| Literature DB >> 21754178 |
P A Suchetan, Sabine Foro, B Thimme Gowda.
Abstract
In the crystal structure of the title compound, C(13)H(9)ClN(2)O(5)S, the N-H bond is trans to the C=O bond (H-N-C-O torsion angle = 158.4°). The dihedral angle between the two aromatic rings is 87.8 (1)°. In the crystal, mol-ecules are linked into chains along the b axis via N-H⋯O hydrogen bonds.Entities:
Year: 2011 PMID: 21754178 PMCID: PMC3099929 DOI: 10.1107/S160053681100969X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H9ClN2O5S | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 1764 reflections |
| θ = 2.8–27.8° | |
| µ = 0.44 mm−1 | |
| β = 104.45 (1)° | Prism, colourless |
| 0.32 × 0.18 × 0.06 mm | |
| Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector | 2221 independent reflections |
| Radiation source: fine-focus sealed tube | 2052 reflections with |
| graphite | |
| Rotation method data acquisition using ω and φ scans | θmax = 26.4°, θmin = 2.8° |
| Absorption correction: multi-scan ( | |
| 2688 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.031 | |
| 2221 reflections | Δρmax = 0.19 e Å−3 |
| 202 parameters | Δρmin = −0.22 e Å−3 |
| 2 restraints | Absolute structure: Flack (1983), 581 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.10 (8) |
| Experimental. CrysAlis RED (Oxford Diffraction, 2009) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.7268 (2) | 0.3471 (6) | 0.8688 (2) | 0.0313 (6) | |
| C2 | 0.7745 (2) | 0.2212 (8) | 0.7918 (2) | 0.0410 (6) | |
| H2 | 0.7339 | 0.0840 | 0.7493 | 0.049* | |
| C3 | 0.8836 (3) | 0.3014 (7) | 0.7785 (2) | 0.0489 (9) | |
| H3 | 0.9174 | 0.2178 | 0.7277 | 0.059* | |
| C4 | 0.9402 (3) | 0.5060 (7) | 0.8417 (3) | 0.0473 (8) | |
| C5 | 0.8926 (3) | 0.6356 (7) | 0.9171 (3) | 0.0487 (8) | |
| H5 | 0.9324 | 0.7760 | 0.9579 | 0.058* | |
| C6 | 0.7843 (3) | 0.5541 (6) | 0.9314 (2) | 0.0400 (7) | |
| H6 | 0.7510 | 0.6378 | 0.9826 | 0.048* | |
| C7 | 0.4676 (2) | 0.4805 (6) | 0.7118 (2) | 0.0325 (6) | |
| C8 | 0.3785 (2) | 0.6855 (5) | 0.66280 (19) | 0.0305 (7) | |
| C9 | 0.3743 (3) | 0.7628 (8) | 0.5547 (2) | 0.0465 (7) | |
| H9 | 0.4248 | 0.6857 | 0.5168 | 0.056* | |
| C10 | 0.2952 (3) | 0.9537 (7) | 0.5037 (2) | 0.0511 (9) | |
| H10 | 0.2930 | 1.0083 | 0.4320 | 0.061* | |
| C11 | 0.2195 (3) | 1.0625 (6) | 0.5603 (2) | 0.0419 (7) | |
| C12 | 0.2217 (3) | 0.9902 (7) | 0.6672 (2) | 0.0464 (8) | |
| H12 | 0.1702 | 1.0665 | 0.7041 | 0.056* | |
| C13 | 0.3026 (2) | 0.8007 (6) | 0.7184 (2) | 0.0430 (8) | |
| H13 | 0.3058 | 0.7504 | 0.7908 | 0.052* | |
| N1 | 0.48802 (19) | 0.4379 (5) | 0.82564 (17) | 0.0292 (5) | |
| H1N | 0.471 (2) | 0.560 (5) | 0.865 (2) | 0.035* | |
| N2 | 0.1351 (2) | 1.2683 (6) | 0.5060 (2) | 0.0551 (7) | |
| O1 | 0.56993 (19) | −0.0216 (4) | 0.84448 (18) | 0.0447 (5) | |
| O2 | 0.59606 (16) | 0.2753 (5) | 1.00622 (14) | 0.0427 (5) | |
| O3 | 0.51982 (18) | 0.3525 (5) | 0.65776 (16) | 0.0485 (6) | |
| O4 | 0.0734 (3) | 1.3697 (6) | 0.5600 (2) | 0.0791 (9) | |
| O5 | 0.1323 (3) | 1.3233 (6) | 0.4105 (2) | 0.0880 (10) | |
| Cl1 | 1.07887 (8) | 0.6005 (3) | 0.82955 (9) | 0.0835 (4) | |
| S1 | 0.59243 (6) | 0.23417 (14) | 0.89175 (5) | 0.03068 (15) |
| C1 | 0.0300 (13) | 0.0312 (15) | 0.0316 (13) | −0.0001 (12) | 0.0058 (10) | 0.0047 (12) |
| C2 | 0.0413 (14) | 0.0426 (17) | 0.0402 (13) | −0.0036 (16) | 0.0122 (11) | −0.0049 (17) |
| C3 | 0.0430 (16) | 0.064 (3) | 0.0437 (15) | 0.0003 (16) | 0.0182 (13) | −0.0025 (16) |
| C4 | 0.0324 (15) | 0.061 (2) | 0.0476 (17) | −0.0074 (15) | 0.0083 (13) | 0.0122 (17) |
| C5 | 0.0422 (16) | 0.046 (2) | 0.0529 (18) | −0.0138 (15) | 0.0016 (14) | −0.0060 (16) |
| C6 | 0.0421 (15) | 0.0353 (18) | 0.0411 (15) | −0.0010 (13) | 0.0077 (12) | −0.0040 (13) |
| C7 | 0.0315 (13) | 0.0380 (16) | 0.0280 (13) | −0.0067 (12) | 0.0075 (10) | −0.0051 (13) |
| C8 | 0.0316 (12) | 0.0320 (19) | 0.0264 (11) | −0.0074 (11) | 0.0045 (10) | 0.0008 (11) |
| C9 | 0.0531 (17) | 0.057 (2) | 0.0314 (13) | 0.0059 (18) | 0.0139 (12) | 0.0024 (16) |
| C10 | 0.066 (2) | 0.055 (2) | 0.0294 (14) | 0.0004 (17) | 0.0054 (14) | 0.0114 (15) |
| C11 | 0.0419 (15) | 0.0377 (18) | 0.0382 (15) | −0.0029 (13) | −0.0047 (12) | 0.0029 (13) |
| C12 | 0.0415 (16) | 0.056 (2) | 0.0424 (16) | 0.0087 (15) | 0.0125 (13) | 0.0072 (16) |
| C13 | 0.0372 (14) | 0.057 (2) | 0.0352 (14) | 0.0053 (14) | 0.0095 (11) | 0.0109 (14) |
| N1 | 0.0332 (12) | 0.0273 (13) | 0.0270 (11) | 0.0010 (10) | 0.0077 (9) | −0.0023 (9) |
| N2 | 0.0610 (17) | 0.0388 (18) | 0.0528 (15) | 0.0008 (15) | −0.0094 (13) | 0.0046 (16) |
| O1 | 0.0487 (12) | 0.0259 (11) | 0.0616 (13) | −0.0035 (9) | 0.0176 (10) | −0.0016 (10) |
| O2 | 0.0467 (11) | 0.0505 (15) | 0.0321 (9) | 0.0011 (10) | 0.0119 (8) | 0.0092 (10) |
| O3 | 0.0523 (12) | 0.0615 (15) | 0.0341 (10) | 0.0126 (11) | 0.0151 (9) | −0.0034 (10) |
| O4 | 0.083 (2) | 0.0648 (19) | 0.0776 (18) | 0.0285 (16) | −0.0022 (15) | 0.0016 (15) |
| O5 | 0.109 (2) | 0.079 (2) | 0.0632 (17) | 0.0196 (17) | −0.0012 (15) | 0.0318 (16) |
| Cl1 | 0.0452 (5) | 0.1158 (9) | 0.0939 (8) | −0.0266 (6) | 0.0258 (5) | 0.0049 (7) |
| S1 | 0.0341 (3) | 0.0258 (3) | 0.0332 (3) | −0.0019 (3) | 0.0103 (2) | 0.0029 (3) |
| C1—C6 | 1.379 (4) | C8—C13 | 1.386 (4) |
| C1—C2 | 1.382 (4) | C9—C10 | 1.380 (5) |
| C1—S1 | 1.764 (3) | C9—H9 | 0.9300 |
| C2—C3 | 1.389 (4) | C10—C11 | 1.379 (5) |
| C2—H2 | 0.9300 | C10—H10 | 0.9300 |
| C3—C4 | 1.369 (5) | C11—C12 | 1.377 (4) |
| C3—H3 | 0.9300 | C11—N2 | 1.480 (4) |
| C4—C5 | 1.375 (5) | C12—C13 | 1.388 (4) |
| C4—Cl1 | 1.736 (3) | C12—H12 | 0.9300 |
| C5—C6 | 1.387 (4) | C13—H13 | 0.9300 |
| C5—H5 | 0.9300 | N1—S1 | 1.655 (2) |
| C6—H6 | 0.9300 | N1—H1N | 0.843 (17) |
| C7—O3 | 1.206 (3) | N2—O5 | 1.216 (4) |
| C7—N1 | 1.397 (3) | N2—O4 | 1.218 (4) |
| C7—C8 | 1.491 (4) | O1—S1 | 1.421 (2) |
| C8—C9 | 1.394 (3) | O2—S1 | 1.4333 (18) |
| C6—C1—C2 | 121.3 (3) | C10—C9—H9 | 120.0 |
| C6—C1—S1 | 119.0 (2) | C11—C10—C9 | 119.2 (3) |
| C2—C1—S1 | 119.6 (2) | C11—C10—H10 | 120.4 |
| C3—C2—C1 | 119.4 (3) | C9—C10—H10 | 120.4 |
| C3—C2—H2 | 120.3 | C12—C11—C10 | 122.0 (3) |
| C1—C2—H2 | 120.3 | C12—C11—N2 | 118.7 (3) |
| C4—C3—C2 | 118.7 (3) | C10—C11—N2 | 119.3 (3) |
| C4—C3—H3 | 120.6 | C11—C12—C13 | 118.4 (3) |
| C2—C3—H3 | 120.6 | C11—C12—H12 | 120.8 |
| C5—C4—C3 | 122.3 (3) | C13—C12—H12 | 120.8 |
| C5—C4—Cl1 | 118.4 (3) | C8—C13—C12 | 120.7 (3) |
| C3—C4—Cl1 | 119.2 (3) | C8—C13—H13 | 119.7 |
| C4—C5—C6 | 119.1 (3) | C12—C13—H13 | 119.7 |
| C4—C5—H5 | 120.5 | C7—N1—S1 | 121.38 (18) |
| C6—C5—H5 | 120.5 | C7—N1—H1N | 118 (2) |
| C5—C6—C1 | 119.1 (3) | S1—N1—H1N | 115 (2) |
| C5—C6—H6 | 120.4 | O5—N2—O4 | 124.8 (3) |
| C1—C6—H6 | 120.4 | O5—N2—C11 | 117.5 (3) |
| O3—C7—N1 | 120.2 (3) | O4—N2—C11 | 117.7 (3) |
| O3—C7—C8 | 123.1 (2) | O1—S1—O2 | 120.16 (14) |
| N1—C7—C8 | 116.7 (2) | O1—S1—N1 | 108.96 (13) |
| C9—C8—C13 | 119.6 (3) | O2—S1—N1 | 103.91 (12) |
| C9—C8—C7 | 116.4 (3) | O1—S1—C1 | 108.01 (14) |
| C13—C8—C7 | 124.0 (2) | O2—S1—C1 | 107.98 (12) |
| C8—C9—C10 | 120.0 (3) | N1—S1—C1 | 107.14 (12) |
| C8—C9—H9 | 120.0 | ||
| C6—C1—C2—C3 | 1.1 (5) | N2—C11—C12—C13 | −178.8 (3) |
| S1—C1—C2—C3 | −176.4 (2) | C9—C8—C13—C12 | 0.6 (4) |
| C1—C2—C3—C4 | −0.7 (5) | C7—C8—C13—C12 | −179.9 (3) |
| C2—C3—C4—C5 | −0.4 (5) | C11—C12—C13—C8 | −0.6 (5) |
| C2—C3—C4—Cl1 | 177.7 (3) | O3—C7—N1—S1 | 6.0 (4) |
| C3—C4—C5—C6 | 1.2 (5) | C8—C7—N1—S1 | −174.85 (18) |
| Cl1—C4—C5—C6 | −177.0 (2) | C12—C11—N2—O5 | −177.8 (3) |
| C4—C5—C6—C1 | −0.7 (5) | C10—C11—N2—O5 | 3.7 (5) |
| C2—C1—C6—C5 | −0.4 (4) | C12—C11—N2—O4 | 2.0 (5) |
| S1—C1—C6—C5 | 177.1 (2) | C10—C11—N2—O4 | −176.5 (3) |
| O3—C7—C8—C9 | −12.6 (4) | C7—N1—S1—O1 | −58.9 (2) |
| N1—C7—C8—C9 | 168.2 (3) | C7—N1—S1—O2 | 171.9 (2) |
| O3—C7—C8—C13 | 167.9 (3) | C7—N1—S1—C1 | 57.7 (2) |
| N1—C7—C8—C13 | −11.3 (4) | C6—C1—S1—O1 | −162.3 (2) |
| C13—C8—C9—C10 | 0.3 (5) | C2—C1—S1—O1 | 15.2 (3) |
| C7—C8—C9—C10 | −179.3 (3) | C6—C1—S1—O2 | −31.0 (3) |
| C8—C9—C10—C11 | −1.1 (5) | C2—C1—S1—O2 | 146.6 (2) |
| C9—C10—C11—C12 | 1.2 (5) | C6—C1—S1—N1 | 80.4 (2) |
| C9—C10—C11—N2 | 179.6 (3) | C2—C1—S1—N1 | −102.0 (2) |
| C10—C11—C12—C13 | −0.4 (5) |
| H··· | ||||
| N1—H1N···O2i | 0.84 (2) | 2.24 (2) | 3.054 (3) | 162 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.84 (2) | 2.24 (2) | 3.054 (3) | 162 (3) |
Symmetry code: (i) .