| Literature DB >> 21754195 |
Andrzej Okuniewski1, Agnieszka Dąbrowska, Jaroslaw Chojnacki.
Abstract
In the title compound, C(9)H(20)N(2)S, the n-butyl groups are in syn and anti positions in relation to the C=S bond. In the crystal, two mol-ecules are connected by two N-H⋯S=C hydrogen bonds into a centrosymmetric dimer. Another N-H⋯S=C hydrogen bond links the dimers, forming layers with a hydro-philic inter-ior and a hydro-phobic exterior, which spread across the (100) plane. Inter-lacing of the external butyl groups combines these layers into a three-dimensional structure.Entities:
Year: 2011 PMID: 21754195 PMCID: PMC3099899 DOI: 10.1107/S1600536811009743
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H20N2S | |
| Monoclinic, | Melting point: 336(1) K |
| Hall symbol: -P 2ybc | Mo |
| Cell parameters from 2942 reflections | |
| θ = 2.6–28.6° | |
| µ = 0.24 mm−1 | |
| β = 90.476 (5)° | |
| Prism, clear colourless | |
| 0.48 × 0.28 × 0.09 mm |
| Oxford Diffraction Xcalibur Sapphire2 diffractometer | 2247 independent reflections |
| graphite | 1656 reflections with |
| Detector resolution: 8.1883 pixels mm-1 | |
| ω scans | θmax = 26°, θmin = 2.6° |
| Absorption correction: analytical [ | |
| 5268 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2247 reflections | (Δ/σ)max < 0.001 |
| 119 parameters | Δρmax = 0.45 e Å−3 |
| 2 restraints | Δρmin = −0.27 e Å−3 |
| Experimental. CrysAlisPro, Oxford Diffraction Ltd., Version 1.171.33.66 (Oxford Diffraction, 2010) Analytical numeric absorption correction using a multifaceted crystal model based on expressions derived by Clark & Reid (1995). |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.16510 (4) | 0.55610 (5) | 1.03064 (5) | 0.02246 (18) | |
| N1 | 0.03660 (13) | 0.60898 (18) | 0.80521 (17) | 0.0218 (4) | |
| N2 | 0.19164 (13) | 0.72585 (17) | 0.80620 (18) | 0.0229 (4) | |
| C1 | 0.12922 (15) | 0.63626 (19) | 0.8705 (2) | 0.0209 (4) | |
| C2 | −0.00052 (15) | 0.6657 (2) | 0.6656 (2) | 0.0225 (5) | |
| H2A | 0.0525 | 0.649 | 0.5877 | 0.027* | |
| H2B | −0.0082 | 0.7629 | 0.6769 | 0.027* | |
| C3 | −0.10604 (15) | 0.6065 (2) | 0.6181 (2) | 0.0232 (5) | |
| H3A | −0.1004 | 0.5086 | 0.6174 | 0.028* | |
| H3B | −0.1608 | 0.6314 | 0.6909 | 0.028* | |
| C4 | −0.13954 (16) | 0.6542 (2) | 0.4653 (2) | 0.0260 (5) | |
| H4A | −0.0831 | 0.6327 | 0.3938 | 0.031* | |
| H4B | −0.1475 | 0.7518 | 0.4676 | 0.031* | |
| C5 | −0.24282 (17) | 0.5926 (2) | 0.4116 (2) | 0.0332 (5) | |
| H5A | −0.2359 | 0.4959 | 0.4103 | 0.05* | |
| H5B | −0.259 | 0.6244 | 0.3112 | 0.05* | |
| H5C | −0.3001 | 0.618 | 0.4785 | 0.05* | |
| C6 | 0.29696 (15) | 0.7629 (2) | 0.8598 (2) | 0.0239 (5) | |
| H6A | 0.296 | 0.7677 | 0.9695 | 0.029* | |
| H6B | 0.3145 | 0.8523 | 0.8218 | 0.029* | |
| C7 | 0.38310 (15) | 0.6662 (2) | 0.8128 (2) | 0.0254 (5) | |
| H7A | 0.365 | 0.5764 | 0.8489 | 0.03* | |
| H7B | 0.3855 | 0.6629 | 0.7031 | 0.03* | |
| C8 | 0.49139 (17) | 0.7044 (2) | 0.8722 (3) | 0.0355 (6) | |
| H8A | 0.489 | 0.7081 | 0.9819 | 0.043* | |
| H8B | 0.5097 | 0.7941 | 0.8357 | 0.043* | |
| C9 | 0.57675 (19) | 0.6074 (3) | 0.8255 (3) | 0.0469 (7) | |
| H9A | 0.5583 | 0.5182 | 0.8596 | 0.07* | |
| H9B | 0.6446 | 0.634 | 0.8697 | 0.07* | |
| H9C | 0.5824 | 0.6075 | 0.7172 | 0.07* | |
| H1 | −0.0032 (14) | 0.5586 (19) | 0.854 (2) | 0.028 (6)* | |
| H2 | 0.1715 (15) | 0.7675 (18) | 0.7292 (15) | 0.019 (6)* |
| S1 | 0.0254 (3) | 0.0207 (3) | 0.0213 (3) | 0.0005 (2) | 0.00074 (19) | 0.0018 (2) |
| N1 | 0.0218 (9) | 0.0250 (9) | 0.0188 (8) | −0.0043 (8) | 0.0011 (7) | 0.0019 (7) |
| N2 | 0.0238 (9) | 0.0227 (9) | 0.0221 (9) | −0.0016 (7) | −0.0019 (7) | 0.0047 (7) |
| C1 | 0.0251 (10) | 0.0180 (10) | 0.0197 (10) | 0.0039 (8) | 0.0051 (8) | −0.0024 (8) |
| C2 | 0.0257 (10) | 0.0213 (11) | 0.0206 (10) | 0.0003 (9) | 0.0037 (8) | 0.0015 (8) |
| C3 | 0.0234 (10) | 0.0223 (10) | 0.0238 (11) | −0.0007 (8) | 0.0013 (8) | 0.0018 (8) |
| C4 | 0.0325 (12) | 0.0223 (11) | 0.0232 (11) | −0.0027 (9) | −0.0003 (9) | 0.0014 (8) |
| C5 | 0.0325 (12) | 0.0355 (13) | 0.0313 (12) | −0.0036 (10) | −0.0068 (10) | 0.0028 (10) |
| C6 | 0.0226 (10) | 0.0219 (11) | 0.0272 (11) | −0.0047 (9) | −0.0010 (8) | 0.0011 (8) |
| C7 | 0.0251 (11) | 0.0280 (11) | 0.0230 (10) | 0.0000 (9) | −0.0003 (8) | 0.0020 (9) |
| C8 | 0.0276 (12) | 0.0329 (13) | 0.0460 (14) | −0.0016 (10) | −0.0010 (10) | 0.0020 (11) |
| C9 | 0.0292 (13) | 0.0475 (16) | 0.0641 (18) | 0.0056 (12) | 0.0016 (12) | 0.0049 (14) |
| S1—C1 | 1.712 (2) | C5—H5A | 0.98 |
| N1—C1 | 1.334 (2) | C5—H5B | 0.98 |
| N1—C2 | 1.456 (2) | C5—H5C | 0.98 |
| N1—H1 | 0.844 (9) | C6—C7 | 1.524 (3) |
| N2—C1 | 1.335 (3) | C6—H6A | 0.99 |
| N2—C6 | 1.461 (3) | C6—H6B | 0.99 |
| N2—H2 | 0.849 (9) | C7—C8 | 1.515 (3) |
| C2—C3 | 1.519 (3) | C7—H7A | 0.99 |
| C2—H2A | 0.99 | C7—H7B | 0.99 |
| C2—H2B | 0.99 | C8—C9 | 1.518 (3) |
| C3—C4 | 1.515 (3) | C8—H8A | 0.99 |
| C3—H3A | 0.99 | C8—H8B | 0.99 |
| C3—H3B | 0.99 | C9—H9A | 0.98 |
| C4—C5 | 1.521 (3) | C9—H9B | 0.98 |
| C4—H4A | 0.99 | C9—H9C | 0.98 |
| C4—H4B | 0.99 | ||
| C1—N1—C2 | 125.10 (17) | H5A—C5—H5B | 109.5 |
| C1—N1—H1 | 114.7 (15) | C4—C5—H5C | 109.5 |
| C2—N1—H1 | 120.1 (15) | H5A—C5—H5C | 109.5 |
| C1—N2—C6 | 124.74 (17) | H5B—C5—H5C | 109.5 |
| C1—N2—H2 | 121.0 (14) | N2—C6—C7 | 113.32 (17) |
| C6—N2—H2 | 114.2 (14) | N2—C6—H6A | 108.9 |
| N1—C1—N2 | 117.90 (18) | C7—C6—H6A | 108.9 |
| N1—C1—S1 | 119.96 (15) | N2—C6—H6B | 108.9 |
| N2—C1—S1 | 122.13 (15) | C7—C6—H6B | 108.9 |
| N1—C2—C3 | 111.42 (16) | H6A—C6—H6B | 107.7 |
| N1—C2—H2A | 109.3 | C8—C7—C6 | 112.61 (18) |
| C3—C2—H2A | 109.3 | C8—C7—H7A | 109.1 |
| N1—C2—H2B | 109.3 | C6—C7—H7A | 109.1 |
| C3—C2—H2B | 109.3 | C8—C7—H7B | 109.1 |
| H2A—C2—H2B | 108 | C6—C7—H7B | 109.1 |
| C4—C3—C2 | 111.70 (16) | H7A—C7—H7B | 107.8 |
| C4—C3—H3A | 109.3 | C7—C8—C9 | 112.3 (2) |
| C2—C3—H3A | 109.3 | C7—C8—H8A | 109.1 |
| C4—C3—H3B | 109.3 | C9—C8—H8A | 109.1 |
| C2—C3—H3B | 109.3 | C7—C8—H8B | 109.1 |
| H3A—C3—H3B | 107.9 | C9—C8—H8B | 109.1 |
| C3—C4—C5 | 113.14 (17) | H8A—C8—H8B | 107.9 |
| C3—C4—H4A | 109 | C8—C9—H9A | 109.5 |
| C5—C4—H4A | 109 | C8—C9—H9B | 109.5 |
| C3—C4—H4B | 109 | H9A—C9—H9B | 109.5 |
| C5—C4—H4B | 109 | C8—C9—H9C | 109.5 |
| H4A—C4—H4B | 107.8 | H9A—C9—H9C | 109.5 |
| C4—C5—H5A | 109.5 | H9B—C9—H9C | 109.5 |
| C4—C5—H5B | 109.5 | ||
| C2—N1—C1—N2 | 2.5 (3) | N1—C2—C3—C4 | −173.97 (16) |
| C2—N1—C1—S1 | −176.99 (15) | C2—C3—C4—C5 | 177.74 (17) |
| C6—N2—C1—N1 | −177.36 (17) | C1—N2—C6—C7 | 81.5 (2) |
| C6—N2—C1—S1 | 2.1 (3) | N2—C6—C7—C8 | −178.71 (17) |
| C1—N1—C2—C3 | 176.27 (17) | C6—C7—C8—C9 | 179.74 (19) |
| H··· | ||||
| N1—H1···S1i | 0.84 (1) | 2.58 (1) | 3.3943 (17) | 164 (2) |
| N2—H2···S1ii | 0.85 (1) | 2.52 (1) | 3.3319 (17) | 159 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯S1i | 0.84 (1) | 2.58 (1) | 3.3943 (17) | 164 (2) |
| N2—H2⋯S1ii | 0.85 (1) | 2.52 (1) | 3.3319 (17) | 159 (2) |
Symmetry codes: (i) ; (ii) .