Literature DB >> 21754363

(E)-1-(2,4-Dinitro-phen-yl)-2-[1-(thio-phen-2-yl)ethyl-idene]hydrazine.

Hoong-Kun Fun, Patcharaporn Jansrisewangwong, Suchada Chantrapromma.   

Abstract

The mol-ecule of the title compound, C(12)H(10)N(4)O(4)S, is slightly twisted, with a dihedral angle of 8.23 (9)° between the benzene and thio-phene rings. One nitro group is co-planar [O-N-C-C torsion angles = -0.5 (3) and -1.9 (3)°] whereas the other is slightly twisted with respect to the benzene ring [O-N-C-C torsion angles = -5.1 (3) and -5.7 (3)°]. In the crystal, the mol-ecules are linked by weak C-H⋯O inter-actions into screw chains along the b axis. The mol-ecular conformation is consolidated by an intra-molecular N-H⋯O hydrogen bond.

Entities:  

Year:  2011        PMID: 21754363      PMCID: PMC3089201          DOI: 10.1107/S1600536811011135

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see: Allen et al. (1987 ▶). For related structures, see: Chantrapromma et al. (2010 ▶); Fun et al. (2010 ▶); Jansrisewangwong et al. (2010 ▶); Shan et al. (2008 ▶). For background to and the biological activity of hydrazones, see: Baughman et al. (2004 ▶); Bedia et al. (2006 ▶); El-Tabl et al. (2008) ▶; Ramamohan et al. (1995 ▶); Rollas & Küçükgüzel (2007 ▶). For the stability of the temperature controller used in the data collection, see Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C12H10N4O4S M = 306.30 Monoclinic, a = 9.4868 (5) Å b = 15.3912 (8) Å c = 8.9756 (4) Å β = 91.672 (2)° V = 1310.00 (11) Å3 Z = 4 Mo Kα radiation μ = 0.27 mm−1 T = 100 K 0.60 × 0.19 × 0.16 mm

Data collection

Bruker APEXII CCD area detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.854, T max = 0.959 10366 measured reflections 2414 independent reflections 2176 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.109 S = 1.08 2414 reflections 195 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.38 e Å−3 Δρmin = −0.44 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811011135/rz2573sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811011135/rz2573Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H10N4O4SF(000) = 632
Mr = 306.30Dx = 1.553 Mg m3
Monoclinic, P21/cMelting point = 516–518 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 9.4868 (5) ÅCell parameters from 2414 reflections
b = 15.3912 (8) Åθ = 2.2–25.5°
c = 8.9756 (4) ŵ = 0.27 mm1
β = 91.672 (2)°T = 100 K
V = 1310.00 (11) Å3Block, orange
Z = 40.60 × 0.19 × 0.16 mm
Bruker APEXII CCD area detector diffractometer2414 independent reflections
Radiation source: sealed tube2176 reflections with I > 2σ(I)
graphiteRint = 0.027
φ and ω scansθmax = 25.5°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −10→11
Tmin = 0.854, Tmax = 0.959k = −18→14
10366 measured reflectionsl = −10→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.109H atoms treated by a mixture of independent and constrained refinement
S = 1.08w = 1/[σ2(Fo2) + (0.0504P)2 + 1.3252P] where P = (Fo2 + 2Fc2)/3
2414 reflections(Δ/σ)max < 0.001
195 parametersΔρmax = 0.38 e Å3
0 restraintsΔρmin = −0.44 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 120.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.18528 (6)0.07603 (4)1.08312 (6)0.02114 (18)
O10.38055 (16)0.48642 (10)0.89817 (17)0.0234 (4)
O20.5358 (2)0.53354 (10)0.7464 (2)0.0367 (5)
O30.82477 (16)0.34691 (11)0.46978 (17)0.0263 (4)
O40.82742 (17)0.20890 (11)0.51711 (18)0.0295 (4)
N10.29668 (17)0.24567 (11)1.00495 (18)0.0165 (4)
N20.35684 (18)0.31993 (13)0.9518 (2)0.0169 (4)
H1N20.328 (2)0.3673 (18)0.967 (3)0.018 (6)*
N30.47704 (19)0.47362 (12)0.8097 (2)0.0219 (4)
N40.78273 (18)0.28269 (13)0.53639 (19)0.0212 (4)
C10.4601 (2)0.31302 (13)0.8510 (2)0.0150 (4)
C20.5214 (2)0.38567 (13)0.7812 (2)0.0165 (4)
C30.6272 (2)0.37572 (14)0.6779 (2)0.0185 (5)
H3A0.66620.42390.63220.022*
C40.6724 (2)0.29369 (14)0.6451 (2)0.0170 (4)
C50.6148 (2)0.22010 (14)0.7110 (2)0.0169 (4)
H5A0.64690.16490.68660.020*
C60.5112 (2)0.23004 (13)0.8115 (2)0.0158 (4)
H6A0.47310.18100.85530.019*
C70.2011 (2)0.25572 (14)1.1041 (2)0.0166 (4)
C80.1380 (2)0.17563 (14)1.1560 (2)0.0173 (4)
C90.0380 (2)0.16528 (15)1.2632 (2)0.0202 (5)
H9A−0.00170.21131.31440.024*
C100.0020 (2)0.07644 (14)1.2874 (2)0.0188 (5)
H10A−0.06280.05811.35650.023*
C110.0736 (2)0.02170 (16)1.1973 (2)0.0237 (5)
H11A0.0630−0.03841.19770.028*
C120.1551 (2)0.34159 (14)1.1648 (2)0.0211 (5)
H12A0.23640.37401.19860.032*
H12B0.09410.33211.24680.032*
H12C0.10540.37361.08800.032*
U11U22U33U12U13U23
S10.0239 (3)0.0203 (3)0.0198 (3)−0.0021 (2)0.0103 (2)−0.0022 (2)
O10.0255 (8)0.0191 (8)0.0262 (8)0.0024 (6)0.0095 (7)−0.0037 (6)
O20.0487 (11)0.0151 (9)0.0478 (11)−0.0032 (8)0.0247 (9)0.0050 (8)
O30.0254 (8)0.0333 (10)0.0206 (8)−0.0092 (7)0.0095 (6)0.0043 (7)
O40.0300 (9)0.0300 (10)0.0297 (9)0.0039 (7)0.0190 (7)−0.0033 (7)
N10.0174 (8)0.0171 (9)0.0152 (8)−0.0018 (7)0.0052 (7)−0.0004 (7)
N20.0190 (9)0.0125 (10)0.0194 (9)0.0006 (8)0.0072 (7)−0.0015 (7)
N30.0272 (10)0.0163 (10)0.0225 (9)−0.0019 (8)0.0058 (8)0.0020 (8)
N40.0188 (9)0.0277 (11)0.0174 (9)−0.0020 (8)0.0063 (7)−0.0013 (8)
C10.0150 (9)0.0188 (11)0.0113 (9)−0.0003 (8)0.0024 (7)−0.0001 (8)
C20.0181 (10)0.0142 (10)0.0173 (10)−0.0011 (8)0.0035 (8)−0.0003 (8)
C30.0205 (10)0.0188 (11)0.0162 (10)−0.0045 (9)0.0026 (8)0.0037 (8)
C40.0160 (10)0.0234 (12)0.0120 (9)−0.0024 (9)0.0075 (8)0.0008 (8)
C50.0182 (10)0.0173 (11)0.0152 (10)0.0023 (8)0.0029 (8)−0.0026 (8)
C60.0182 (10)0.0147 (10)0.0148 (9)−0.0012 (8)0.0048 (8)0.0009 (8)
C70.0172 (10)0.0199 (11)0.0127 (9)0.0008 (8)0.0020 (8)−0.0018 (8)
C80.0160 (10)0.0216 (12)0.0143 (10)0.0004 (8)0.0031 (8)−0.0027 (8)
C90.0187 (10)0.0261 (12)0.0163 (10)0.0004 (9)0.0065 (8)−0.0025 (9)
C100.0168 (10)0.0256 (12)0.0146 (10)−0.0032 (9)0.0094 (8)0.0001 (9)
C110.0251 (11)0.0236 (12)0.0229 (11)−0.0064 (9)0.0076 (9)0.0018 (9)
C120.0228 (11)0.0219 (12)0.0191 (11)0.0001 (9)0.0093 (9)−0.0025 (9)
S1—C111.714 (2)C3—H3A0.9300
S1—C81.731 (2)C4—C51.396 (3)
O1—N31.245 (2)C5—C61.362 (3)
O2—N31.226 (2)C5—H5A0.9300
O3—N41.228 (2)C6—H6A0.9300
O4—N41.226 (2)C7—C81.453 (3)
N1—C71.298 (3)C7—C121.499 (3)
N1—N21.370 (3)C8—C91.380 (3)
N2—C11.357 (3)C9—C101.428 (3)
N2—H1N20.79 (3)C9—H9A0.9300
N3—C21.443 (3)C10—C111.363 (3)
N4—C41.462 (3)C10—H10A0.9300
C1—C21.415 (3)C11—H11A0.9300
C1—C61.415 (3)C12—H12A0.9600
C2—C31.394 (3)C12—H12B0.9600
C3—C41.368 (3)C12—H12C0.9600
C11—S1—C891.98 (11)C4—C5—H5A120.4
C7—N1—N2116.47 (18)C5—C6—C1121.80 (19)
C1—N2—N1118.89 (18)C5—C6—H6A119.1
C1—N2—H1N2116.4 (18)C1—C6—H6A119.1
N1—N2—H1N2124.2 (18)N1—C7—C8114.90 (19)
O2—N3—O1121.94 (18)N1—C7—C12124.81 (19)
O2—N3—C2119.03 (18)C8—C7—C12120.30 (18)
O1—N3—C2119.03 (17)C9—C8—C7128.3 (2)
O4—N4—O3123.94 (18)C9—C8—S1110.63 (16)
O4—N4—C4117.31 (18)C7—C8—S1121.11 (15)
O3—N4—C4118.75 (18)C8—C9—C10112.89 (19)
N2—C1—C2123.19 (19)C8—C9—H9A123.6
N2—C1—C6119.84 (18)C10—C9—H9A123.6
C2—C1—C6116.98 (18)C11—C10—C9112.11 (19)
C3—C2—C1121.38 (19)C11—C10—H10A123.9
C3—C2—N3116.11 (18)C9—C10—H10A123.9
C1—C2—N3122.50 (18)C10—C11—S1112.39 (18)
C4—C3—C2118.73 (19)C10—C11—H11A123.8
C4—C3—H3A120.6S1—C11—H11A123.8
C2—C3—H3A120.6C7—C12—H12A109.5
C3—C4—C5121.90 (19)C7—C12—H12B109.5
C3—C4—N4119.07 (19)H12A—C12—H12B109.5
C5—C4—N4119.03 (19)C7—C12—H12C109.5
C6—C5—C4119.21 (19)H12A—C12—H12C109.5
C6—C5—H5A120.4H12B—C12—H12C109.5
C7—N1—N2—C1178.22 (17)C3—C4—C5—C6−0.4 (3)
N1—N2—C1—C2175.14 (17)N4—C4—C5—C6−179.49 (17)
N1—N2—C1—C6−4.9 (3)C4—C5—C6—C10.0 (3)
N2—C1—C2—C3−179.90 (18)N2—C1—C6—C5−179.89 (18)
C6—C1—C2—C30.2 (3)C2—C1—C6—C50.1 (3)
N2—C1—C2—N3−1.2 (3)N2—N1—C7—C8178.99 (16)
C6—C1—C2—N3178.88 (17)N2—N1—C7—C12−1.1 (3)
O2—N3—C2—C3−1.9 (3)N1—C7—C8—C9177.69 (19)
O1—N3—C2—C3178.29 (17)C12—C7—C8—C9−2.2 (3)
O2—N3—C2—C1179.28 (19)N1—C7—C8—S1−2.2 (2)
O1—N3—C2—C1−0.5 (3)C12—C7—C8—S1177.89 (15)
C1—C2—C3—C4−0.5 (3)C11—S1—C8—C9−0.67 (16)
N3—C2—C3—C4−179.26 (17)C11—S1—C8—C7179.21 (17)
C2—C3—C4—C50.6 (3)C7—C8—C9—C10−178.97 (19)
C2—C3—C4—N4179.69 (17)S1—C8—C9—C100.9 (2)
O4—N4—C4—C3175.19 (18)C8—C9—C10—C11−0.7 (3)
O3—N4—C4—C3−5.1 (3)C9—C10—C11—S10.2 (2)
O4—N4—C4—C5−5.7 (3)C8—S1—C11—C100.27 (17)
O3—N4—C4—C5174.08 (18)
D—H···AD—HH···AD···AD—H···A
N2—H1N2···O10.79 (3)2.00 (3)2.618 (3)134 (2)
C6—H6A···O2i0.932.453.099 (3)127
C9—H9A···O4ii0.932.473.147 (2)129
C11—H11A···O3i0.932.573.240 (3)129
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H1N2⋯O10.79 (3)2.00 (3)2.618 (3)134 (2)
C6—H6A⋯O2i0.932.453.099 (3)127
C9—H9A⋯O4ii0.932.473.147 (2)129
C11—H11A⋯O3i0.932.573.240 (3)129

Symmetry codes: (i) ; (ii) .

  10 in total

1.  2,4-Dinitrophenylhydrazones of 2,4-dihydroxybenzaldehyde, 2,4-dihydroxyacetophenone and 2,4-dihydroxybenzophenone.

Authors:  Russell G Baughman; Kenneth L Martin; Rajendra K Singh; James O Stoffer
Journal:  Acta Crystallogr C       Date:  2004-01-10       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis and characterization of novel hydrazide-hydrazones and the study of their structure-antituberculosis activity.

Authors:  Koçyiğit-Kaymakçioğlu Bedia; Oruç Elçin; Unsalan Seda; Kandemirli Fatma; Shvets Nathaly; Rollas Sevim; Anatholy Dimoglo
Journal:  Eur J Med Chem       Date:  2006-08-17       Impact factor: 6.514

4.  (E)-2-Furyl methyl ketone 2,4-dinitro-phenyl-hydrazone.

Authors:  Shang Shan; Yu-Liang Tian; Shan-Heng Wang; Wen-Long Wang; Ying-Li Xu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-24

Review 5.  Biological activities of hydrazone derivatives.

Authors:  Sevim Rollas; S Güniz Küçükgüzel
Journal:  Molecules       Date:  2007-08-17       Impact factor: 4.411

6.  Synthesis, spectroscopic characterization and biological activity of the metal complexes of the Schiff base derived from phenylaminoacetohydrazide and dibenzoylmethane.

Authors:  Abdou Saad El-Tabl; Fathey A El-Saied; Winfried Plass; Ahmed Noman Al-Hakimi
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2007-11-22       Impact factor: 4.098

7.  (E,E)-1,2-Bis(2,4,6-trimeth-oxy-benzyl-idene)hydrazine.

Authors:  Hoong-Kun Fun; Patcharaporn Jansrisewangwong; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-25

8.  (E,E)-1,2-Bis[1-(2-bromo-phen-yl)ethyl-idene]hydrazine.

Authors:  Patcharaporn Jansrisewangwong; Suchada Chantrapromma; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-31

9.  (1E,2E)-1,2-Bis[1-(2-methoxy-phen-yl)ethyl-idene]hydrazine.

Authors:  Suchada Chantrapromma; Patcharaporn Jansrisewangwong; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-31

10.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  10 in total
  2 in total

1.  (E)-1-(2,4-Dinitro-phen-yl)-2-[1-(2-meth-oxy-phen-yl)ethyl-idene]hydrazine.

Authors:  Hoong-Kun Fun; Boonlerd Nilwanna; Patcharaporn Jansrisewangwong; Thawanrat Kobkeatthawin; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-05

2.  (E)-1-(2,4-Dinitro-phen-yl)-2-[1-(2-nitro-phen-yl)ethyl-idene]hydrazine.

Authors:  Boonlerd Nilwanna; Suchada Chantrapromma; Patcharaporn Jansrisewangwong; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-29
  2 in total

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