| Literature DB >> 21754346 |
Abstract
In the title compound, [CdCl(2)(C(13)H(10)N(6))], the 2-amino-4,6-bis(pyridin-2-yl)-1,3,5-triazine (HABPT) ligand adopts a tridentate tripyridyl coordination mode. The Cd(II) atom is five-coordinated by three N atoms from the HABPT ligand and two chloride ions. In the crystal, mol-ecules are linked via N-H⋯N, N-H⋯Cl and C-H⋯Cl hydrogen bonds into a supra-molecular network.Entities:
Year: 2011 PMID: 21754346 PMCID: PMC3089071 DOI: 10.1107/S1600536811012517
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [CdCl2(C13H10N6)] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2588 reflections | |
| θ = 2.2–25.0° | |
| µ = 1.80 mm−1 | |
| α = 82.5151 (9)° | |
| β = 65.636 (1)° | Block, colourless |
| γ = 82.798 (1)° | 0.34 × 0.31 × 0.28 mm |
| Bruker SMART APEX CCD detector diffractometer | 2588 independent reflections |
| Radiation source: fine-focus sealed tube | 2499 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.0°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 5102 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2588 reflections | (Δ/σ)max = 0.001 |
| 199 parameters | Δρmax = 0.28 e Å−3 |
| 0 restraints | Δρmin = −0.30 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cd | 0.21372 (2) | 0.386656 (17) | 0.788019 (17) | 0.03420 (8) | |
| Cl1 | 0.22830 (10) | 0.26193 (9) | 1.00530 (7) | 0.05660 (19) | |
| Cl2 | 0.41551 (8) | 0.26525 (8) | 0.58040 (7) | 0.04683 (16) | |
| N1 | 0.2999 (2) | 0.6218 (2) | 0.7893 (2) | 0.0354 (4) | |
| N2 | 0.0652 (2) | 0.5692 (2) | 0.7109 (2) | 0.0316 (4) | |
| N3 | 0.0354 (2) | 0.8157 (2) | 0.6236 (2) | 0.0307 (4) | |
| N4 | −0.1444 (2) | 0.6385 (2) | 0.6264 (2) | 0.0332 (4) | |
| N5 | −0.0378 (2) | 0.2992 (2) | 0.7962 (2) | 0.0352 (4) | |
| N6 | −0.1636 (3) | 0.8735 (2) | 0.5305 (2) | 0.0404 (5) | |
| H6A | −0.1322 | 0.9668 | 0.5070 | 0.048* | |
| H6B | −0.2468 | 0.8494 | 0.5095 | 0.048* | |
| C1 | 0.4108 (3) | 0.6446 (3) | 0.8398 (3) | 0.0444 (6) | |
| H1A | 0.4555 | 0.5567 | 0.8820 | 0.053* | |
| C2 | 0.4571 (3) | 0.7822 (3) | 0.8394 (3) | 0.0472 (6) | |
| H2A | 0.5370 | 0.7896 | 0.8800 | 0.057* | |
| C3 | 0.3859 (3) | 0.9019 (3) | 0.7847 (3) | 0.0467 (6) | |
| H3A | 0.4194 | 0.9989 | 0.7835 | 0.056* | |
| C4 | 0.2714 (3) | 0.8806 (3) | 0.7307 (3) | 0.0377 (5) | |
| H4A | 0.2264 | 0.9664 | 0.6864 | 0.045* | |
| C5 | 0.2318 (3) | 0.7398 (3) | 0.7343 (2) | 0.0303 (5) | |
| C6 | 0.1044 (3) | 0.7081 (2) | 0.6848 (2) | 0.0290 (5) | |
| C7 | −0.0883 (3) | 0.7746 (3) | 0.5937 (2) | 0.0321 (5) | |
| C8 | −0.0629 (3) | 0.5416 (2) | 0.6838 (2) | 0.0303 (5) | |
| C9 | −0.1177 (3) | 0.3903 (2) | 0.7273 (2) | 0.0311 (5) | |
| C10 | −0.2455 (3) | 0.3474 (3) | 0.7005 (3) | 0.0381 (5) | |
| H10A | −0.3033 | 0.4136 | 0.6498 | 0.046* | |
| C11 | −0.2923 (3) | 0.2053 (3) | 0.7456 (3) | 0.0481 (6) | |
| H11A | −0.3814 | 0.1696 | 0.7309 | 0.058* | |
| C12 | −0.2127 (3) | 0.1126 (3) | 0.8178 (3) | 0.0478 (6) | |
| H12A | −0.2415 | 0.0132 | 0.8551 | 0.057* | |
| C13 | −0.0864 (3) | 0.1634 (3) | 0.8405 (3) | 0.0427 (6) | |
| H13A | −0.0270 | 0.0998 | 0.8914 | 0.051* |
| Cd | 0.03892 (12) | 0.02984 (12) | 0.03786 (12) | 0.00290 (8) | −0.02185 (9) | −0.00009 (8) |
| Cl1 | 0.0672 (4) | 0.0623 (5) | 0.0399 (3) | 0.0064 (4) | −0.0279 (3) | 0.0077 (3) |
| Cl2 | 0.0430 (3) | 0.0568 (4) | 0.0433 (3) | 0.0013 (3) | −0.0188 (3) | −0.0137 (3) |
| N1 | 0.0387 (10) | 0.0315 (11) | 0.0427 (11) | 0.0007 (8) | −0.0245 (9) | −0.0014 (8) |
| N2 | 0.0321 (10) | 0.0272 (10) | 0.0403 (10) | −0.0013 (8) | −0.0199 (8) | −0.0015 (8) |
| N3 | 0.0352 (10) | 0.0268 (10) | 0.0355 (10) | −0.0027 (8) | −0.0204 (8) | 0.0005 (8) |
| N4 | 0.0390 (10) | 0.0284 (10) | 0.0389 (10) | −0.0042 (8) | −0.0236 (9) | 0.0023 (8) |
| N5 | 0.0368 (10) | 0.0294 (11) | 0.0401 (11) | −0.0015 (8) | −0.0180 (9) | 0.0021 (8) |
| N6 | 0.0485 (12) | 0.0314 (11) | 0.0551 (13) | −0.0068 (9) | −0.0372 (11) | 0.0088 (9) |
| C1 | 0.0432 (14) | 0.0467 (16) | 0.0534 (16) | 0.0046 (12) | −0.0312 (13) | −0.0062 (12) |
| C2 | 0.0435 (14) | 0.0562 (18) | 0.0551 (16) | −0.0070 (12) | −0.0313 (13) | −0.0081 (13) |
| C3 | 0.0494 (15) | 0.0447 (16) | 0.0565 (16) | −0.0134 (12) | −0.0295 (13) | −0.0030 (12) |
| C4 | 0.0429 (13) | 0.0329 (13) | 0.0436 (13) | −0.0066 (10) | −0.0237 (11) | 0.0003 (10) |
| C5 | 0.0294 (11) | 0.0331 (13) | 0.0303 (11) | −0.0029 (9) | −0.0141 (9) | −0.0025 (9) |
| C6 | 0.0315 (11) | 0.0275 (12) | 0.0300 (11) | −0.0012 (9) | −0.0147 (9) | −0.0026 (9) |
| C7 | 0.0358 (12) | 0.0307 (12) | 0.0325 (11) | −0.0027 (9) | −0.0172 (10) | −0.0001 (9) |
| C8 | 0.0328 (11) | 0.0278 (12) | 0.0317 (11) | −0.0017 (9) | −0.0149 (9) | −0.0017 (9) |
| C9 | 0.0323 (11) | 0.0279 (12) | 0.0333 (11) | −0.0016 (9) | −0.0136 (9) | −0.0024 (9) |
| C10 | 0.0375 (12) | 0.0340 (13) | 0.0467 (14) | −0.0033 (10) | −0.0211 (11) | −0.0027 (10) |
| C11 | 0.0459 (15) | 0.0414 (15) | 0.0608 (17) | −0.0142 (12) | −0.0233 (13) | −0.0007 (13) |
| C12 | 0.0489 (15) | 0.0310 (14) | 0.0585 (17) | −0.0117 (11) | −0.0168 (13) | 0.0048 (12) |
| C13 | 0.0440 (14) | 0.0315 (13) | 0.0474 (14) | −0.0008 (11) | −0.0166 (12) | 0.0065 (11) |
| Cd—N2 | 2.2679 (18) | C1—C2 | 1.378 (4) |
| Cd—N1 | 2.387 (2) | C1—H1A | 0.9845 |
| Cd—Cl1 | 2.4176 (7) | C2—C3 | 1.373 (4) |
| Cd—N5 | 2.433 (2) | C2—H2A | 0.9723 |
| Cd—Cl2 | 2.4431 (7) | C3—C4 | 1.386 (3) |
| N1—C1 | 1.336 (3) | C3—H3A | 0.9727 |
| N1—C5 | 1.349 (3) | C4—C5 | 1.376 (3) |
| N2—C6 | 1.331 (3) | C4—H4A | 0.9838 |
| N2—C8 | 1.337 (3) | C5—C6 | 1.489 (3) |
| N3—C6 | 1.324 (3) | C8—C9 | 1.485 (3) |
| N3—C7 | 1.362 (3) | C9—C10 | 1.384 (3) |
| N4—C8 | 1.311 (3) | C10—C11 | 1.385 (4) |
| N4—C7 | 1.356 (3) | C10—H10A | 0.9818 |
| N5—C13 | 1.333 (3) | C11—C12 | 1.375 (4) |
| N5—C9 | 1.348 (3) | C11—H11A | 0.9664 |
| N6—C7 | 1.321 (3) | C12—C13 | 1.381 (4) |
| N6—H6A | 0.9078 | C12—H12A | 0.9670 |
| N6—H6B | 0.9080 | C13—H13A | 0.9815 |
| N2—Cd—N1 | 68.97 (6) | C4—C3—H3A | 122.2 |
| N2—Cd—Cl1 | 141.58 (5) | C5—C4—C3 | 118.9 (2) |
| N1—Cd—Cl1 | 100.97 (5) | C5—C4—H4A | 122.6 |
| N2—Cd—N5 | 69.07 (7) | C3—C4—H4A | 118.4 |
| N1—Cd—N5 | 134.84 (7) | N1—C5—C4 | 122.3 (2) |
| Cl1—Cd—N5 | 101.44 (5) | N1—C5—C6 | 115.38 (19) |
| N2—Cd—Cl2 | 108.57 (5) | C4—C5—C6 | 122.3 (2) |
| N1—Cd—Cl2 | 109.67 (5) | N3—C6—N2 | 124.7 (2) |
| Cl1—Cd—Cl2 | 109.69 (3) | N3—C6—C5 | 120.0 (2) |
| N5—Cd—Cl2 | 98.80 (5) | N2—C6—C5 | 115.24 (19) |
| C1—N1—C5 | 117.9 (2) | N6—C7—N4 | 116.1 (2) |
| C1—N1—Cd | 124.73 (17) | N6—C7—N3 | 118.9 (2) |
| C5—N1—Cd | 117.40 (14) | N4—C7—N3 | 124.9 (2) |
| C6—N2—C8 | 116.34 (19) | N4—C8—N2 | 124.9 (2) |
| C6—N2—Cd | 122.13 (14) | N4—C8—C9 | 118.8 (2) |
| C8—N2—Cd | 121.48 (15) | N2—C8—C9 | 116.28 (19) |
| C6—N3—C7 | 114.17 (19) | N5—C9—C10 | 122.5 (2) |
| C8—N4—C7 | 114.62 (19) | N5—C9—C8 | 116.0 (2) |
| C13—N5—C9 | 117.9 (2) | C10—C9—C8 | 121.5 (2) |
| C13—N5—Cd | 125.93 (16) | C9—C10—C11 | 118.7 (2) |
| C9—N5—Cd | 115.21 (15) | C9—C10—H10A | 122.5 |
| C7—N6—H6A | 120.1 | C11—C10—H10A | 118.8 |
| C7—N6—H6B | 120.9 | C12—C11—C10 | 119.0 (2) |
| H6A—N6—H6B | 119.0 | C12—C11—H11A | 118.6 |
| N1—C1—C2 | 123.1 (2) | C10—C11—H11A | 122.4 |
| N1—C1—H1A | 115.9 | C11—C12—C13 | 118.9 (2) |
| C2—C1—H1A | 121.0 | C11—C12—H12A | 123.4 |
| C3—C2—C1 | 118.6 (2) | C13—C12—H12A | 117.7 |
| C3—C2—H2A | 123.3 | N5—C13—C12 | 123.0 (2) |
| C1—C2—H2A | 118.0 | N5—C13—H13A | 116.2 |
| C2—C3—C4 | 119.2 (2) | C12—C13—H13A | 120.8 |
| C2—C3—H3A | 118.6 | ||
| N2—Cd—N1—C1 | 174.8 (2) | C7—N3—C6—N2 | 2.9 (3) |
| Cl1—Cd—N1—C1 | 33.5 (2) | C7—N3—C6—C5 | −175.0 (2) |
| N5—Cd—N1—C1 | 152.02 (19) | C8—N2—C6—N3 | −6.0 (3) |
| Cl2—Cd—N1—C1 | −82.2 (2) | Cd—N2—C6—N3 | 171.45 (17) |
| N2—Cd—N1—C5 | −5.55 (16) | C8—N2—C6—C5 | 172.00 (19) |
| Cl1—Cd—N1—C5 | −146.86 (16) | Cd—N2—C6—C5 | −10.6 (3) |
| N5—Cd—N1—C5 | −28.3 (2) | N1—C5—C6—N3 | −177.2 (2) |
| Cl2—Cd—N1—C5 | 97.44 (16) | C4—C5—C6—N3 | 5.9 (3) |
| N1—Cd—N2—C6 | 8.74 (16) | N1—C5—C6—N2 | 4.8 (3) |
| Cl1—Cd—N2—C6 | 89.73 (18) | C4—C5—C6—N2 | −172.2 (2) |
| N5—Cd—N2—C6 | 171.65 (19) | C8—N4—C7—N6 | 177.5 (2) |
| Cl2—Cd—N2—C6 | −95.81 (17) | C8—N4—C7—N3 | −3.8 (3) |
| N1—Cd—N2—C8 | −173.96 (19) | C6—N3—C7—N6 | −179.0 (2) |
| Cl1—Cd—N2—C8 | −92.97 (18) | C6—N3—C7—N4 | 2.3 (3) |
| N5—Cd—N2—C8 | −11.05 (17) | C7—N4—C8—N2 | 0.3 (3) |
| Cl2—Cd—N2—C8 | 81.49 (17) | C7—N4—C8—C9 | 178.3 (2) |
| N2—Cd—N5—C13 | −179.5 (2) | C6—N2—C8—N4 | 4.2 (3) |
| N1—Cd—N5—C13 | −156.69 (19) | Cd—N2—C8—N4 | −173.20 (17) |
| Cl1—Cd—N5—C13 | −38.3 (2) | C6—N2—C8—C9 | −173.76 (19) |
| Cl2—Cd—N5—C13 | 73.9 (2) | Cd—N2—C8—C9 | 8.8 (3) |
| N2—Cd—N5—C9 | 12.20 (16) | C13—N5—C9—C10 | −0.6 (4) |
| N1—Cd—N5—C9 | 35.0 (2) | Cd—N5—C9—C10 | 168.70 (18) |
| Cl1—Cd—N5—C9 | 153.32 (16) | C13—N5—C9—C8 | 178.2 (2) |
| Cl2—Cd—N5—C9 | −94.40 (16) | Cd—N5—C9—C8 | −12.4 (3) |
| C5—N1—C1—C2 | 0.6 (4) | N4—C8—C9—N5 | −174.8 (2) |
| Cd—N1—C1—C2 | −179.7 (2) | N2—C8—C9—N5 | 3.3 (3) |
| N1—C1—C2—C3 | 0.1 (4) | N4—C8—C9—C10 | 4.0 (3) |
| C1—C2—C3—C4 | −0.6 (4) | N2—C8—C9—C10 | −177.8 (2) |
| C2—C3—C4—C5 | 0.4 (4) | N5—C9—C10—C11 | −0.3 (4) |
| C1—N1—C5—C4 | −0.9 (3) | C8—C9—C10—C11 | −179.1 (2) |
| Cd—N1—C5—C4 | 179.46 (18) | C9—C10—C11—C12 | 1.2 (4) |
| C1—N1—C5—C6 | −177.8 (2) | C10—C11—C12—C13 | −1.2 (4) |
| Cd—N1—C5—C6 | 2.5 (3) | C9—N5—C13—C12 | 0.6 (4) |
| C3—C4—C5—N1 | 0.3 (4) | Cd—N5—C13—C12 | −167.4 (2) |
| C3—C4—C5—C6 | 177.1 (2) | C11—C12—C13—N5 | 0.3 (4) |
| H··· | ||||
| N6—H6A···N3i | 0.91 | 2.31 | 3.183 (3) | 162 |
| N6—H6B···Cl2ii | 0.91 | 2.45 | 3.334 (2) | 165 |
| C12—H12A···Cl1iii | 0.97 | 2.76 | 3.671 (2) | 158 |
| C2—H2A···Cl1iv | 0.97 | 2.75 | 3.705 (3) | 166 |
| C11—H11A···Cl2v | 0.97 | 2.82 | 3.596 (2) | 138 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N6—H6 | 0.91 | 2.31 | 3.183 (3) | 162 |
| N6—H6 | 0.91 | 2.45 | 3.334 (2) | 165 |
| C12—H12 | 0.97 | 2.76 | 3.671 (2) | 158 |
| C2—H2 | 0.97 | 2.75 | 3.705 (3) | 166 |
| C11—H11 | 0.97 | 2.82 | 3.596 (2) | 138 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .