Literature DB >> 21754317

catena-Poly[[aqua-(benzoato-κO,O')(benzoic acid-κO)calcium]-μ(3)-benzoato-κO:O,O':O'].

Olimjon Azizov, Zukhra Kadirova, Tohir Azizov, Samat Tolipov, Bakhtiyar Ibragimov.   

Abstract

In title compound, [Ca(C(7)H(5)O(2))(2)(C(7)H(6)O(2))(H(2)O)](n), the eightfold-coordinated Ca(II) ion is bonded to four carboxyl-ate O atoms from two benzoate ions, an O atom from benzoic acid and a water O atom. One of the carboxyl-ate groups bridges adjacent Ca(2+) ions, forming a polymeric ribbon structure parallel to [010]. In the crystal, the benzoate anions and water mol-ecule inter-act by way of inter- and intra-molecular O-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 21754317      PMCID: PMC3089294          DOI: 10.1107/S1600536811013493

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the crystal structures and physical stability of calcium benzoate hydrates, mesophases and related compounds, see: Cherkezova et al. (1987 ▶); Zhang et al. (1999 ▶); Yano et al. (2001 ▶); Senkovska & Thewalt (2005 ▶); Terakita & Byrn (2006 ▶).

Experimental

Crystal data

[Ca(C7H5O2)2(C7H6O2)(H2O)] M = 422.43 Monoclinic, a = 15.5535 (3) Å b = 6.61183 (16) Å c = 20.1828 (4) Å β = 94.3750 (18)° V = 2069.49 (8) Å3 Z = 4 Cu Kα radiation μ = 2.96 mm−1 T = 293 K 0.55 × 0.45 × 0.40 mm

Data collection

Oxford Diffraction Xcalibur Ruby diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2007 ▶) T min = 0.782, T max = 1.000 7257 measured reflections 3847 independent reflections 2961 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.121 S = 1.07 3847 reflections 275 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.27 e Å−3 Δρmin = −0.26 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2007 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811013493/bv2180sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811013493/bv2180Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ca(C7H5O2)2(C7H6O2)(H2O)]F(000) = 880
Mr = 422.43Dx = 1.356 Mg m3
Monoclinic, P21/nCu Kα radiation, λ = 1.54184 Å
Hall symbol: -P 2ynCell parameters from 3133 reflections
a = 15.5535 (3) Åθ = 3.5–70.6°
b = 6.61183 (16) ŵ = 2.96 mm1
c = 20.1828 (4) ÅT = 293 K
β = 94.3750 (18)°Monoclinic, colourless
V = 2069.49 (8) Å30.55 × 0.45 × 0.40 mm
Z = 4
Oxford Diffraction Xcalibur Ruby diffractometer3847 independent reflections
Radiation source: Enhance (Cu) X-ray Source2961 reflections with I > 2σ(I)
graphiteRint = 0.025
Detector resolution: 10.2576 pixels mm-1θmax = 71.1°, θmin = 3.5°
q/2θ scansh = −17→18
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2007)k = −7→7
Tmin = 0.782, Tmax = 1.000l = −22→24
7257 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.041H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.121w = 1/[σ2(Fo2) + (0.0754P)2] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max < 0.001
3847 reflectionsΔρmax = 0.27 e Å3
275 parametersΔρmin = −0.26 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0050 (4)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ca10.45197 (2)0.25532 (5)0.033347 (19)0.03194 (16)
O1W0.39727 (11)0.2332 (3)−0.08057 (9)0.0443 (4)
O10.36276 (12)0.5693 (3)0.16770 (10)0.0675 (6)
O20.33262 (10)0.2999 (3)0.10426 (9)0.0508 (4)
O30.59059 (9)0.0795 (2)−0.02003 (7)0.0394 (3)
O40.58487 (8)0.4064 (2)−0.00286 (7)0.0368 (3)
O50.54914 (11)0.1360 (2)0.12874 (8)0.0528 (4)
O60.51357 (9)0.4557 (2)0.13481 (7)0.0430 (4)
C10.1629 (2)0.2997 (6)0.14566 (18)0.0862 (11)
H1A0.18150.18220.12580.103*
C20.0778 (2)0.3155 (8)0.1610 (2)0.1124 (15)
H2A0.03960.20890.15220.135*
C30.0512 (3)0.4885 (8)0.1889 (2)0.1325 (19)
H3A−0.00590.50060.19900.159*
C40.1074 (3)0.6473 (9)0.2026 (3)0.1310 (18)
H4A0.08810.76540.22160.157*
C50.1927 (2)0.6303 (6)0.18807 (18)0.0944 (12)
H5A0.23120.73580.19750.113*
C60.21971 (16)0.4540 (4)0.15927 (12)0.0590 (7)
C70.31009 (15)0.4324 (4)0.14106 (12)0.0499 (6)
C80.76481 (14)0.4308 (4)0.02152 (12)0.0492 (6)
H8A0.73230.53910.03510.059*
C90.85412 (16)0.4419 (5)0.02713 (15)0.0660 (8)
H9A0.88130.55790.04440.079*
C100.90217 (16)0.2842 (5)0.00760 (17)0.0744 (9)
H10A0.9620.29310.01100.089*
C110.86257 (17)0.1122 (5)−0.01702 (18)0.0801 (10)
H11A0.89570.0043−0.03010.096*
C120.77321 (15)0.0979 (4)−0.02254 (14)0.0590 (7)
H12A0.7466−0.0201−0.03860.071*
C130.72419 (13)0.2590 (3)−0.00417 (11)0.0378 (5)
C140.62723 (12)0.2463 (3)−0.01012 (9)0.0306 (4)
C150.59799 (16)0.4938 (4)0.26173 (12)0.0542 (6)
H15A0.56360.60060.24550.065*
C160.64396 (19)0.5095 (5)0.32353 (14)0.0721 (8)
H16A0.63950.6260.34890.087*
C170.69539 (17)0.3548 (6)0.34678 (14)0.0765 (9)
H17A0.72620.36630.38790.092*
C180.70210 (18)0.1819 (6)0.31004 (15)0.0743 (9)
H18A0.73770.07710.32610.089*
C190.65589 (15)0.1632 (5)0.24906 (12)0.0553 (6)
H19A0.66000.04530.22440.066*
C200.60356 (13)0.3198 (4)0.22475 (10)0.0401 (5)
C210.55280 (13)0.3005 (3)0.15892 (10)0.0379 (5)
H1W10.4060 (18)0.139 (5)−0.1002 (14)0.062 (10)*
H2W10.4184 (19)0.325 (5)−0.1072 (15)0.074 (10)*
H1O0.420 (2)0.543 (5)0.1603 (16)0.090 (10)*
U11U22U33U12U13U23
Ca10.0308 (2)0.0223 (2)0.0429 (2)−0.00138 (15)0.00329 (15)−0.00246 (16)
O1W0.0509 (9)0.0296 (9)0.0512 (9)0.0004 (7)−0.0051 (7)−0.0028 (8)
O10.0524 (11)0.0671 (13)0.0837 (13)0.0043 (9)0.0102 (9)−0.0329 (11)
O20.0478 (9)0.0470 (10)0.0600 (10)−0.0015 (7)0.0187 (7)−0.0103 (8)
O30.0376 (7)0.0237 (8)0.0574 (9)−0.0041 (6)0.0064 (6)−0.0038 (6)
O40.0330 (7)0.0254 (7)0.0518 (8)0.0025 (6)0.0030 (6)−0.0031 (6)
O50.0690 (10)0.0360 (9)0.0523 (9)0.0049 (8)−0.0028 (8)−0.0066 (8)
O60.0437 (8)0.0357 (9)0.0490 (8)0.0028 (6)−0.0005 (6)0.0012 (7)
C10.0648 (19)0.103 (2)0.096 (2)−0.0124 (18)0.0364 (17)−0.032 (2)
C20.065 (2)0.153 (4)0.124 (3)−0.024 (2)0.044 (2)−0.046 (3)
C30.062 (2)0.193 (5)0.148 (4)0.011 (3)0.043 (2)−0.056 (4)
C40.079 (3)0.162 (4)0.157 (4)0.029 (3)0.039 (3)−0.064 (4)
C50.074 (2)0.105 (3)0.107 (3)0.015 (2)0.0255 (18)−0.039 (2)
C60.0508 (14)0.0750 (19)0.0526 (13)0.0080 (13)0.0136 (11)−0.0091 (13)
C70.0498 (13)0.0520 (15)0.0491 (13)0.0048 (11)0.0109 (10)−0.0039 (12)
C80.0369 (11)0.0421 (14)0.0681 (15)−0.0041 (10)0.0007 (10)−0.0077 (12)
C90.0414 (13)0.0679 (19)0.0874 (19)−0.0160 (13)−0.0035 (12)−0.0104 (16)
C100.0273 (11)0.094 (2)0.102 (2)−0.0010 (14)0.0051 (13)−0.0049 (19)
C110.0390 (13)0.083 (2)0.119 (3)0.0131 (15)0.0089 (14)−0.023 (2)
C120.0383 (12)0.0518 (15)0.0873 (19)0.0051 (11)0.0074 (11)−0.0166 (14)
C130.0307 (10)0.0364 (12)0.0462 (11)−0.0009 (8)0.0028 (8)0.0014 (9)
C140.0296 (9)0.0256 (10)0.0368 (10)−0.0008 (8)0.0045 (7)0.0006 (8)
C150.0518 (13)0.0597 (16)0.0507 (13)0.0025 (12)0.0003 (10)−0.0096 (12)
C160.0679 (17)0.089 (2)0.0579 (15)−0.0055 (16)−0.0038 (13)−0.0217 (16)
C170.0522 (15)0.126 (3)0.0501 (15)0.0002 (18)−0.0076 (12)0.0002 (18)
C180.0553 (16)0.106 (2)0.0605 (16)0.0200 (17)−0.0007 (13)0.0175 (18)
C190.0498 (13)0.0640 (17)0.0524 (13)0.0115 (12)0.0053 (11)0.0037 (13)
C200.0339 (10)0.0482 (13)0.0388 (11)−0.0014 (9)0.0059 (8)0.0021 (10)
C210.0338 (10)0.0386 (12)0.0415 (11)−0.0004 (9)0.0053 (8)0.0002 (9)
O4—Ca12.4566 (13)C4—C51.385 (5)
Ca1—O3i2.3204 (14)C4—H4A0.9300
Ca1—O4ii2.3781 (14)C5—C61.382 (4)
Ca1—O1W2.3943 (17)C5—H5A0.9300
Ca1—O22.4467 (15)C6—C71.487 (3)
Ca1—O52.4837 (17)C8—C131.382 (3)
Ca1—O62.5628 (15)C8—C91.387 (3)
Ca1—O32.7414 (14)C8—H8A0.9300
Ca1—C212.892 (2)C9—C101.359 (4)
Ca1—C142.9272 (18)C9—H9A0.9300
O1W—Ca12.3944 (17)C10—C111.369 (4)
O1W—H1W10.75 (3)C10—H10A0.9300
O1W—H2W10.89 (3)C11—C121.389 (4)
O1—C71.309 (3)C11—H11A0.9300
O1—H1O0.92 (4)C12—C131.377 (3)
O2—C71.217 (3)C12—H12A0.9300
O3—C141.250 (2)C13—C141.506 (3)
O3—Ca12.7414 (14)C14—Ca12.9273 (18)
O4—C141.261 (2)C15—C201.378 (3)
O4—Ca12.4567 (13)C15—C161.394 (3)
O5—C211.245 (3)C15—H15A0.9300
O5—Ca12.4838 (17)C16—C171.360 (4)
O6—C211.272 (2)C16—H16A0.9300
O6—Ca12.5628 (15)C17—C181.371 (5)
C1—C61.364 (4)C17—H17A0.9300
C1—C21.386 (4)C18—C191.383 (4)
C1—H1A0.9300C18—H18A0.9300
C2—C31.354 (6)C19—C201.384 (3)
C2—H2A0.9300C19—H19A0.9300
C3—C41.381 (6)C20—C211.498 (3)
C3—H3A0.9300C21—Ca12.892 (2)
O1W—Ca1—O2109.84 (6)C5—C6—C7120.6 (2)
O1W—Ca1—O380.16 (5)C1—C6—C7119.3 (3)
O1W—Ca1—O489.11 (5)C1—C6—C5120.2 (3)
O1W—Ca1—O5151.11 (6)O1—C7—C6114.0 (2)
O1W—Ca1—O6151.97 (6)O2—C7—C6122.8 (2)
O2—Ca1—O3159.31 (6)O1—C7—O2123.3 (2)
O2—Ca1—O4144.90 (6)C9—C8—C13120.0 (2)
O2—Ca1—O591.65 (6)C8—C9—C10120.4 (3)
O2—Ca1—O674.00 (5)C9—C10—C11120.1 (2)
O3—Ca1—O449.51 (4)C10—C11—C12120.4 (3)
O3—Ca1—O573.72 (5)C3—C4—H4A120.00
O3—Ca1—O6106.02 (4)C5—C4—H4A120.00
O4—Ca1—O583.32 (5)C4—C5—H5A121.00
O4—Ca1—O675.86 (5)C6—C5—H5A120.00
O5—Ca1—O651.43 (4)C9—C8—H8A120.00
C11—C12—C13119.8 (2)C13—C8—H8A120.00
C8—C13—C12119.4 (2)C8—C9—H9A120.00
C8—C13—C14120.15 (18)C10—C9—H9A120.00
C12—C13—C14120.46 (19)C9—C10—H10A120.00
O4—C14—C13118.21 (17)C11—C10—H10A120.00
O3—C14—O4121.54 (17)C10—C11—H11A120.00
O3—C14—C13120.22 (17)C12—C11—H11A120.00
C16—C15—C20119.9 (2)C11—C12—H12A120.00
C15—C16—C17120.1 (3)C13—C12—H12A120.00
C16—C17—C18120.5 (3)C16—C15—H15A120.00
C17—C18—C19120.0 (3)C20—C15—H15A120.00
C18—C19—C20120.0 (3)C15—C16—H16A120.00
C15—C20—C19119.5 (2)C17—C16—H16A120.00
C15—C20—C21120.1 (2)C16—C17—H17A120.00
C19—C20—C21120.4 (2)C18—C17—H17A120.00
O5—C21—C20120.62 (19)C17—C18—H18A120.00
O6—C21—C20118.40 (18)C19—C18—H18A120.00
O5—C21—O6120.98 (19)C18—C19—H19A120.00
C2—C1—H1A120.00C20—C19—H19A120.00
C6—C1—H1A120.00Ca1—O4—C1498.75 (11)
C1—C2—H2A120.00O1W—Ca1—O3i75.71 (6)
C3—C2—H2A121.00O1W—Ca1—O4ii75.41 (6)
C2—C3—H3A119.00O2—Ca1—O3i87.72 (6)
C4—C3—H3A119.00O2—Ca1—O4ii81.92 (6)
Ca1—O2—C7135.25 (16)O3—Ca1—O3i77.05 (5)
Ca1—O3—C1485.74 (11)O3—Ca1—O4ii118.58 (4)
Ca1—O5—C2195.98 (12)O3i—Ca1—O4126.34 (5)
Ca1—O6—C2191.59 (11)O4—Ca1—O4ii74.47 (4)
C7—O1—H1O112 (2)O3i—Ca1—O586.45 (5)
Ca1—O1W—H1W1119 (2)O4ii—Ca1—O5128.29 (5)
Ca1—O1W—H2W1115 (2)O3i—Ca1—O6132.20 (5)
H1W1—O1W—H2W199 (3)O4ii—Ca1—O677.79 (5)
C2—C1—C6120.9 (4)O3i—Ca1—O4ii143.74 (5)
C1—C2—C3119.0 (4)Ca1—O3—Ca1i102.95 (5)
C2—C3—C4121.1 (4)Ca1i—O3—C14169.26 (13)
C3—C4—C5119.9 (5)Ca1—O4—Ca1ii105.53 (5)
C4—C5—C6119.0 (4)Ca1ii—O4—C14151.28 (12)
D—H···AD—HH···AD···AD—H···A
O1W—H1W1···O5i0.76 (3)2.05 (3)2.779 (2)163 (3)
O1—H1O···O60.93 (3)1.68 (3)2.597 (2)167 (3)
O1W—H2W1···O6ii0.89 (3)1.90 (3)2.754 (2)159 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1W1⋯O5i0.76 (3)2.05 (3)2.779 (2)163 (3)
O1—H1O⋯O60.93 (3)1.68 (3)2.597 (2)167 (3)
O1W—H2W1⋯O6ii0.89 (3)1.90 (3)2.754 (2)159 (3)

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Triaquabenzoatocalcium(II) monobenzoate: coordination polymer chains linked into a two-dimensional framework by hydrogen bonds.

Authors:  Irena Senkovska; Ulf Thewalt
Journal:  Acta Crystallogr C       Date:  2005-09-17       Impact factor: 1.172

3.  Structure and physical stability of hydrates and thermotropic mesophase of calcium benzoate.

Authors:  Akira Terakita; Stephen R Byrn
Journal:  J Pharm Sci       Date:  2006-05       Impact factor: 3.534

  3 in total
  1 in total

1.  Crystal structure of catena-poly[calcium-di-μ3-benzoato-κ(6) O,O':O-μ2-(dimethyl sulfoxide)-κ(2) O:O].

Authors:  Anna S Voronova; Svitlana R Petrusenko; Evgeny Goreshnik
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-07-08
  1 in total

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