Literature DB >> 21754198

3-Methyl-5-oxo-4-(2-phenyl-hydrazinyl-idene)-4,5-dihydro-1H-pyrazole-1-carbothio-amide.

Hoong-Kun Fun, Safra Izuani Jama Asik, Ibrahim Abdul Razak, Shobhitha Shetty, Balakrishna Kalluraya.   

Abstract

In the title compound, C(11)H(11)N(5)OS, the pyrazole ring is approximately planar, with a maximum deviation of 0.010 (2) Å. The dihedral angles between the benzene ring and the pyrazole and carbothio-amide groups are 5.42 (9) and 10.61 (18)°, respectively. An intra-molecular N-H⋯O hydrogen bond generates an S(6) ring motif. In the crystal, mol-ecules are connected by inter-molecular N-H⋯O and C-H⋯S hydrogen bonds, forming R(2) (2)(12) ring motifs. In addition, there is a π-π stacking inter-action [centroid-centroid distance = 3.5188 (11) Å] between the pyrazole and benzene rings. These inter-actions link the mol-ecules into infinite chains along [001].

Entities:  

Year:  2011        PMID: 21754198      PMCID: PMC3099837          DOI: 10.1107/S1600536811009779

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to and applications of pyrazole derivatives, see: Rai & Kalluraya (2006 ▶); Rai et al. (2008 ▶); Sridhar & Perumal (2003 ▶). For graph-set theory, see: Bernstein et al. (1995 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C11H11N5OS M = 261.31 Monoclinic, a = 7.7388 (1) Å b = 16.1103 (3) Å c = 11.3575 (2) Å β = 121.058 (1)° V = 1213.00 (3) Å3 Z = 4 Mo Kα radiation μ = 0.26 mm−1 T = 296 K 0.53 × 0.39 × 0.13 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.874, T max = 0.967 16258 measured reflections 4393 independent reflections 3037 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.135 S = 1.05 4393 reflections 164 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.39 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811009779/sj5118sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811009779/sj5118Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H11N5OSF(000) = 544
Mr = 261.31Dx = 1.431 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5770 reflections
a = 7.7388 (1) Åθ = 2.5–31.9°
b = 16.1103 (3) ŵ = 0.26 mm1
c = 11.3575 (2) ÅT = 296 K
β = 121.058 (1)°Plate, orange
V = 1213.00 (3) Å30.53 × 0.39 × 0.13 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer4393 independent reflections
Radiation source: sealed tube3037 reflections with I > 2σ(I)
graphiteRint = 0.026
φ and ω scansθmax = 32.6°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −11→11
Tmin = 0.874, Tmax = 0.967k = −24→23
16258 measured reflectionsl = −17→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.135H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0587P)2 + 0.2537P] where P = (Fo2 + 2Fc2)/3
4393 reflections(Δ/σ)max < 0.001
164 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.39 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.35472 (10)0.29034 (2)0.30227 (5)0.07026 (19)
O10.36818 (17)0.14963 (6)0.49606 (10)0.0434 (2)
N10.26541 (17)0.00165 (7)0.57723 (11)0.0346 (2)
H1B0.30360.05230.59890.041*
N20.23279 (17)−0.02868 (7)0.46071 (11)0.0340 (2)
N30.25183 (18)0.05536 (7)0.18342 (11)0.0340 (2)
N40.30783 (17)0.12552 (6)0.27173 (11)0.0324 (2)
N50.3303 (2)0.19488 (8)0.10601 (13)0.0478 (3)
H5B0.31610.14700.06850.057*
H5C0.34390.23840.06780.057*
C10.2876 (2)−0.01706 (10)0.79423 (14)0.0413 (3)
H1A0.33760.03670.81820.050*
C20.2625 (3)−0.06542 (11)0.88499 (15)0.0494 (4)
H2A0.2961−0.04410.97030.059*
C30.1883 (3)−0.14496 (11)0.84978 (17)0.0509 (4)
H3A0.1732−0.17750.91150.061*
C40.1363 (3)−0.17618 (10)0.72246 (19)0.0523 (4)
H4A0.0839−0.22960.69830.063*
C50.1611 (2)−0.12903 (9)0.62989 (16)0.0433 (3)
H5A0.1272−0.15050.54460.052*
C60.23757 (19)−0.04923 (8)0.66727 (13)0.0337 (3)
C70.25637 (19)0.01943 (7)0.37735 (12)0.0308 (2)
C80.31689 (19)0.10634 (8)0.39492 (12)0.0313 (3)
C90.2218 (2)−0.00556 (8)0.24546 (13)0.0328 (3)
C100.1592 (3)−0.08981 (9)0.18412 (16)0.0481 (4)
H10A0.0995−0.08620.08630.072*
H10B0.0625−0.11210.20460.072*
H10C0.2751−0.12550.22190.072*
C110.3313 (2)0.20147 (8)0.22208 (14)0.0356 (3)
U11U22U33U12U13U23
S10.1363 (5)0.0316 (2)0.0759 (3)−0.0167 (2)0.0783 (4)−0.01097 (18)
O10.0638 (7)0.0371 (5)0.0345 (5)−0.0008 (4)0.0291 (5)−0.0053 (4)
N10.0439 (6)0.0335 (5)0.0316 (5)0.0008 (4)0.0233 (5)0.0044 (4)
N20.0390 (6)0.0347 (5)0.0320 (5)0.0033 (4)0.0210 (5)0.0043 (4)
N30.0454 (6)0.0316 (5)0.0304 (5)−0.0027 (4)0.0233 (5)−0.0037 (4)
N40.0459 (6)0.0276 (5)0.0302 (5)−0.0019 (4)0.0242 (5)−0.0015 (4)
N50.0785 (10)0.0355 (6)0.0431 (6)−0.0039 (6)0.0411 (7)0.0037 (5)
C10.0478 (8)0.0442 (7)0.0362 (6)−0.0027 (6)0.0247 (6)0.0024 (6)
C20.0543 (9)0.0645 (10)0.0351 (7)0.0010 (7)0.0271 (7)0.0084 (7)
C30.0547 (9)0.0569 (9)0.0507 (8)0.0075 (7)0.0339 (7)0.0219 (7)
C40.0645 (10)0.0377 (7)0.0662 (10)0.0024 (7)0.0420 (9)0.0121 (7)
C50.0561 (9)0.0370 (7)0.0448 (8)0.0019 (6)0.0318 (7)0.0042 (6)
C60.0345 (6)0.0375 (6)0.0330 (6)0.0050 (5)0.0202 (5)0.0091 (5)
C70.0368 (6)0.0298 (5)0.0298 (5)0.0014 (5)0.0201 (5)0.0018 (4)
C80.0381 (6)0.0309 (5)0.0297 (5)0.0024 (5)0.0208 (5)0.0004 (4)
C90.0397 (7)0.0310 (6)0.0314 (6)−0.0003 (5)0.0210 (5)−0.0015 (4)
C100.0700 (10)0.0342 (7)0.0471 (8)−0.0090 (6)0.0351 (8)−0.0083 (6)
C110.0441 (7)0.0307 (6)0.0377 (6)−0.0003 (5)0.0252 (6)0.0024 (5)
S1—C111.6560 (13)C1—H1A0.9300
O1—C81.2218 (15)C2—C31.377 (3)
N1—N21.3073 (15)C2—H2A0.9300
N1—C61.4111 (16)C3—C41.380 (3)
N1—H1B0.8600C3—H3A0.9300
N2—C71.3072 (16)C4—C51.389 (2)
N3—C91.2972 (17)C4—H4A0.9300
N3—N41.4222 (14)C5—C61.387 (2)
N4—C111.3979 (16)C5—H5A0.9300
N4—C81.3988 (16)C7—C91.4366 (17)
N5—C111.3185 (18)C7—C81.4572 (17)
N5—H5B0.8602C9—C101.4880 (19)
N5—H5C0.8600C10—H10A0.9600
C1—C21.383 (2)C10—H10B0.9600
C1—C61.3863 (19)C10—H10C0.9600
N2—N1—C6119.64 (11)C6—C5—H5A120.7
N2—N1—H1B120.2C4—C5—H5A120.7
C6—N1—H1B120.2C1—C6—C5120.73 (13)
C7—N2—N1119.04 (11)C1—C6—N1118.13 (12)
C9—N3—N4107.04 (10)C5—C6—N1121.13 (12)
C11—N4—C8130.31 (11)N2—C7—C9124.65 (12)
C11—N4—N3117.83 (10)N2—C7—C8128.73 (12)
C8—N4—N3111.70 (10)C9—C7—C8106.61 (10)
C11—N5—H5B120.0O1—C8—N4129.69 (12)
C11—N5—H5C120.0O1—C8—C7127.07 (12)
H5B—N5—H5C120.0N4—C8—C7103.20 (10)
C2—C1—C6119.56 (14)N3—C9—C7111.42 (11)
C2—C1—H1A120.2N3—C9—C10122.83 (12)
C6—C1—H1A120.2C7—C9—C10125.75 (12)
C3—C2—C1120.38 (15)C9—C10—H10A109.5
C3—C2—H2A119.8C9—C10—H10B109.5
C1—C2—H2A119.8H10A—C10—H10B109.5
C2—C3—C4119.73 (14)C9—C10—H10C109.5
C2—C3—H3A120.1H10A—C10—H10C109.5
C4—C3—H3A120.1H10B—C10—H10C109.5
C3—C4—C5120.96 (16)N5—C11—N4113.45 (11)
C3—C4—H4A119.5N5—C11—S1124.20 (10)
C5—C4—H4A119.5N4—C11—S1122.34 (10)
C6—C5—C4118.63 (15)
C6—N1—N2—C7179.04 (11)C11—N4—C8—C7173.49 (13)
C9—N3—N4—C11−174.52 (12)N3—N4—C8—C7−1.73 (14)
C9—N3—N4—C81.36 (15)N2—C7—C8—O14.4 (2)
C6—C1—C2—C3−0.1 (2)C9—C7—C8—O1−176.61 (13)
C1—C2—C3—C4−0.8 (3)N2—C7—C8—N4−177.54 (13)
C2—C3—C4—C51.2 (3)C9—C7—C8—N41.46 (13)
C3—C4—C5—C6−0.7 (2)N4—N3—C9—C7−0.33 (15)
C2—C1—C6—C50.6 (2)N4—N3—C9—C10179.58 (13)
C2—C1—C6—N1−179.84 (13)N2—C7—C9—N3178.31 (12)
C4—C5—C6—C1−0.2 (2)C8—C7—C9—N3−0.73 (15)
C4—C5—C6—N1−179.78 (13)N2—C7—C9—C10−1.6 (2)
N2—N1—C6—C1175.36 (12)C8—C7—C9—C10179.36 (14)
N2—N1—C6—C5−5.05 (19)C8—N4—C11—N5174.38 (13)
N1—N2—C7—C9−178.74 (12)N3—N4—C11—N5−10.64 (18)
N1—N2—C7—C80.1 (2)C8—N4—C11—S1−6.4 (2)
C11—N4—C8—O1−8.5 (2)N3—N4—C11—S1168.56 (10)
N3—N4—C8—O1176.27 (13)
D—H···AD—HH···AD···AD—H···A
N1—H1B···O10.862.162.8147 (16)132
N5—H5C···O1i0.862.032.8806 (15)172
C1—H1A···S1ii0.932.803.6838 (16)159
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1B⋯O10.862.162.8147 (16)132
N5—H5C⋯O1i0.862.032.8806 (15)172
C1—H1A⋯S1ii0.932.803.6838 (16)159

Symmetry codes: (i) ; (ii) .

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