Literature DB >> 21754223

(Z)-1-(3-Mesityl-3-methyl-cyclo-but-yl)-2-(morpholin-4-yl)ethanone oxime.

Fatih Sen, Muharrem Dinçer, Alaaddin Cukurovalı, Ibrahim Yılmaz.   

Abstract

In the title compound, C(20)H(30)N(2)O(2), the cyclo-butane ring is puckered, with a dihedral angle of 19.60 (13)° between the two planes. In the crystal, the mol-ecules are linked by inter-molecular O-H⋯N and weak C-H⋯O hydrogen bonds, as well as a C-H⋯π hydrogen-bonding association.

Entities:  

Year:  2011        PMID: 21754223      PMCID: PMC3099942          DOI: 10.1107/S1600536811009408

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of related compounds, see: Dehmlow & Schmidt (1990 ▶); Coghi et al. (1976 ▶); Mixich & Thiele (1979 ▶); Migrdichian (1957 ▶); Mathison et al. (1989 ▶); Polak (1982 ▶); Balsamo et al., 1990 ▶; Holan et al. (1984 ▶); Marsman et al. (1999 ▶); Forman (1964 ▶); Bertolasi et al. (1982 ▶); Gilli et al. (1983 ▶); Hökelek et al. (2001 ▶). For related structures, see: Özdemir et al. (2004 ▶); Dinçer et al. (2004 ▶). For the puckering of the cyclobutane ring, see: Swenson et al. (1997 ▶).

Experimental

Crystal data

C20H30N2O2 M = 330.46 Monoclinic, a = 13.0273 (4) Å b = 10.2337 (2) Å c = 18.1262 (6) Å β = 126.574 (2)° V = 1940.69 (10) Å3 Z = 4 Mo Kα radiation μ = 0.07 mm−1 T = 296 K 0.60 × 0.55 × 0.48 mm

Data collection

Stoe IPDS II CCD area-detector diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.964, T max = 0.977 28812 measured reflections 4031 independent reflections 3110 reflections with I > 2σ(I) R int = 0.058

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.171 S = 1.09 4031 reflections 217 parameters H-atom parameters constrained Δρmax = 0.24 e Å−3 Δρmin = −0.21 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811009408/zs2100sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811009408/zs2100Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H30N2O2F(000) = 720
Mr = 330.46Dx = 1.131 Mg m3
Monoclinic, P21/cMelting point: 428 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 13.0273 (4) ÅCell parameters from 29343 reflections
b = 10.2337 (2) Åθ = 1.4–28.0°
c = 18.1262 (6) ŵ = 0.07 mm1
β = 126.574 (2)°T = 296 K
V = 1940.69 (10) Å3Prism, colourless
Z = 40.60 × 0.55 × 0.48 mm
Stoe IPDS II CCD area-detector diffractometer4031 independent reflections
Radiation source: fine-focus sealed tube3110 reflections with I > 2σ(I)
graphiteRint = 0.058
Detector resolution: 6.67 pixels mm-1θmax = 26.5°, θmin = 2.0°
rotation method scansh = −16→16
Absorption correction: integration (X-RED32; Stoe & Cie, 2002)k = −12→12
Tmin = 0.964, Tmax = 0.977l = −22→22
28812 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.171H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.097P)2 + 0.1596P] where P = (Fo2 + 2Fc2)/3
4031 reflections(Δ/σ)max < 0.001
217 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = −0.21 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.36380 (14)−0.05777 (14)0.74190 (10)0.0528 (4)
C20.46281 (15)−0.05329 (16)0.83667 (11)0.0601 (4)
C30.46390 (18)−0.1424 (2)0.89474 (12)0.0715 (5)
H30.5287−0.13660.95750.086*
C40.3733 (2)−0.2391 (2)0.86371 (15)0.0758 (5)
C50.28345 (19)−0.24910 (18)0.77046 (15)0.0752 (5)
H50.2242−0.31670.74760.090*
C60.27696 (16)−0.16278 (16)0.70854 (12)0.0625 (4)
C70.1786 (2)−0.1905 (2)0.60720 (14)0.0886 (6)
H7A0.1295−0.26600.59970.133*
H7B0.2212−0.20660.57940.133*
H7C0.1229−0.11660.57820.133*
C80.57461 (17)0.0403 (2)0.87941 (14)0.0814 (6)
H8A0.56320.09680.83280.122*
H8B0.6524−0.00840.90710.122*
H8C0.57900.09180.92550.122*
C90.3761 (3)−0.3317 (3)0.9297 (2)0.1137 (9)
H9A0.4450−0.30830.99160.171*
H9B0.3885−0.41940.91750.171*
H9C0.2966−0.32650.92190.171*
C100.4242 (2)0.0076 (2)0.63806 (16)0.0834 (6)
H10A0.41540.07530.59790.125*
H10B0.3894−0.07240.60420.125*
H10C0.5131−0.00450.68740.125*
C110.35215 (14)0.04679 (15)0.67740 (11)0.0556 (4)
C120.38414 (15)0.18873 (15)0.71533 (12)0.0603 (4)
H12A0.38570.20030.76910.072*
H12B0.46170.22270.72630.072*
C130.26170 (15)0.24003 (16)0.62660 (12)0.0612 (4)
H130.28040.27440.58530.073*
C140.21439 (16)0.09740 (16)0.60114 (11)0.0622 (4)
H14A0.18400.07340.53940.075*
H14B0.15200.07460.61190.075*
C150.18063 (15)0.33490 (15)0.63429 (12)0.0597 (4)
C160.18719 (17)0.34202 (17)0.71954 (13)0.0659 (4)
H16A0.27310.36580.77130.079*
H16B0.12910.40900.71230.079*
C170.01643 (17)0.1917 (2)0.67605 (14)0.0768 (5)
H17A−0.01360.19870.61270.092*
H17B−0.02880.25560.68630.092*
C18−0.0090 (2)0.0568 (3)0.69414 (19)0.0989 (7)
H18A−0.10000.03940.65320.119*
H18B0.0338−0.00660.68130.119*
C190.1671 (3)0.0674 (3)0.84584 (18)0.1042 (8)
H19A0.21190.00420.83460.125*
H19B0.19680.05740.90890.125*
C200.1967 (2)0.2022 (2)0.83206 (14)0.0853 (6)
H20A0.15440.26580.84510.102*
H20B0.28810.21750.87380.102*
N10.09976 (13)0.41245 (15)0.57100 (11)0.0688 (4)
N20.15302 (12)0.21666 (14)0.73755 (9)0.0607 (4)
O10.09479 (13)0.40408 (15)0.49164 (10)0.0860 (5)
H10.04150.45580.45310.129*
O20.03433 (18)0.0426 (2)0.78590 (14)0.1121 (6)
U11U22U33U12U13U23
C10.0502 (7)0.0468 (8)0.0587 (8)0.0063 (6)0.0309 (7)0.0032 (6)
C20.0531 (8)0.0541 (9)0.0625 (9)0.0078 (6)0.0288 (7)0.0039 (7)
C30.0706 (10)0.0733 (11)0.0618 (10)0.0145 (9)0.0347 (8)0.0132 (8)
C40.0818 (12)0.0698 (11)0.0875 (13)0.0176 (9)0.0567 (11)0.0240 (10)
C50.0735 (11)0.0534 (9)0.1002 (14)−0.0039 (8)0.0526 (11)0.0056 (9)
C60.0595 (9)0.0489 (8)0.0701 (10)−0.0001 (7)0.0337 (8)−0.0010 (7)
C70.0829 (13)0.0665 (11)0.0782 (13)−0.0119 (9)0.0273 (10)−0.0135 (9)
C80.0540 (9)0.0729 (12)0.0757 (12)0.0005 (8)0.0161 (9)0.0020 (9)
C90.132 (2)0.1057 (19)0.130 (2)0.0176 (15)0.0929 (19)0.0460 (16)
C100.0956 (14)0.0795 (12)0.1036 (15)0.0194 (11)0.0748 (13)0.0129 (11)
C110.0547 (8)0.0525 (8)0.0620 (9)0.0068 (6)0.0360 (7)0.0056 (7)
C120.0513 (8)0.0492 (8)0.0768 (10)0.0033 (6)0.0362 (8)0.0077 (7)
C130.0623 (9)0.0582 (9)0.0717 (10)0.0118 (7)0.0447 (8)0.0181 (7)
C140.0623 (9)0.0614 (9)0.0546 (9)0.0093 (7)0.0303 (7)0.0056 (7)
C150.0561 (8)0.0487 (8)0.0770 (10)0.0061 (6)0.0411 (8)0.0153 (7)
C160.0649 (9)0.0578 (9)0.0783 (11)0.0075 (7)0.0443 (9)0.0049 (8)
C170.0589 (10)0.0881 (13)0.0795 (12)0.0028 (9)0.0392 (9)0.0151 (10)
C180.0821 (13)0.1011 (17)0.1184 (19)−0.0112 (12)0.0623 (14)0.0161 (14)
C190.1032 (17)0.135 (2)0.0954 (16)0.0212 (15)0.0707 (15)0.0459 (15)
C200.0821 (12)0.1126 (17)0.0656 (11)0.0095 (11)0.0464 (10)0.0115 (11)
N10.0620 (8)0.0629 (8)0.0853 (10)0.0120 (6)0.0460 (8)0.0260 (7)
N20.0563 (7)0.0677 (8)0.0599 (8)0.0052 (6)0.0357 (6)0.0100 (6)
O10.0755 (8)0.1020 (11)0.0870 (9)0.0268 (7)0.0519 (7)0.0429 (8)
O20.1121 (13)0.1290 (15)0.1348 (15)0.0072 (10)0.0949 (12)0.0415 (11)
C1—C21.406 (2)C12—H12A0.9700
C1—C61.409 (2)C12—H12B0.9700
C1—C111.524 (2)C13—C151.501 (2)
C2—C31.386 (3)C13—C141.544 (2)
C2—C81.515 (3)C13—H130.9800
C3—C41.378 (3)C14—H14A0.9700
C3—H30.9300C14—H14B0.9700
C4—C51.371 (3)C15—N11.271 (2)
C4—C91.509 (3)C15—C161.498 (3)
C5—C61.391 (3)C16—N21.457 (2)
C5—H50.9300C16—H16A0.9700
C6—C71.514 (3)C16—H16B0.9700
C7—H7A0.9600C17—N21.453 (2)
C7—H7B0.9600C17—C181.500 (3)
C7—H7C0.9600C17—H17A0.9700
C8—H8A0.9600C17—H17B0.9700
C8—H8B0.9600C18—O21.410 (3)
C8—H8C0.9600C18—H18A0.9700
C9—H9A0.9600C18—H18B0.9700
C9—H9B0.9600C19—O21.414 (3)
C9—H9C0.9600C19—C201.493 (4)
C10—C111.533 (2)C19—H19A0.9700
C10—H10A0.9600C19—H19B0.9700
C10—H10B0.9600C20—N21.456 (2)
C10—H10C0.9600C20—H20A0.9700
C11—C121.554 (2)C20—H20B0.9700
C11—C141.563 (2)N1—O11.404 (2)
C12—C131.533 (2)O1—H10.8200
C2—C1—C6117.83 (14)H12A—C12—H12B110.8
C2—C1—C11120.93 (14)C15—C13—C12118.29 (15)
C6—C1—C11121.24 (14)C15—C13—C14117.48 (14)
C3—C2—C1119.55 (16)C12—C13—C1488.30 (12)
C3—C2—C8117.12 (16)C15—C13—H13110.3
C1—C2—C8123.24 (16)C12—C13—H13110.3
C4—C3—C2122.95 (17)C14—C13—H13110.3
C4—C3—H3118.5C13—C14—C1190.31 (12)
C2—C3—H3118.5C13—C14—H14A113.6
C5—C4—C3116.83 (17)C11—C14—H14A113.6
C5—C4—C9122.0 (2)C13—C14—H14B113.6
C3—C4—C9121.2 (2)C11—C14—H14B113.6
C4—C5—C6122.97 (18)H14A—C14—H14B110.9
C4—C5—H5118.5N1—C15—C16114.07 (15)
C6—C5—H5118.5N1—C15—C13124.80 (17)
C5—C6—C1119.40 (16)C16—C15—C13121.10 (13)
C5—C6—C7117.43 (17)N2—C16—C15110.55 (14)
C1—C6—C7123.12 (16)N2—C16—H16A109.5
C6—C7—H7A109.5C15—C16—H16A109.5
C6—C7—H7B109.5N2—C16—H16B109.5
H7A—C7—H7B109.5C15—C16—H16B109.5
C6—C7—H7C109.5H16A—C16—H16B108.1
H7A—C7—H7C109.5N2—C17—C18108.85 (16)
H7B—C7—H7C109.5N2—C17—H17A109.9
C2—C8—H8A109.5C18—C17—H17A109.9
C2—C8—H8B109.5N2—C17—H17B109.9
H8A—C8—H8B109.5C18—C17—H17B109.9
C2—C8—H8C109.5H17A—C17—H17B108.3
H8A—C8—H8C109.5O2—C18—C17111.6 (2)
H8B—C8—H8C109.5O2—C18—H18A109.3
C4—C9—H9A109.5C17—C18—H18A109.3
C4—C9—H9B109.5O2—C18—H18B109.3
H9A—C9—H9B109.5C17—C18—H18B109.3
C4—C9—H9C109.5H18A—C18—H18B108.0
H9A—C9—H9C109.5O2—C19—C20110.93 (19)
H9B—C9—H9C109.5O2—C19—H19A109.5
C11—C10—H10A109.5C20—C19—H19A109.5
C11—C10—H10B109.5O2—C19—H19B109.5
H10A—C10—H10B109.5C20—C19—H19B109.5
C11—C10—H10C109.5H19A—C19—H19B108.0
H10A—C10—H10C109.5N2—C20—C19109.40 (19)
H10B—C10—H10C109.5N2—C20—H20A109.8
C1—C11—C10111.39 (13)C19—C20—H20A109.8
C1—C11—C12116.03 (14)N2—C20—H20B109.8
C10—C11—C12111.90 (15)C19—C20—H20B109.8
C1—C11—C14116.62 (13)H20A—C20—H20B108.2
C10—C11—C14111.97 (15)C15—N1—O1113.21 (15)
C12—C11—C1486.87 (11)C17—N2—C20109.05 (15)
C13—C12—C1191.08 (12)C17—N2—C16112.40 (13)
C13—C12—H12A113.5C20—N2—C16113.32 (16)
C11—C12—H12A113.5N1—O1—H1109.5
C13—C12—H12B113.5C18—O2—C19109.51 (16)
C11—C12—H12B113.5
C6—C1—C2—C3−6.9 (2)C11—C12—C13—C15134.65 (15)
C11—C1—C2—C3173.84 (15)C11—C12—C13—C1414.10 (13)
C6—C1—C2—C8169.57 (16)C15—C13—C14—C11−135.28 (15)
C11—C1—C2—C8−9.6 (2)C12—C13—C14—C11−14.01 (13)
C1—C2—C3—C41.8 (3)C1—C11—C14—C13131.49 (14)
C8—C2—C3—C4−174.94 (18)C10—C11—C14—C13−98.55 (16)
C2—C3—C4—C53.5 (3)C12—C11—C14—C1313.83 (13)
C2—C3—C4—C9−178.3 (2)C12—C13—C15—N1159.02 (16)
C3—C4—C5—C6−3.6 (3)C14—C13—C15—N1−97.0 (2)
C9—C4—C5—C6178.3 (2)C12—C13—C15—C16−22.9 (2)
C4—C5—C6—C1−1.6 (3)C14—C13—C15—C1681.1 (2)
C4—C5—C6—C7175.97 (19)N1—C15—C16—N2118.59 (16)
C2—C1—C6—C56.9 (2)C13—C15—C16—N2−59.7 (2)
C11—C1—C6—C5−173.91 (15)N2—C17—C18—O259.1 (2)
C2—C1—C6—C7−170.59 (17)O2—C19—C20—N2−59.6 (3)
C11—C1—C6—C78.6 (3)C16—C15—N1—O1−179.84 (14)
C2—C1—C11—C1091.37 (19)C13—C15—N1—O1−1.6 (2)
C6—C1—C11—C10−87.81 (19)C18—C17—N2—C20−58.0 (2)
C2—C1—C11—C12−38.2 (2)C18—C17—N2—C16175.45 (18)
C6—C1—C11—C12142.60 (15)C19—C20—N2—C1758.7 (2)
C2—C1—C11—C14−138.40 (15)C19—C20—N2—C16−175.29 (17)
C6—C1—C11—C1442.4 (2)C15—C16—N2—C17−74.95 (18)
C1—C11—C12—C13−132.15 (13)C15—C16—N2—C20160.85 (15)
C10—C11—C12—C1398.51 (15)C17—C18—O2—C19−59.2 (3)
C14—C11—C12—C13−13.94 (13)C20—C19—O2—C1859.2 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···N1i0.822.112.7944 (19)141
C16—H16B···O2ii0.972.553.494 (2)165
C19—H19B···O1iii0.972.563.305 (3)134
C12—H12B···Cg1iv0.972.843.777 (3)161
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the benzene ring.

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N1i0.822.112.7944 (19)141
C16—H16B⋯O2ii0.972.553.494 (2)165
C19—H19B⋯O1iii0.972.563.305 (3)134
C12—H12BCg1iv0.972.843.777 (3)161

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  [A contribution to the stereospecific synthesis of antifungal imidazolyloxime-ethers/Oxiconazole nitrate (Sgd 301-76), a new broadspectrum antifungal agent (author's transl)].

Authors:  G Mixich; K Thiele
Journal:  Arzneimittelforschung       Date:  1979

3.  1-Methyl-1-phenyl-3-[1-hydroxyimino-2-(succinimido)ethyl]cyclobutane.

Authors:  Muharrem Dinçer; Namik Ozdemir; Ibrahim Yilmaz; Alaaddin Cukurovali; Orhan Büyükgüngör
Journal:  Acta Crystallogr C       Date:  2004-08-21       Impact factor: 1.172

4.  Oxiconazole, a new imidazole derivative. Evaluation of antifungal activity in vitro and in vivo.

Authors:  A Polak
Journal:  Arzneimittelforschung       Date:  1982

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

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