Literature DB >> 21754187

2-(4-Chloro-benzamido)-acetic acid.

Islam Ullah Khan, Muneeb Hayat Khan, Muhammad Nadeem Arshad, Mehmet Akkurt.   

Abstract

In the crystal structure of the title mol-ecule, C(9)H(8)ClNO(3), adjacent mol-ecules are arranged into centrosymmetric dimers through pairs of inter-molecular O-H⋯O inter-actions. Inter-molecular N-H⋯O hydrogen bonds link the dimers into a layer parallel to the bc plane. In the layer, mol-ecules are packed in a face-to-face π-stacked arrangment, showing π-π stacking inter-actions between the benzene rings with a centroid-centroid distance of 3.6884 (8) Å.

Entities:  

Year:  2011        PMID: 21754187      PMCID: PMC3099855          DOI: 10.1107/S1600536811009536

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For crystallographic studies of benzamide derivatives, see: Donnelly et al. (2008 ▶); Mugnoli et al. (1991 ▶); Stensland et al. (1995 ▶). For standard bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C9H8ClNO3 M = 213.61 Monoclinic, a = 10.5035 (2) Å b = 13.2105 (4) Å c = 7.1226 (2) Å β = 102.203 (1)° V = 965.98 (4) Å3 Z = 4 Mo Kα radiation μ = 0.37 mm−1 T = 296 K 0.36 × 0.21 × 0.13 mm

Data collection

Bruker APEXII CCD diffractometer 9027 measured reflections 2365 independent reflections 1627 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.098 S = 1.02 2365 reflections 133 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.21 e Å−3 Δρmin = −0.25 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811009536/is2688sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811009536/is2688Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H8ClNO3F(000) = 440
Mr = 213.61Dx = 1.469 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3071 reflections
a = 10.5035 (2) Åθ = 2.5–26.5°
b = 13.2105 (4) ŵ = 0.37 mm1
c = 7.1226 (2) ÅT = 296 K
β = 102.203 (1)°Needle, colourless
V = 965.98 (4) Å30.36 × 0.21 × 0.13 mm
Z = 4
Bruker APEXII CCD diffractometer1627 reflections with I > 2σ(I)
Radiation source: sealed tubeRint = 0.028
graphiteθmax = 28.3°, θmin = 3.3°
φ and ω scansh = −13→13
9027 measured reflectionsk = −17→17
2365 independent reflectionsl = −9→9
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.098H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0427P)2 + 0.1658P] where P = (Fo2 + 2Fc2)/3
2365 reflections(Δ/σ)max = 0.001
133 parametersΔρmax = 0.21 e Å3
2 restraintsΔρmin = −0.24 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl11.15861 (4)0.81838 (4)0.19567 (7)0.0678 (2)
O10.65691 (11)0.52525 (8)0.26411 (16)0.0518 (4)
O20.46720 (11)0.64368 (9)0.49155 (17)0.0576 (4)
O30.31367 (11)0.53263 (9)0.37136 (17)0.0519 (4)
N10.53959 (13)0.65903 (11)0.1375 (2)0.0515 (5)
C10.88594 (15)0.60968 (12)0.1921 (2)0.0457 (5)
C21.00353 (16)0.65563 (13)0.1908 (2)0.0499 (6)
C31.00957 (15)0.75964 (13)0.1880 (2)0.0453 (5)
C40.90087 (16)0.81827 (12)0.1838 (2)0.0465 (5)
C50.78344 (15)0.77170 (11)0.1832 (2)0.0423 (5)
C60.77497 (14)0.66710 (11)0.1887 (2)0.0379 (4)
C70.65311 (14)0.61215 (11)0.2002 (2)0.0407 (5)
C80.41924 (16)0.61044 (15)0.1527 (2)0.0539 (6)
C90.40478 (14)0.59869 (11)0.3568 (2)0.0411 (5)
H10.881000.539400.195300.0550*
H1N0.538 (2)0.7167 (13)0.092 (3)0.0810*
H1O0.315 (2)0.5241 (19)0.487 (2)0.1020*
H21.077600.616900.191700.0600*
H40.906500.888500.181300.0560*
H50.709300.810800.179100.0510*
H8A0.415400.544100.093300.0650*
H8B0.346800.650000.082500.0650*
U11U22U33U12U13U23
Cl10.0478 (3)0.0785 (4)0.0752 (3)−0.0209 (2)0.0086 (2)−0.0017 (2)
O10.0541 (7)0.0422 (7)0.0616 (7)0.0003 (5)0.0180 (5)0.0100 (5)
O20.0571 (8)0.0578 (7)0.0566 (7)−0.0178 (6)0.0089 (6)−0.0106 (6)
O30.0439 (6)0.0499 (7)0.0600 (7)−0.0122 (5)0.0067 (5)0.0017 (6)
N10.0389 (8)0.0556 (9)0.0604 (9)0.0027 (6)0.0113 (6)0.0169 (7)
C10.0449 (9)0.0391 (8)0.0547 (9)0.0039 (7)0.0141 (7)0.0045 (7)
C20.0392 (9)0.0546 (10)0.0566 (10)0.0065 (7)0.0119 (7)0.0016 (7)
C30.0414 (9)0.0532 (10)0.0401 (8)−0.0082 (7)0.0060 (6)−0.0003 (7)
C40.0524 (10)0.0391 (8)0.0461 (9)−0.0040 (7)0.0061 (7)0.0011 (7)
C50.0431 (9)0.0409 (8)0.0425 (8)0.0065 (6)0.0081 (6)0.0036 (6)
C60.0395 (8)0.0407 (8)0.0338 (7)0.0019 (6)0.0084 (6)0.0048 (6)
C70.0435 (9)0.0406 (9)0.0394 (8)0.0018 (6)0.0117 (6)0.0035 (6)
C80.0374 (9)0.0698 (12)0.0530 (10)−0.0044 (8)0.0065 (7)−0.0001 (8)
C90.0300 (8)0.0351 (8)0.0568 (9)0.0026 (6)0.0062 (7)−0.0004 (7)
Cl1—C31.7377 (17)C3—C41.375 (2)
O1—C71.2325 (18)C4—C51.378 (2)
O2—C91.1993 (19)C5—C61.386 (2)
O3—C91.3153 (19)C6—C71.489 (2)
O3—H1O0.829 (14)C8—C91.501 (2)
N1—C81.442 (2)C1—H10.9300
N1—C71.334 (2)C2—H20.9300
N1—H1N0.827 (18)C4—H40.9300
C1—C21.378 (2)C5—H50.9300
C1—C61.387 (2)C8—H8A0.9700
C2—C31.376 (2)C8—H8B0.9700
C9—O3—H1O108.0 (16)N1—C8—C9112.86 (13)
C7—N1—C8120.26 (14)O2—C9—O3123.33 (14)
C7—N1—H1N120.1 (15)O2—C9—C8125.00 (14)
C8—N1—H1N119.6 (15)O3—C9—C8111.66 (13)
C2—C1—C6120.68 (15)C2—C1—H1120.00
C1—C2—C3118.96 (15)C6—C1—H1120.00
C2—C3—C4121.49 (15)C1—C2—H2120.00
Cl1—C3—C2119.31 (13)C3—C2—H2121.00
Cl1—C3—C4119.18 (13)C3—C4—H4120.00
C3—C4—C5119.17 (15)C5—C4—H4120.00
C4—C5—C6120.53 (14)C4—C5—H5120.00
C1—C6—C5119.16 (14)C6—C5—H5120.00
C1—C6—C7117.49 (13)N1—C8—H8A109.00
C5—C6—C7123.29 (14)N1—C8—H8B109.00
N1—C7—C6118.25 (13)C9—C8—H8A109.00
O1—C7—N1120.86 (14)C9—C8—H8B109.00
O1—C7—C6120.89 (13)H8A—C8—H8B108.00
C8—N1—C7—C6−177.54 (13)C3—C4—C5—C60.6 (2)
C7—N1—C8—C967.7 (2)C4—C5—C6—C7176.22 (13)
C8—N1—C7—O13.2 (2)C4—C5—C6—C1−0.9 (2)
C2—C1—C6—C7−177.03 (13)C1—C6—C7—O120.2 (2)
C2—C1—C6—C50.3 (2)C1—C6—C7—N1−159.08 (14)
C6—C1—C2—C30.6 (2)C5—C6—C7—O1−156.98 (14)
C1—C2—C3—Cl1177.54 (11)C5—C6—C7—N123.8 (2)
C1—C2—C3—C4−0.9 (2)N1—C8—C9—O216.7 (2)
Cl1—C3—C4—C5−178.18 (11)N1—C8—C9—O3−163.65 (14)
C2—C3—C4—C50.3 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O2i0.83 (2)2.06 (2)2.8491 (19)160 (2)
O3—H1O···O1ii0.83 (1)1.85 (2)2.6613 (16)165 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯O2i0.83 (2)2.06 (2)2.8491 (19)160 (2)
O3—H1O⋯O1ii0.83 (1)1.85 (2)2.6613 (16)165 (2)

Symmetry codes: (i) ; (ii) .

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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Assembling an isomer grid: the isomorphous 4-, 3- and 2-fluoro-N'-(4-pyridyl)benzamides.

Authors:  Katie Donnelly; John F Gallagher; Alan J Lough
Journal:  Acta Crystallogr C       Date:  2008-05-21       Impact factor: 1.172

3.  Structure validation in chemical crystallography.

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