Literature DB >> 21754189

6,6'-Dieth-oxy-2,2'-[hexane-1,6-diylbis(nitrilo-methanylyl-idene)]diphenol.

Kwang Ha1.   

Abstract

The title compound, C(24)H(32)N(2)O(4), is a polydentate Schiff base and reveals strong intra-molecular O-H⋯N hydrogen bonding between the hy-droxy O atom and the imino N atom, with an O⋯N distance of 2.570 (3) Å. In the crystal, a centre of inversion is located at the mid-point of the compound. The diimino-hexyl-ene chain is almost ideally in the anti conformation, with an average dihedral angle of 179.0°.

Entities:  

Year:  2011        PMID: 21754189      PMCID: PMC3099770          DOI: 10.1107/S1600536811009445

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Bermejo et al. (2007 ▶); Fun et al. (2009 ▶); Ha (2010 ▶).

Experimental

Crystal data

C24H32N2O4 M = 412.52 Triclinic, a = 6.9094 (13) Å b = 6.9184 (13) Å c = 11.936 (2) Å α = 91.271 (5)° β = 99.677 (4)° γ = 102.550 (4)° V = 547.97 (18) Å3 Z = 1 Mo Kα radiation μ = 0.09 mm−1 T = 200 K 0.26 × 0.23 × 0.23 mm

Data collection

Bruker SMART 1000 CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.862, T max = 1.000 3505 measured reflections 2140 independent reflections 1258 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.062 wR(F 2) = 0.168 S = 1.02 2140 reflections 138 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.21 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811009445/ds2098sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811009445/ds2098Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C24H32N2O4Z = 1
Mr = 412.52F(000) = 222
Triclinic, P1Dx = 1.250 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.9094 (13) ÅCell parameters from 873 reflections
b = 6.9184 (13) Åθ = 3.1–25.7°
c = 11.936 (2) ŵ = 0.09 mm1
α = 91.271 (5)°T = 200 K
β = 99.677 (4)°Stick, yellow
γ = 102.550 (4)°0.26 × 0.23 × 0.23 mm
V = 547.97 (18) Å3
Bruker SMART 1000 CCD diffractometer2140 independent reflections
Radiation source: fine-focus sealed tube1258 reflections with I > 2σ(I)
graphiteRint = 0.031
φ and ω scansθmax = 26.0°, θmin = 3.0°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −8→8
Tmin = 0.862, Tmax = 1.000k = −8→8
3505 measured reflectionsl = −14→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.062Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.168H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0725P)2 + 0.0011P] where P = (Fo2 + 2Fc2)/3
2140 reflections(Δ/σ)max < 0.001
138 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.21 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.5421 (2)0.2477 (3)0.24546 (17)0.0424 (5)
H10.57140.35700.28340.064*
O20.5003 (2)−0.0878 (2)0.13057 (16)0.0405 (5)
N10.7714 (3)0.5589 (3)0.35709 (19)0.0383 (6)
C10.9039 (3)0.3153 (3)0.2687 (2)0.0312 (6)
C20.7131 (3)0.1965 (3)0.2277 (2)0.0318 (6)
C30.6946 (4)0.0168 (4)0.1652 (2)0.0327 (6)
C40.8654 (4)−0.0394 (4)0.1439 (2)0.0367 (7)
H40.8526−0.15990.10070.044*
C51.0562 (4)0.0782 (4)0.1849 (2)0.0399 (7)
H51.17290.03740.17050.048*
C61.0750 (4)0.2543 (4)0.2467 (2)0.0357 (7)
H61.20510.33480.27450.043*
C70.4707 (4)−0.2781 (3)0.0726 (2)0.0400 (7)
H7A0.5449−0.36390.11960.048*
H7B0.5193−0.2641−0.00090.048*
C80.2475 (4)−0.3664 (4)0.0530 (3)0.0492 (8)
H8A0.2003−0.37250.12610.074*
H8B0.2202−0.50050.01700.074*
H8C0.1767−0.28350.00320.074*
C90.9234 (4)0.5017 (4)0.3333 (2)0.0351 (6)
H91.05400.58310.35850.042*
C100.7949 (4)0.7477 (4)0.4222 (2)0.0394 (7)
H10A0.87270.85680.38460.047*
H10B0.87070.74210.49980.047*
C110.5920 (4)0.7884 (3)0.4300 (2)0.0384 (7)
H11A0.51430.67660.46570.046*
H11B0.51790.79390.35200.046*
C120.6021 (3)0.9794 (4)0.4974 (2)0.0366 (7)
H12A0.67350.97290.57600.044*
H12B0.68191.09110.46260.044*
U11U22U33U12U13U23
O10.0309 (10)0.0439 (11)0.0537 (13)0.0112 (8)0.0094 (9)−0.0110 (9)
O20.0304 (10)0.0369 (10)0.0523 (13)0.0049 (7)0.0070 (9)−0.0091 (9)
N10.0373 (12)0.0389 (13)0.0416 (14)0.0150 (10)0.0080 (11)−0.0040 (11)
C10.0289 (13)0.0342 (14)0.0323 (15)0.0099 (10)0.0068 (12)0.0001 (12)
C20.0278 (13)0.0360 (14)0.0356 (16)0.0128 (11)0.0096 (12)0.0012 (12)
C30.0330 (14)0.0323 (14)0.0331 (15)0.0076 (11)0.0061 (12)0.0017 (12)
C40.0387 (14)0.0367 (14)0.0372 (16)0.0129 (11)0.0087 (13)−0.0053 (12)
C50.0318 (14)0.0461 (16)0.0465 (18)0.0148 (12)0.0127 (13)−0.0029 (14)
C60.0282 (13)0.0389 (15)0.0401 (16)0.0075 (11)0.0066 (12)−0.0007 (12)
C70.0397 (15)0.0322 (15)0.0469 (18)0.0078 (11)0.0052 (13)−0.0025 (13)
C80.0450 (16)0.0375 (16)0.060 (2)−0.0003 (12)0.0075 (15)−0.0070 (14)
C90.0305 (13)0.0347 (14)0.0387 (16)0.0049 (11)0.0056 (12)−0.0011 (12)
C100.0410 (15)0.0387 (15)0.0385 (17)0.0123 (12)0.0037 (13)−0.0083 (13)
C110.0401 (15)0.0351 (15)0.0429 (17)0.0121 (11)0.0112 (13)−0.0035 (13)
C120.0381 (15)0.0336 (15)0.0387 (16)0.0107 (11)0.0056 (13)−0.0032 (12)
O1—C21.353 (3)C7—C81.506 (4)
O1—H10.8400C7—H7A0.9900
O2—C31.369 (3)C7—H7B0.9900
O2—C71.431 (3)C8—H8A0.9800
N1—C91.271 (3)C8—H8B0.9800
N1—C101.469 (3)C8—H8C0.9800
C1—C21.396 (3)C9—H90.9500
C1—C61.401 (3)C10—C111.506 (3)
C1—C91.456 (3)C10—H10A0.9900
C2—C31.406 (3)C10—H10B0.9900
C3—C41.379 (3)C11—C121.514 (3)
C4—C51.393 (3)C11—H11A0.9900
C4—H40.9500C11—H11B0.9900
C5—C61.380 (3)C12—C12i1.510 (4)
C5—H50.9500C12—H12A0.9900
C6—H60.9500C12—H12B0.9900
C2—O1—H1109.5C7—C8—H8A109.5
C3—O2—C7117.46 (18)C7—C8—H8B109.5
C9—N1—C10121.2 (2)H8A—C8—H8B109.5
C2—C1—C6119.5 (2)C7—C8—H8C109.5
C2—C1—C9119.9 (2)H8A—C8—H8C109.5
C6—C1—C9120.6 (2)H8B—C8—H8C109.5
O1—C2—C1122.4 (2)N1—C9—C1122.2 (2)
O1—C2—C3117.9 (2)N1—C9—H9118.9
C1—C2—C3119.8 (2)C1—C9—H9118.9
O2—C3—C4126.0 (2)N1—C10—C11110.5 (2)
O2—C3—C2114.4 (2)N1—C10—H10A109.6
C4—C3—C2119.6 (2)C11—C10—H10A109.6
C3—C4—C5120.9 (2)N1—C10—H10B109.6
C3—C4—H4119.6C11—C10—H10B109.6
C5—C4—H4119.6H10A—C10—H10B108.1
C6—C5—C4119.7 (2)C10—C11—C12114.0 (2)
C6—C5—H5120.2C10—C11—H11A108.7
C4—C5—H5120.2C12—C11—H11A108.7
C5—C6—C1120.6 (2)C10—C11—H11B108.7
C5—C6—H6119.7C12—C11—H11B108.7
C1—C6—H6119.7H11A—C11—H11B107.6
O2—C7—C8106.4 (2)C12i—C12—C11113.5 (3)
O2—C7—H7A110.4C12i—C12—H12A108.9
C8—C7—H7A110.4C11—C12—H12A108.9
O2—C7—H7B110.4C12i—C12—H12B108.9
C8—C7—H7B110.4C11—C12—H12B108.9
H7A—C7—H7B108.6H12A—C12—H12B107.7
C6—C1—C2—O1−179.6 (2)C3—C4—C5—C6−0.7 (4)
C9—C1—C2—O10.1 (4)C4—C5—C6—C10.2 (4)
C6—C1—C2—C30.2 (4)C2—C1—C6—C50.0 (4)
C9—C1—C2—C3179.9 (2)C9—C1—C6—C5−179.6 (3)
C7—O2—C3—C43.8 (4)C3—O2—C7—C8175.5 (2)
C7—O2—C3—C2−176.2 (2)C10—N1—C9—C1−179.9 (3)
O1—C2—C3—O2−0.9 (4)C2—C1—C9—N12.1 (4)
C1—C2—C3—O2179.3 (2)C6—C1—C9—N1−178.3 (3)
O1—C2—C3—C4179.1 (2)C9—N1—C10—C11175.2 (3)
C1—C2—C3—C4−0.7 (4)N1—C10—C11—C12179.1 (2)
O2—C3—C4—C5−179.1 (2)C10—C11—C12—C12i178.8 (3)
C2—C3—C4—C50.9 (4)
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.841.832.570 (3)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N10.841.832.570 (3)147
  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  N,N'-Bis(2-hydr-oxy-3-eth-oxybenzyl-idene)butane-1,4-diamine.

Authors:  Hoong-Kun Fun; Reza Kia; Hadi Kargar; Arezoo Jamshidvand
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-06

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total

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