| Literature DB >> 21754205 |
Manfred Biermann, Kenneth I Hardcastle, Nikolai V Moskalev, Peter A Crooks.
Abstract
The crystal structure of the title compound, C(12)H(14)ClNO, was determined in order to confirm that the chiral center of the mol-ecule has an S configuration. The cyclo-hexa-none ring adopts a chair conformation. The 2-chloro-phenyl ring is slightly twisted from the axial C-N bond, with a N-C-C-C torsion angle of -5.7 (2)°. In the crystal, an inter-molecular N-H⋯O hydrogen bond links adjacent mol-ecules into an infinite chain, which propagates in the b-axis direction.Entities:
Year: 2011 PMID: 21754205 PMCID: PMC3100030 DOI: 10.1107/S1600536811009950
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H14ClNO | |
| Orthorhombic, | Cu |
| Hall symbol: P 2ac 2ab | Cell parameters from 3161 reflections |
| θ = 4.3–64.6° | |
| µ = 2.84 mm−1 | |
| Block, colourless | |
| 0.43 × 0.15 × 0.03 mm |
| Bruker SMART APEX II diffractometer | 1538 independent reflections |
| Radiation source: fine-focus sealed tube | 1521 reflections with |
| graphite | |
| ω scans | θmax = 64.7°, θmin = 4.3° |
| Absorption correction: multi-scan ( | |
| 3449 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1538 reflections | Δρmax = 0.14 e Å−3 |
| 136 parameters | Δρmin = −0.15 e Å−3 |
| 0 restraints | Absolute structure: Flack (1983), 545 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.060 (13) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.2928 (2) | 0.4934 (2) | 0.84577 (8) | 0.0241 (3) | |
| C2 | 0.4469 (2) | 0.3899 (2) | 0.88115 (7) | 0.0248 (4) | |
| C3 | 0.5543 (3) | 0.4618 (2) | 0.93085 (7) | 0.0288 (4) | |
| C4 | 0.6938 (3) | 0.3647 (2) | 0.96124 (9) | 0.0389 (4) | |
| H4 | 0.7637 | 0.4178 | 0.9954 | 0.047* | |
| C5 | 0.7303 (3) | 0.1905 (3) | 0.94148 (10) | 0.0463 (5) | |
| H5 | 0.8264 | 0.1236 | 0.9617 | 0.056* | |
| C6 | 0.6268 (3) | 0.1144 (2) | 0.89243 (10) | 0.0434 (5) | |
| H6 | 0.6508 | −0.0055 | 0.8787 | 0.052* | |
| C7 | 0.4874 (3) | 0.2131 (2) | 0.86316 (8) | 0.0336 (4) | |
| H7 | 0.4166 | 0.1583 | 0.8295 | 0.040* | |
| C8 | 0.1313 (2) | 0.5361 (2) | 0.89240 (8) | 0.0301 (4) | |
| H8A | 0.0653 | 0.4228 | 0.9026 | 0.036* | |
| H8B | 0.1822 | 0.5838 | 0.9338 | 0.036* | |
| C9 | −0.0066 (2) | 0.6718 (2) | 0.86506 (9) | 0.0379 (4) | |
| H9A | −0.0712 | 0.6184 | 0.8271 | 0.045* | |
| H9B | −0.1001 | 0.7003 | 0.8988 | 0.045* | |
| C10 | 0.0903 (3) | 0.8435 (2) | 0.84417 (9) | 0.0380 (4) | |
| H10A | 0.1524 | 0.8986 | 0.8823 | 0.046* | |
| H10B | −0.0018 | 0.9306 | 0.8274 | 0.046* | |
| C11 | 0.2330 (3) | 0.8039 (2) | 0.79098 (8) | 0.0340 (4) | |
| H11A | 0.1691 | 0.7598 | 0.7514 | 0.041* | |
| H11B | 0.2986 | 0.9165 | 0.7795 | 0.041* | |
| C12 | 0.3715 (2) | 0.6647 (2) | 0.81317 (7) | 0.0258 (4) | |
| Cl1 | 0.52113 (6) | 0.68279 (5) | 0.958904 (19) | 0.03641 (13) | |
| N1 | 0.2147 (2) | 0.39391 (19) | 0.79034 (7) | 0.0358 (3) | |
| H1A | 0.3079 | 0.3550 | 0.7641 | 0.054* | |
| H1B | 0.1502 | 0.2974 | 0.8055 | 0.054* | |
| O1 | 0.53524 (16) | 0.67977 (16) | 0.80222 (6) | 0.0351 (3) |
| C1 | 0.0209 (9) | 0.0303 (7) | 0.0211 (8) | −0.0004 (7) | −0.0008 (7) | −0.0029 (6) |
| C2 | 0.0218 (9) | 0.0330 (8) | 0.0197 (8) | −0.0022 (6) | 0.0041 (7) | 0.0037 (6) |
| C3 | 0.0267 (10) | 0.0373 (8) | 0.0223 (8) | −0.0045 (7) | 0.0038 (7) | 0.0031 (6) |
| C4 | 0.0300 (10) | 0.0599 (11) | 0.0267 (9) | −0.0057 (8) | −0.0052 (8) | 0.0135 (8) |
| C5 | 0.0389 (11) | 0.0555 (11) | 0.0444 (11) | 0.0114 (10) | 0.0014 (9) | 0.0248 (9) |
| C6 | 0.0478 (13) | 0.0346 (9) | 0.0477 (12) | 0.0070 (8) | 0.0074 (10) | 0.0117 (8) |
| C7 | 0.0382 (11) | 0.0326 (7) | 0.0300 (9) | −0.0014 (8) | 0.0040 (8) | 0.0029 (6) |
| C8 | 0.0232 (9) | 0.0409 (9) | 0.0262 (9) | −0.0019 (7) | 0.0036 (7) | −0.0012 (7) |
| C9 | 0.0234 (9) | 0.0546 (10) | 0.0357 (9) | 0.0059 (10) | 0.0011 (7) | −0.0063 (7) |
| C10 | 0.0345 (10) | 0.0427 (9) | 0.0367 (10) | 0.0112 (8) | −0.0040 (8) | −0.0027 (8) |
| C11 | 0.0351 (10) | 0.0375 (8) | 0.0293 (8) | 0.0039 (8) | −0.0035 (8) | 0.0031 (7) |
| C12 | 0.0279 (10) | 0.0344 (8) | 0.0150 (7) | 0.0001 (7) | −0.0020 (6) | −0.0016 (6) |
| Cl1 | 0.0387 (2) | 0.0428 (2) | 0.0278 (2) | −0.00777 (19) | −0.00231 (17) | −0.00948 (14) |
| N1 | 0.0314 (9) | 0.0453 (7) | 0.0307 (8) | −0.0022 (7) | −0.0032 (7) | −0.0123 (6) |
| O1 | 0.0266 (7) | 0.0477 (6) | 0.0310 (6) | −0.0013 (6) | 0.0023 (5) | 0.0107 (5) |
| C1—N1 | 1.468 (2) | C8—C9 | 1.525 (2) |
| C1—C2 | 1.537 (2) | C8—H8A | 0.9900 |
| C1—C8 | 1.543 (2) | C8—H8B | 0.9900 |
| C1—C12 | 1.545 (2) | C9—C10 | 1.517 (3) |
| C2—C3 | 1.388 (2) | C9—H9A | 0.9900 |
| C2—C7 | 1.394 (2) | C9—H9B | 0.9900 |
| C3—C4 | 1.389 (3) | C10—C11 | 1.530 (3) |
| C3—Cl1 | 1.7548 (16) | C10—H10A | 0.9900 |
| C4—C5 | 1.380 (3) | C10—H10B | 0.9900 |
| C4—H4 | 0.9500 | C11—C12 | 1.511 (2) |
| C5—C6 | 1.375 (3) | C11—H11A | 0.9900 |
| C5—H5 | 0.9500 | C11—H11B | 0.9900 |
| C6—C7 | 1.384 (3) | C12—O1 | 1.212 (2) |
| C6—H6 | 0.9500 | N1—H1A | 0.9100 |
| C7—H7 | 0.9500 | N1—H1B | 0.9100 |
| N1—C1—C2 | 113.13 (13) | C9—C8—H8B | 108.8 |
| N1—C1—C8 | 106.87 (14) | C1—C8—H8B | 108.8 |
| C2—C1—C8 | 111.20 (13) | H8A—C8—H8B | 107.7 |
| N1—C1—C12 | 102.84 (13) | C10—C9—C8 | 110.82 (15) |
| C2—C1—C12 | 110.31 (13) | C10—C9—H9A | 109.5 |
| C8—C1—C12 | 112.21 (13) | C8—C9—H9A | 109.5 |
| C3—C2—C7 | 115.98 (16) | C10—C9—H9B | 109.5 |
| C3—C2—C1 | 124.08 (15) | C8—C9—H9B | 109.5 |
| C7—C2—C1 | 119.93 (15) | H9A—C9—H9B | 108.1 |
| C2—C3—C4 | 122.46 (16) | C9—C10—C11 | 110.58 (15) |
| C2—C3—Cl1 | 121.54 (13) | C9—C10—H10A | 109.5 |
| C4—C3—Cl1 | 116.01 (14) | C11—C10—H10A | 109.5 |
| C5—C4—C3 | 119.62 (18) | C9—C10—H10B | 109.5 |
| C5—C4—H4 | 120.2 | C11—C10—H10B | 109.5 |
| C3—C4—H4 | 120.2 | H10A—C10—H10B | 108.1 |
| C6—C5—C4 | 119.67 (18) | C12—C11—C10 | 111.48 (14) |
| C6—C5—H5 | 120.2 | C12—C11—H11A | 109.3 |
| C4—C5—H5 | 120.2 | C10—C11—H11A | 109.3 |
| C5—C6—C7 | 119.77 (18) | C12—C11—H11B | 109.3 |
| C5—C6—H6 | 120.1 | C10—C11—H11B | 109.3 |
| C7—C6—H6 | 120.1 | H11A—C11—H11B | 108.0 |
| C6—C7—C2 | 122.49 (18) | O1—C12—C11 | 122.06 (16) |
| C6—C7—H7 | 118.8 | O1—C12—C1 | 121.14 (16) |
| C2—C7—H7 | 118.8 | C11—C12—C1 | 116.62 (15) |
| C9—C8—C1 | 113.91 (15) | C1—N1—H1A | 109.3 |
| C9—C8—H8A | 108.8 | C1—N1—H1B | 109.2 |
| C1—C8—H8A | 108.8 | H1A—N1—H1B | 109.5 |
| N1—C1—C2—C3 | 173.46 (15) | C1—C2—C7—C6 | 178.79 (17) |
| C8—C1—C2—C3 | −66.3 (2) | N1—C1—C8—C9 | −68.43 (18) |
| C12—C1—C2—C3 | 58.89 (19) | C2—C1—C8—C9 | 167.66 (14) |
| N1—C1—C2—C7 | −5.7 (2) | C12—C1—C8—C9 | 43.57 (19) |
| C8—C1—C2—C7 | 114.58 (16) | C1—C8—C9—C10 | −54.5 (2) |
| C12—C1—C2—C7 | −120.26 (15) | C8—C9—C10—C11 | 60.3 (2) |
| C7—C2—C3—C4 | −0.1 (2) | C9—C10—C11—C12 | −56.4 (2) |
| C1—C2—C3—C4 | −179.30 (15) | C10—C11—C12—O1 | −137.39 (18) |
| C7—C2—C3—Cl1 | 179.79 (12) | C10—C11—C12—C1 | 47.45 (19) |
| C1—C2—C3—Cl1 | 0.6 (2) | N1—C1—C12—O1 | −101.44 (18) |
| C2—C3—C4—C5 | 0.7 (3) | C2—C1—C12—O1 | 19.5 (2) |
| Cl1—C3—C4—C5 | −179.21 (14) | C8—C1—C12—O1 | 144.07 (16) |
| C3—C4—C5—C6 | −0.7 (3) | N1—C1—C12—C11 | 73.77 (17) |
| C4—C5—C6—C7 | 0.2 (3) | C2—C1—C12—C11 | −165.31 (14) |
| C5—C6—C7—C2 | 0.4 (3) | C8—C1—C12—C11 | −40.72 (19) |
| C3—C2—C7—C6 | −0.4 (2) |
| H··· | ||||
| N1—H1A···O1i | 0.91 | 2.20 | 3.066 (2) | 160 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.91 | 2.20 | 3.066 (2) | 160 |
Symmetry code: (i) .