1—C7—C12 | −120.9 (2) | C14—C19—C18—C17 | −0.9 (4) |
| N1—S1—C7—C12 | 126.37 (19) | C10—C11—C12—C7 | 0.1 (4) |
| O2—S1—C7—C8 | −172.6 (2) | C8—C7—C12—C11 | −1.1 (4) |
| O1—S1—C7—C8 | 57.6 (2) | S1—C7—C12—C11 | 177.3 (2) |
| N1—S1—C7—C8 | −55.2 (2) | C19—C18—C17—C16 | 0.8 (4) |
| O4—S2—N2—C6 | −37.9 (2) | C19—C18—C17—C20 | 179.9 (3) |
| O3—S2—N2—C6 | −166.88 (18) | C19—C14—C15—C16 | −0.5 (4) |
| C14—S2—N2—C6 | 78.7 (2) | S2—C14—C15—C16 | −178.3 (2) |
| O2—S1—N1—C1 | 51.2 (2) | C7—C8—C9—C10 | 0.6 (5) |
| O1—S1—N1—C1 | 179.49 (16) | C11—C10—C9—C8 | −1.6 (4) |
| C7—S1—N1—C1 | −65.69 (18) | C13—C10—C9—C8 | 178.0 (3) |
| S1—N1—C1—C2 | 137.8 (2) | C18—C17—C16—C15 | −0.5 (4) |
| S1—N1—C1—C6 | −99.4 (2) | C20—C17—C16—C15 | −179.7 (3) |
| C15—C14—C19—C18 | 0.7 (4) | C14—C15—C16—C17 | 0.4 (4) |
| S2—C14—C19—C18 | 178.6 (2) | N2—C6—C5—C4 | 69.8 (3) |
| C9—C10—C11—C12 | 1.2 (4) | C1—C6—C5—C4 | −53.0 (3) |
| C13—C10—C11—C12 | −178.4 (3) | C6—C5—C4—C3 | 55.0 (4) |
| C12—C7—C8—C9 | 0.8 (4) | C5—C4—C3—C2 | −54.5 (4) |
| S1—C7—C8—C9 | −177.7 (2) | C1—C2—C3—C4 | 54.7 (4) |
| N1—C1—C2—C3 | 66.9 (3) |
| H··· | ||||
| N1—H101···O3i | 0.96 | 2.02 | 2.971 (3) | 171 |
| N2—H102···O1ii | 0.93 | 2.07 | 2.982 (3) | 167 |
| C11—H11···O4iii | 0.93 | 2.55 | 3.214 (3) | 129 |
| C9—H9···O1iv | 0.93 | 2.54 | 3.452 (3) | 169 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H101⋯O3i | 0.96 | 2.02 | 2.971 (3) | 171 |
| N2—H102⋯O1ii | 0.93 | 2.07 | 2.982 (3) | 167 |
| C11—H11⋯O4iii | 0.93 | 2.55 | 3.214 (3) | 129 |
| C9—H9⋯O1iv | 0.93 | 2.54 | 3.452 (3) | 169 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .