Literature DB >> 21754335

A dinuclear zinc complex with (E)-4-dimethyl-amino-N'-(2-hy-droxy-benzyl-idene)benzohydrazide.

Jie Ma1, Wei-Zhen Fan, Li-Rong Lin.   

Abstract

The title compound, bis-[μ-(E)-2-({2-[4-(dimethyl-amino)-benzo-yl]hydrazinyl-idene}meth-yl)phenolato]bis-[formato-zinc], [Zn(2)(C(16)H(16)N(3)O(2))(2)(CHO(2))(2)], is a dinuclear Zn(II) complex containing two Zn(II) cations, two monovalent anions of a Schiff base ligand, 4-dimethyl-amino-N'-(2-hy-droxy-benzyl-idene)benzohydrazide (L), and two formate ions. Each Zn(II) atom chelates with the hy-droxy O atom of salicyl-aldehyde, the imine N atom, the carbonyl O atom, the formate carboxyl-ate O atom and the hy-droxy O atom of the salicyl-aldehyde moiety in a symmetry-related unit. The five-coordinate Zn(II) atoms form a dimeric centrosymmetric unit with a central parallelepiped Zn(2)O(2) core and parallel faces derived from the Schiff base ligands. The crystal packing is stabilized by inter-molecular N-H⋯O hydrogen bonds between the amide N atom and the formate carboxyl-ate O atom.

Entities:  

Year:  2011        PMID: 21754335      PMCID: PMC3089200          DOI: 10.1107/S1600536811014462

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details of Zn complexes and related applications, see: Shamsipur et al. (2001 ▶); Cametti et al. (2008 ▶); Winter et al. (2009 ▶); Shi et al. (2009 ▶); Rai et al. (2009 ▶). For potential applications in luminescence materials, see: Erxleben (2001 ▶). For recent advances in biosensory and medicinal therapeutic applications of ZnII complexes, see: Drewry & Gunning (2011 ▶). For other applications of Schiff base–zinc complexes, see: Costamagna et al. (1992 ▶); Sunatsuki et al. (2002 ▶); Jiang et al. (2010 ▶); Li et al. (2010 ▶). For details of the synthesis of the Schiff base ligand, see: Pouralimardan et al. (2007 ▶). For related literature on zinc complex applications, see: Consiglio et al. (2010 ▶); Kwok et al. (2004 ▶).

Experimental

Crystal data

[Zn2(C16H16N3O2)2(CHO2)2] M = 785.41 Monoclinic, a = 14.556 (3) Å b = 6.7607 (14) Å c = 17.085 (3) Å β = 101.63 (3)° V = 1646.8 (6) Å3 Z = 2 Mo Kα radiation μ = 1.52 mm−1 T = 173 K 0.10 × 0.10 × 0.08 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.863, T max = 0.888 13433 measured reflections 3213 independent reflections 2679 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.077 S = 1.07 3213 reflections 228 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.30 e Å−3 Data collection: RAPID-AUTO (Rigaku, 2004 ▶); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SHELXS97 (Sheldrick,2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811014462/jj2088sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811014462/jj2088Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811014462/jj2088Isup3.cdx Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn2(C16H16N3O2)2(CHO2)2]F(000) = 808
Mr = 785.41Dx = 1.584 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 11481 reflections
a = 14.556 (3) Åθ = 6.1–55.0°
b = 6.7607 (14) ŵ = 1.52 mm1
c = 17.085 (3) ÅT = 173 K
β = 101.63 (3)°Block, yellow
V = 1646.8 (6) Å30.10 × 0.10 × 0.08 mm
Z = 2
Rigaku R-AXIS RAPID diffractometer3213 independent reflections
Radiation source: Rotating anode2679 reflections with I > 2σ(I)
graphiteRint = 0.032
ω scansθmax = 26.0°, θmin = 3.3°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)h = −17→17
Tmin = 0.863, Tmax = 0.888k = −8→8
13433 measured reflectionsl = −21→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.077H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0452P)2 + 0.0838P] where P = (Fo2 + 2Fc2)/3
3213 reflections(Δ/σ)max = 0.002
228 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.604524 (15)0.57545 (3)0.527904 (16)0.03564 (10)
O10.47575 (10)0.5761 (2)0.56269 (10)0.0401 (4)
N20.68239 (11)0.9705 (2)0.53175 (12)0.0381 (4)
H80.69591.09480.54440.046*
N10.60914 (11)0.8734 (2)0.55588 (11)0.0344 (4)
O20.71192 (10)0.6870 (2)0.47370 (10)0.0436 (4)
C110.90778 (14)1.2366 (3)0.44114 (14)0.0418 (5)
H110.92471.37100.45200.050*
C90.80890 (13)0.9595 (3)0.45818 (13)0.0339 (5)
C120.95679 (14)1.1247 (3)0.39372 (14)0.0378 (5)
C130.92810 (15)0.9259 (3)0.37917 (15)0.0419 (5)
H130.95910.84460.34720.050*
C80.73176 (13)0.8649 (3)0.48804 (13)0.0347 (5)
C60.48425 (14)0.8912 (3)0.62988 (14)0.0378 (5)
N31.02861 (13)1.2013 (3)0.36293 (13)0.0476 (5)
C100.83602 (14)1.1570 (3)0.47224 (14)0.0385 (5)
H100.80421.23740.50390.046*
C10.44444 (13)0.7007 (3)0.61235 (13)0.0355 (5)
C70.56179 (15)0.9695 (3)0.59851 (15)0.0414 (5)
H70.57891.10340.61060.050*
C140.85623 (15)0.8488 (3)0.41056 (15)0.0418 (5)
H140.83830.71510.39930.050*
C151.08257 (17)1.0784 (4)0.31949 (17)0.0560 (7)
H15A1.13471.15540.30680.084*
H15B1.04221.03220.26990.084*
H15C1.10740.96420.35240.084*
C161.06386 (17)1.3985 (3)0.38441 (18)0.0547 (6)
H16A1.01121.49110.37880.082*
H16B1.10581.43890.34900.082*
H16C1.09851.39870.43990.082*
C20.37002 (15)0.6489 (4)0.64826 (15)0.0461 (6)
H20.34280.52120.63870.055*
C30.33486 (16)0.7778 (4)0.69733 (16)0.0540 (6)
H30.28350.73800.72020.065*
C50.44609 (16)1.0176 (4)0.68003 (16)0.0504 (6)
H50.47231.14580.69090.060*
C40.37272 (17)0.9632 (4)0.71382 (16)0.0559 (7)
H40.34831.05120.74790.067*
O30.68177 (10)0.3641 (2)0.58935 (10)0.0429 (4)
O40.71583 (15)0.5810 (3)0.68721 (13)0.0722 (6)
C170.72061 (16)0.4179 (3)0.65971 (16)0.0455 (6)
H170.75630.32160.69330.055*
U11U22U33U12U13U23
Zn10.03384 (15)0.02593 (14)0.04950 (19)−0.00573 (9)0.01398 (11)−0.00385 (10)
O10.0353 (7)0.0404 (8)0.0478 (10)−0.0092 (6)0.0162 (7)−0.0117 (7)
N20.0372 (9)0.0266 (8)0.0540 (13)−0.0070 (7)0.0180 (9)−0.0025 (8)
N10.0336 (8)0.0281 (8)0.0432 (11)−0.0063 (7)0.0117 (8)0.0007 (7)
O20.0469 (8)0.0292 (7)0.0604 (11)−0.0115 (6)0.0246 (8)−0.0085 (7)
C110.0446 (11)0.0323 (10)0.0517 (15)−0.0104 (9)0.0171 (10)−0.0037 (10)
C90.0335 (10)0.0320 (10)0.0368 (13)−0.0043 (8)0.0084 (9)0.0010 (8)
C120.0349 (10)0.0399 (11)0.0396 (14)−0.0026 (9)0.0097 (9)0.0037 (9)
C130.0449 (11)0.0382 (11)0.0469 (15)−0.0002 (9)0.0194 (11)−0.0060 (10)
C80.0329 (9)0.0319 (10)0.0389 (13)−0.0036 (8)0.0067 (9)0.0014 (9)
C60.0371 (10)0.0364 (10)0.0416 (14)−0.0006 (9)0.0124 (9)−0.0042 (9)
N30.0465 (10)0.0476 (10)0.0548 (14)−0.0094 (9)0.0250 (10)−0.0018 (9)
C100.0410 (11)0.0333 (10)0.0443 (14)−0.0055 (9)0.0159 (10)−0.0053 (9)
C10.0315 (9)0.0402 (11)0.0347 (13)−0.0008 (9)0.0065 (9)−0.0020 (9)
C70.0427 (11)0.0305 (10)0.0536 (16)−0.0054 (9)0.0161 (11)−0.0061 (10)
C140.0459 (11)0.0307 (10)0.0511 (15)−0.0066 (9)0.0150 (11)−0.0037 (10)
C150.0486 (13)0.0675 (16)0.0584 (18)−0.0044 (12)0.0259 (13)−0.0030 (13)
C160.0475 (12)0.0561 (14)0.0650 (19)−0.0153 (11)0.0220 (12)−0.0036 (13)
C20.0411 (11)0.0556 (13)0.0436 (15)−0.0127 (10)0.0138 (10)−0.0057 (11)
C30.0392 (11)0.0807 (18)0.0466 (16)−0.0074 (12)0.0191 (11)−0.0078 (13)
C50.0490 (13)0.0467 (12)0.0576 (17)−0.0018 (11)0.0154 (12)−0.0139 (12)
C40.0472 (13)0.0709 (17)0.0537 (17)0.0033 (12)0.0196 (12)−0.0178 (13)
O30.0489 (8)0.0299 (7)0.0510 (11)−0.0020 (6)0.0125 (8)−0.0009 (7)
O40.1017 (16)0.0525 (11)0.0617 (14)−0.0037 (10)0.0148 (12)−0.0154 (9)
C170.0452 (12)0.0419 (12)0.0513 (17)−0.0026 (10)0.0144 (11)0.0063 (11)
Zn1—O31.9829 (16)C6—C71.444 (3)
Zn1—O1i2.0204 (16)N3—C151.447 (3)
Zn1—N12.0681 (17)N3—C161.449 (3)
Zn1—O12.0776 (15)C10—H100.9500
Zn1—O22.1104 (15)C1—C21.393 (3)
O1—C11.339 (2)C7—H70.9500
O1—Zn1i2.0204 (16)C14—H140.9500
N2—C81.342 (3)C15—H15A0.9800
N2—N11.384 (2)C15—H15B0.9800
N2—H80.8800C15—H15C0.9800
N1—C71.277 (3)C16—H16A0.9800
O2—C81.250 (2)C16—H16B0.9800
C11—C101.374 (3)C16—H16C0.9800
C11—C121.404 (3)C2—C31.378 (3)
C11—H110.9500C2—H20.9500
C9—C141.387 (3)C3—C41.375 (4)
C9—C101.399 (3)C3—H30.9500
C9—C81.470 (3)C5—C41.363 (3)
C12—N31.364 (3)C5—H50.9500
C12—C131.415 (3)C4—H40.9500
C13—C141.371 (3)O3—C171.274 (3)
C13—H130.9500O4—C171.206 (3)
C6—C51.402 (3)C17—H170.9500
C6—C11.419 (3)
O3—Zn1—O1i102.64 (7)C11—C10—C9121.2 (2)
O3—Zn1—N1126.22 (7)C11—C10—H10119.4
O1i—Zn1—N1131.13 (7)C9—C10—H10119.4
O3—Zn1—O1107.34 (6)O1—C1—C2120.97 (18)
O1i—Zn1—O178.72 (7)O1—C1—C6121.88 (18)
N1—Zn1—O185.47 (6)C2—C1—C6117.1 (2)
O3—Zn1—O295.66 (6)N1—C7—C6125.24 (19)
O1i—Zn1—O2102.13 (6)N1—C7—H7117.4
N1—Zn1—O276.17 (6)C6—C7—H7117.4
O1—Zn1—O2156.30 (6)C13—C14—C9122.20 (19)
C1—O1—Zn1i125.90 (12)C13—C14—H14118.9
C1—O1—Zn1128.65 (12)C9—C14—H14118.9
Zn1i—O1—Zn1101.28 (7)N3—C15—H15A109.5
C8—N2—N1116.42 (16)N3—C15—H15B109.5
C8—N2—H8121.8H15A—C15—H15B109.5
N1—N2—H8121.8N3—C15—H15C109.5
C7—N1—N2117.73 (17)H15A—C15—H15C109.5
C7—N1—Zn1129.16 (14)H15B—C15—H15C109.5
N2—N1—Zn1112.60 (12)N3—C16—H16A109.5
C8—O2—Zn1114.85 (13)N3—C16—H16B109.5
C10—C11—C12121.76 (19)H16A—C16—H16B109.5
C10—C11—H11119.1N3—C16—H16C109.5
C12—C11—H11119.1H16A—C16—H16C109.5
C14—C9—C10117.34 (18)H16B—C16—H16C109.5
C14—C9—C8118.27 (18)C3—C2—C1121.7 (2)
C10—C9—C8124.35 (19)C3—C2—H2119.1
N3—C12—C11122.44 (19)C1—C2—H2119.1
N3—C12—C13121.0 (2)C4—C3—C2121.3 (2)
C11—C12—C13116.57 (18)C4—C3—H3119.4
C14—C13—C12120.9 (2)C2—C3—H3119.4
C14—C13—H13119.5C4—C5—C6122.4 (2)
C12—C13—H13119.5C4—C5—H5118.8
O2—C8—N2119.51 (18)C6—C5—H5118.8
O2—C8—C9120.87 (19)C5—C4—C3118.3 (2)
N2—C8—C9119.62 (17)C5—C4—H4120.8
C5—C6—C1119.1 (2)C3—C4—H4120.8
C5—C6—C7116.03 (19)C17—O3—Zn1112.98 (14)
C1—C6—C7124.82 (19)O4—C17—O3125.4 (2)
C12—N3—C15121.18 (19)O4—C17—H17117.3
C12—N3—C16120.76 (19)O3—C17—H17117.3
C15—N3—C16117.20 (18)
D—H···AD—HH···AD···AD—H···A
N2—H8···O3ii0.882.002.838 (2)158.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H8⋯O3i0.882.002.838 (2)158

Symmetry code: (i) .

  7 in total

1.  Supramolecular aggregation/deaggregation in amphiphilic dipolar Schiff-base zinc(II) complexes.

Authors:  Giuseppe Consiglio; Salvatore Failla; Paolo Finocchiaro; Ivan Pietro Oliveri; Roberto Purrello; Santo Di Bella
Journal:  Inorg Chem       Date:  2010-06-07       Impact factor: 5.165

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  A Schiff base complex of Zn(II) as a neutral carrier for highly selective PVC membrane sensors for the sulfate ion.

Authors:  M Shamsipur; M Yousefi; M Hosseini; M R Ganjali; H Sharghi; H Naeimi
Journal:  Anal Chem       Date:  2001-07-01       Impact factor: 6.986

4.  Self-assembled zinc(II) Schiff base polymers for applications in polymer light-emitting devices.

Authors:  Chi-Chung Kwok; Sze-Chit Yu; Iona H T Sham; Chi-Ming Che
Journal:  Chem Commun (Camb)       Date:  2004-10-20       Impact factor: 6.222

5.  Dinuclear cadmium(II), zinc(II), and manganese(II), trinuclear nickel(II), and pentanuclear copper(II) complexes with novel macrocyclic and acyclic Schiff-base ligands having enantiopure or racemic camphoric diamine components.

Authors:  Jue-Chao Jiang; Zhao-Lian Chu; Wei Huang; Gang Wang; Xiao-Zeng You
Journal:  Inorg Chem       Date:  2010-07-05       Impact factor: 5.165

6.  Construction of a novel Zn-Ni trinuclear Schiff base and a Ni2+ chemosensor.

Authors:  Guo-Bi Li; Hua-Cai Fang; Yue-Peng Cai; Zheng-Yuan Zhou; Praveen K Thallapally; Jian Tian
Journal:  Inorg Chem       Date:  2010-08-16       Impact factor: 5.165

7.  Mono- and dinuclear zinc complexes derived from unsymmetric binucleating ligands: synthesis, characterization, and formation of tetranuclear arrays.

Authors:  A Erxleben
Journal:  Inorg Chem       Date:  2001-01-15       Impact factor: 5.165

  7 in total
  2 in total

1.  Co(II) and Cd(II) complexes derived from heterocyclic Schiff-Bases: synthesis, structural characterisation, and biological activity.

Authors:  Riyadh M Ahmed; Enaam I Yousif; Mohamad J Al-Jeboori
Journal:  ScientificWorldJournal       Date:  2013-08-21

2.  Dichlorido{(E)-4-dimethyl-amino-N'-[(pyri-din-2-yl)methyl-idene-κN]benzo-hydrazide-κO}zinc.

Authors:  Manuel N Chaur
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-12-08
  2 in total

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