Literature DB >> 21754307

Diaqua-bis-(4-carb-oxy-2-ethyl-1H-imidazole-5-carboxyl-ato-κN,O)zinc N,N-dimethyl-formamide disolvate.

Cheng-Jun Hao1, Hui Xie.   

Abstract

In the title compound, [Zn(C(7)H(7)N(2)O(4))(2)(H(2)O)(2)]·2C(3)H(7)NO, the Zn(II) ion, which lies on a center of inversion, is coordinated by two O atoms and two N atoms from two 4-carboxy-2-ethyl-1H-imid-azole-5-carboxyl-ato anions and two water O atoms in an octa-hedral environment, Each 4-carboxy-2-ethyl-1H-imid-azole-5-carboxyl-ato ligand adopts a bidentate chelating mode to the Zn(II) ion, forming two five-membered metalla rings. In the crystal, a two-dimensional framework parallel to (010) is formed by N-H⋯O and O-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 21754307      PMCID: PMC3089267          DOI: 10.1107/S1600536811012992

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the properties of complexes derived from imidazole-4,5-dicarboxylic acid, see: Maji et al. (2005 ▶); Yang & Zhang (2006 ▶). For our previous work based on 2-ethyl-4,5-imidazole­dicarboxyl­ate, see: Tian et al. (2010 ▶).

Experimental

Crystal data

[Zn(C7H7N2O4)2(H2O)2]·2C3H7NO M = 613.89 Monoclinic, a = 7.2817 (8) Å b = 20.660 (2) Å c = 9.3623 (9) Å β = 111.846 (7)° V = 1307.3 (2) Å3 Z = 2 Mo Kα radiation μ = 1.01 mm−1 T = 296 K 0.53 × 0.41 × 0.31 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.616, T max = 0.744 10742 measured reflections 2619 independent reflections 2083 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.086 S = 1.02 2619 reflections 181 parameters 3 restraints H-atom parameters constrained Δρmax = 0.22 e Å−3 Δρmin = −0.36 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811012992/nk2096sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811012992/nk2096Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C7H7N2O4)2(H2O)2]·2C3H7NOF(000) = 640
Mr = 613.89Dx = 1.560 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5837 reflections
a = 7.2817 (8) Åθ = 2.8–27.9°
b = 20.660 (2) ŵ = 1.01 mm1
c = 9.3623 (9) ÅT = 296 K
β = 111.846 (7)°Block, colourless
V = 1307.3 (2) Å30.53 × 0.41 × 0.31 mm
Z = 2
Bruker APEXII area-detector diffractometer2619 independent reflections
Radiation source: fine-focus sealed tube2083 reflections with I > 2σ(I)
graphiteRint = 0.037
φ and ω scanθmax = 26.2°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −9→8
Tmin = 0.616, Tmax = 0.744k = −25→25
10742 measured reflectionsl = −11→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.086H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0387P)2 + 0.6624P] where P = (Fo2 + 2Fc2)/3
2619 reflections(Δ/σ)max < 0.001
181 parametersΔρmax = 0.22 e Å3
3 restraintsΔρmin = −0.36 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn11.00000.00001.00000.02973 (13)
O10.6355 (3)−0.00930 (9)0.25342 (18)0.0414 (4)
O1W1.2808 (2)0.03585 (9)1.00911 (17)0.0383 (4)
H1W1.29820.02550.92720.057*
H2W1.37290.01971.08630.057*
O20.7948 (3)−0.09580 (9)0.38356 (18)0.0424 (4)
O30.9815 (3)−0.12960 (8)0.65214 (18)0.0392 (4)
H30.9214−0.11760.55950.047*
O41.0464 (2)−0.08767 (8)0.88405 (17)0.0358 (4)
N10.8675 (3)0.02603 (9)0.77101 (19)0.0263 (4)
N20.7049 (3)0.05738 (9)0.5331 (2)0.0287 (4)
H20.63730.08140.45650.034*
C10.7687 (3)0.07446 (11)0.6824 (2)0.0280 (5)
C20.8660 (3)−0.02367 (11)0.6730 (2)0.0247 (4)
C30.7660 (3)−0.00476 (11)0.5237 (2)0.0274 (5)
C40.9705 (3)−0.08386 (11)0.7418 (2)0.0292 (5)
C50.7267 (3)−0.03848 (12)0.3751 (2)0.0326 (5)
C60.7387 (4)0.14021 (12)0.7351 (3)0.0407 (6)
H6A0.78230.14030.84640.049*
H6B0.59860.15040.69340.049*
C70.8514 (5)0.19225 (14)0.6854 (4)0.0594 (8)
H7A0.98950.18150.72300.089*
H7B0.83420.23330.72690.089*
H7C0.80130.19470.57510.089*
O50.4712 (3)0.14244 (10)0.32830 (19)0.0504 (5)
N30.4143 (3)0.18961 (10)0.0978 (2)0.0412 (5)
C80.5131 (4)0.15203 (13)0.2144 (3)0.0428 (6)
H8A0.62390.13090.21040.051*
C90.4683 (6)0.1927 (2)−0.0361 (4)0.0754 (10)
H9A0.59860.1751−0.01090.113*
H9B0.46650.2369−0.06790.113*
H9C0.37550.1680−0.11820.113*
C100.2338 (5)0.22132 (16)0.0909 (4)0.0654 (9)
H10A0.22200.21840.18950.098*
H10B0.12230.20050.01470.098*
H10C0.23740.26600.06400.098*
U11U22U33U12U13U23
Zn10.0328 (2)0.0381 (2)0.01527 (18)0.00315 (17)0.00554 (15)0.00143 (15)
O10.0407 (10)0.0605 (12)0.0179 (8)0.0054 (8)0.0051 (8)0.0017 (8)
O1W0.0322 (9)0.0579 (12)0.0227 (8)−0.0008 (8)0.0078 (7)0.0013 (8)
O20.0510 (11)0.0429 (11)0.0271 (9)0.0046 (9)0.0075 (8)−0.0077 (7)
O30.0489 (10)0.0363 (9)0.0271 (9)0.0113 (8)0.0079 (8)−0.0007 (7)
O40.0433 (10)0.0374 (9)0.0211 (8)0.0090 (8)0.0055 (7)0.0040 (7)
N10.0285 (10)0.0322 (10)0.0167 (9)0.0036 (8)0.0065 (8)0.0015 (7)
N20.0295 (10)0.0336 (11)0.0196 (9)0.0060 (8)0.0053 (8)0.0066 (8)
C10.0283 (12)0.0331 (12)0.0218 (11)0.0025 (9)0.0082 (10)0.0026 (9)
C20.0250 (11)0.0297 (11)0.0183 (10)0.0009 (9)0.0068 (9)0.0007 (8)
C30.0251 (11)0.0359 (12)0.0204 (10)−0.0016 (10)0.0075 (9)0.0005 (9)
C40.0292 (12)0.0323 (12)0.0252 (12)0.0008 (10)0.0092 (10)−0.0001 (9)
C50.0278 (12)0.0450 (15)0.0230 (12)−0.0046 (11)0.0072 (10)−0.0024 (10)
C60.0472 (15)0.0407 (15)0.0313 (13)0.0133 (12)0.0114 (12)−0.0014 (11)
C70.067 (2)0.0383 (16)0.064 (2)−0.0033 (15)0.0142 (17)−0.0061 (14)
O50.0557 (12)0.0593 (13)0.0310 (10)0.0156 (10)0.0101 (9)0.0128 (8)
N30.0462 (12)0.0405 (12)0.0304 (11)0.0003 (10)0.0069 (10)0.0045 (9)
C80.0419 (15)0.0422 (15)0.0390 (15)0.0083 (12)0.0090 (12)0.0028 (12)
C90.091 (3)0.095 (3)0.0440 (18)−0.008 (2)0.0296 (19)0.0128 (17)
C100.066 (2)0.062 (2)0.0517 (18)0.0231 (17)0.0028 (16)0.0102 (15)
Zn1—N12.0680 (17)C2—C41.475 (3)
Zn1—N1i2.0680 (17)C3—C51.485 (3)
Zn1—O1Wi2.1464 (16)C6—C71.526 (4)
Zn1—O1W2.1464 (16)C6—H6A0.9700
Zn1—O42.2013 (16)C6—H6B0.9700
Zn1—O4i2.2013 (16)C7—H7A0.9600
O1—C51.241 (3)C7—H7B0.9600
O1W—H1W0.8501C7—H7C0.9600
O1W—H2W0.8500O5—C81.230 (3)
O2—C51.275 (3)N3—C81.314 (3)
O3—C41.286 (3)N3—C101.448 (4)
O3—H30.8500N3—C91.448 (3)
O4—C41.240 (3)C8—H8A0.9300
N1—C11.328 (3)C9—H9A0.9600
N1—C21.375 (3)C9—H9B0.9600
N2—C11.346 (3)C9—H9C0.9600
N2—C31.372 (3)C10—H10A0.9600
N2—H20.8600C10—H10B0.9600
C1—C61.489 (3)C10—H10C0.9600
C2—C31.371 (3)
N1—Zn1—N1i180.0O4—C4—C2118.3 (2)
N1—Zn1—O1Wi88.77 (7)O3—C4—C2118.78 (19)
N1i—Zn1—O1Wi91.23 (6)O1—C5—O2124.8 (2)
N1—Zn1—O1W91.23 (6)O1—C5—C3118.9 (2)
N1i—Zn1—O1W88.77 (7)O2—C5—C3116.3 (2)
O1Wi—Zn1—O1W180.0C1—C6—C7112.3 (2)
N1—Zn1—O478.50 (6)C1—C6—H6A109.1
N1i—Zn1—O4101.50 (6)C7—C6—H6A109.1
O1Wi—Zn1—O490.87 (6)C1—C6—H6B109.1
O1W—Zn1—O489.13 (6)C7—C6—H6B109.1
N1—Zn1—O4i101.50 (6)H6A—C6—H6B107.9
N1i—Zn1—O4i78.50 (6)C6—C7—H7A109.5
O1Wi—Zn1—O4i89.13 (6)C6—C7—H7B109.5
O1W—Zn1—O4i90.87 (6)H7A—C7—H7B109.5
O4—Zn1—O4i180.000 (1)C6—C7—H7C109.5
Zn1—O1W—H1W109.7H7A—C7—H7C109.5
Zn1—O1W—H2W109.7H7B—C7—H7C109.5
H1W—O1W—H2W109.5C8—N3—C10120.8 (2)
C4—O3—H3108.6C8—N3—C9120.2 (3)
C4—O4—Zn1112.88 (14)C10—N3—C9118.4 (2)
C1—N1—C2106.13 (17)O5—C8—N3125.4 (2)
C1—N1—Zn1141.17 (15)O5—C8—H8A117.3
C2—N1—Zn1112.51 (14)N3—C8—H8A117.3
C1—N2—C3108.49 (18)N3—C9—H9A109.5
C1—N2—H2125.8N3—C9—H9B109.5
C3—N2—H2125.8H9A—C9—H9B109.5
N1—C1—N2110.41 (19)N3—C9—H9C109.5
N1—C1—C6126.4 (2)H9A—C9—H9C109.5
N2—C1—C6123.2 (2)H9B—C9—H9C109.5
C3—C2—N1109.71 (19)N3—C10—H10A109.5
C3—C2—C4132.7 (2)N3—C10—H10B109.5
N1—C2—C4117.60 (18)H10A—C10—H10B109.5
C2—C3—N2105.25 (18)N3—C10—H10C109.5
C2—C3—C5131.7 (2)H10A—C10—H10C109.5
N2—C3—C5123.0 (2)H10B—C10—H10C109.5
O4—C4—O3122.9 (2)
D—H···AD—HH···AD···AD—H···A
O1W—H1W···O1ii0.851.952.798 (2)173
O1W—H2W···O1iii0.852.062.894 (2)168
O3—H3···O20.851.622.473 (2)177
N2—H2···O50.861.852.689 (2)166
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1W⋯O1i0.851.952.798 (2)173
O1W—H2W⋯O1ii0.852.062.894 (2)168
O3—H3⋯O20.851.622.473 (2)177
N2—H2⋯O50.861.852.689 (2)166

Symmetry codes: (i) ; (ii) .

  3 in total

1.  Porous lanthanide-organic framework with zeolite-like topology.

Authors:  Tapas Kumar Maji; Golam Mostafa; Ho-Chol Chang; Susumu Kitagawa
Journal:  Chem Commun (Camb)       Date:  2005-03-24       Impact factor: 6.222

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Diversity of coordination architecture of metal 4,5-dicarboxyimidazole.

Authors:  Rui-Qin Fang; Xian-Ming Zhang
Journal:  Inorg Chem       Date:  2006-06-12       Impact factor: 5.165

  3 in total

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