Literature DB >> 21754175

Hexane-1,6-diaminium bis-[3,4,5,6-tetra-chloro-2-(meth-oxy-carbon-yl)benzoate].

Jian Li1.   

Abstract

In the anion of the title salt, C(6)H(18)N(2) (2+)·2C(9)H(3)Cl(4)O(4) (-), the meth-oxy-carbonyl and carboxyl groups are aligned at dihedral angles of 71.0 (3) and 100.9 (3)°, respectively, with the aromatic ring. The asymmetric unit contains half a cation and one anion. In the crystal, inter-molecular N-H⋯O, C-H⋯Cl and C-H⋯O hydrogen bonds link the components into a three-dimensional network.

Entities:  

Year:  2011        PMID: 21754175      PMCID: PMC3099857          DOI: 10.1107/S1600536811008506

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Li (2011 ▶); Liang (2008 ▶).

Experimental

Crystal data

C6H18N2 2+·2C9H3Cl4O4 − M = 752.05 Monoclinic, a = 31.236 (3) Å b = 5.8911 (4) Å c = 18.3762 (18) Å β = 107.118 (1)° V = 3231.7 (5) Å3 Z = 4 Mo Kα radiation μ = 0.74 mm−1 T = 298 K 0.37 × 0.28 × 0.15 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1997 ▶) T min = 0.770, T max = 0.897 7618 measured reflections 2829 independent reflections 1817 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.154 S = 1.04 2829 reflections 192 parameters H-atom parameters constrained Δρmax = 0.51 e Å−3 Δρmin = −0.41 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811008506/bt5475sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811008506/bt5475Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C6H18N22+·2C9H3Cl4O4F(000) = 1528
Mr = 752.05Dx = 1.546 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
a = 31.236 (3) ÅCell parameters from 2053 reflections
b = 5.8911 (4) Åθ = 2.7–26.1°
c = 18.3762 (18) ŵ = 0.74 mm1
β = 107.118 (1)°T = 298 K
V = 3231.7 (5) Å3Block, colorless
Z = 40.37 × 0.28 × 0.15 mm
Bruker SMART CCD diffractometer2829 independent reflections
Radiation source: fine-focus sealed tube1817 reflections with I > 2σ(I)
graphiteRint = 0.037
φ and ω scansθmax = 25.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 1997)h = −36→29
Tmin = 0.770, Tmax = 0.897k = −6→7
7618 measured reflectionsl = −21→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.057Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.154H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0489P)2 + 12.9951P] where P = (Fo2 + 2Fc2)/3
2829 reflections(Δ/σ)max < 0.001
192 parametersΔρmax = 0.51 e Å3
0 restraintsΔρmin = −0.41 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.16469 (4)0.8320 (3)0.02548 (7)0.0738 (5)
Cl20.10240 (5)0.4349 (3)−0.04960 (8)0.0845 (5)
Cl30.03378 (5)0.2434 (2)0.02771 (10)0.0912 (6)
Cl40.02472 (5)0.4714 (3)0.17526 (10)0.0918 (6)
N10.21033 (11)0.4754 (6)0.26915 (19)0.0485 (9)
H1A0.20120.61310.25120.073*
H1B0.19180.37150.24170.073*
H1C0.23790.45100.26620.073*
O10.06089 (14)0.9497 (7)0.2473 (2)0.0906 (13)
O20.12386 (14)0.7821 (10)0.3033 (2)0.1124 (18)
O30.14859 (11)1.1892 (6)0.1748 (2)0.0769 (12)
O40.19786 (10)0.9160 (5)0.21430 (17)0.0537 (8)
C10.09506 (15)0.8248 (9)0.2481 (3)0.0558 (12)
C20.16017 (13)0.9909 (7)0.1788 (2)0.0400 (10)
C30.09403 (13)0.7360 (7)0.1712 (2)0.0432 (10)
C40.12605 (12)0.8139 (6)0.1380 (2)0.0373 (9)
C50.12705 (13)0.7243 (7)0.0688 (2)0.0458 (10)
C60.09835 (14)0.5502 (7)0.0339 (3)0.0511 (12)
C70.06762 (15)0.4685 (8)0.0678 (3)0.0559 (13)
C80.06449 (14)0.5651 (8)0.1346 (3)0.0542 (12)
C90.0599 (3)1.0419 (13)0.3203 (3)0.122 (3)
H9A0.06050.91970.35520.184*
H9B0.03301.12900.31340.184*
H9C0.08551.13770.34050.184*
C100.21042 (15)0.4596 (8)0.3498 (3)0.0531 (12)
H10A0.22530.32100.37220.064*
H10B0.17980.45470.35230.064*
C110.23434 (15)0.6622 (8)0.3940 (2)0.0498 (11)
H11A0.26450.66930.38940.060*
H11B0.21880.79970.37180.060*
C120.23681 (14)0.6522 (8)0.4771 (2)0.0517 (11)
H12A0.25070.51020.49830.062*
H12B0.20660.65410.48160.062*
U11U22U33U12U13U23
Cl10.0691 (9)0.0891 (11)0.0710 (8)−0.0250 (7)0.0329 (7)−0.0234 (7)
Cl20.0825 (10)0.0811 (11)0.0783 (9)−0.0055 (8)0.0057 (8)−0.0407 (8)
Cl30.0688 (9)0.0500 (8)0.1278 (13)−0.0243 (7)−0.0131 (9)−0.0073 (8)
Cl40.0664 (9)0.0909 (12)0.1210 (13)−0.0240 (8)0.0322 (9)0.0288 (10)
N10.044 (2)0.033 (2)0.060 (2)0.0003 (16)0.0021 (17)−0.0084 (17)
O10.112 (3)0.090 (3)0.067 (2)0.053 (3)0.021 (2)0.007 (2)
O20.094 (3)0.181 (5)0.058 (2)0.071 (3)0.016 (2)0.010 (3)
O30.063 (2)0.035 (2)0.105 (3)0.0031 (16)−0.019 (2)−0.0100 (18)
O40.0404 (17)0.0431 (18)0.0658 (19)−0.0031 (14)−0.0025 (15)0.0026 (15)
C10.041 (3)0.066 (3)0.061 (3)0.012 (2)0.015 (2)0.018 (3)
C20.038 (2)0.035 (3)0.043 (2)−0.0057 (19)0.0049 (18)−0.0034 (19)
C30.034 (2)0.037 (2)0.054 (3)0.0065 (19)0.0067 (19)0.010 (2)
C40.031 (2)0.027 (2)0.047 (2)0.0021 (16)0.0018 (17)−0.0004 (18)
C50.037 (2)0.041 (3)0.055 (3)−0.0035 (19)0.007 (2)−0.008 (2)
C60.041 (2)0.036 (3)0.065 (3)0.002 (2)−0.002 (2)−0.011 (2)
C70.040 (3)0.036 (3)0.075 (3)−0.004 (2)−0.008 (2)−0.003 (2)
C80.035 (2)0.045 (3)0.076 (3)−0.003 (2)0.007 (2)0.019 (3)
C90.171 (7)0.127 (6)0.072 (4)0.084 (6)0.042 (4)0.010 (4)
C100.048 (3)0.046 (3)0.063 (3)−0.001 (2)0.012 (2)−0.003 (2)
C110.049 (3)0.042 (3)0.053 (3)0.002 (2)0.007 (2)−0.007 (2)
C120.045 (3)0.052 (3)0.057 (3)0.001 (2)0.014 (2)−0.007 (2)
Cl1—C51.723 (5)C4—C51.386 (6)
Cl2—C61.716 (5)C5—C61.389 (6)
Cl3—C71.721 (4)C6—C71.376 (7)
Cl4—C81.719 (5)C7—C81.382 (7)
N1—C101.484 (5)C9—H9A0.9600
N1—H1A0.8900C9—H9B0.9600
N1—H1B0.8900C9—H9C0.9600
N1—H1C0.8900C10—C111.511 (6)
O1—C11.293 (5)C10—H10A0.9700
O1—C91.456 (7)C10—H10B0.9700
O2—C11.168 (5)C11—C121.507 (6)
O3—C21.218 (5)C11—H11A0.9700
O4—C21.247 (5)C11—H11B0.9700
C1—C31.499 (6)C12—C12i1.519 (9)
C2—C41.521 (5)C12—H12A0.9700
C3—C41.394 (6)C12—H12B0.9700
C3—C81.397 (6)
C10—N1—H1A109.5C7—C8—C3121.0 (4)
C10—N1—H1B109.5C7—C8—Cl4120.2 (4)
H1A—N1—H1B109.5C3—C8—Cl4118.8 (4)
C10—N1—H1C109.5O1—C9—H9A109.5
H1A—N1—H1C109.5O1—C9—H9B109.5
H1B—N1—H1C109.5H9A—C9—H9B109.5
C1—O1—C9116.3 (4)O1—C9—H9C109.5
O2—C1—O1123.7 (5)H9A—C9—H9C109.5
O2—C1—C3122.7 (4)H9B—C9—H9C109.5
O1—C1—C3113.6 (4)N1—C10—C11110.0 (4)
O3—C2—O4126.1 (4)N1—C10—H10A109.7
O3—C2—C4118.3 (4)C11—C10—H10A109.7
O4—C2—C4115.6 (4)N1—C10—H10B109.7
C4—C3—C8119.0 (4)C11—C10—H10B109.7
C4—C3—C1118.6 (4)H10A—C10—H10B108.2
C8—C3—C1122.2 (4)C12—C11—C10112.5 (4)
C5—C4—C3119.3 (4)C12—C11—H11A109.1
C5—C4—C2120.8 (4)C10—C11—H11A109.1
C3—C4—C2120.0 (4)C12—C11—H11B109.1
C4—C5—C6121.3 (4)C10—C11—H11B109.1
C4—C5—Cl1119.1 (3)H11A—C11—H11B107.8
C6—C5—Cl1119.6 (3)C11—C12—C12i113.0 (5)
C7—C6—C5119.4 (4)C11—C12—H12A109.0
C7—C6—Cl2120.7 (3)C12i—C12—H12A109.0
C5—C6—Cl2119.9 (4)C11—C12—H12B109.0
C6—C7—C8120.0 (4)C12i—C12—H12B109.0
C6—C7—Cl3119.9 (4)H12A—C12—H12B107.8
C8—C7—Cl3120.1 (4)
C9—O1—C1—O21.0 (9)C4—C5—C6—C71.5 (6)
C9—O1—C1—C3−179.9 (5)Cl1—C5—C6—C7−178.4 (3)
O2—C1—C3—C4−68.0 (7)C4—C5—C6—Cl2−177.0 (3)
O1—C1—C3—C4112.9 (5)Cl1—C5—C6—Cl23.1 (5)
O2—C1—C3—C8106.7 (6)C5—C6—C7—C82.3 (6)
O1—C1—C3—C8−72.4 (6)Cl2—C6—C7—C8−179.3 (3)
C8—C3—C4—C51.6 (6)C5—C6—C7—Cl3−176.7 (3)
C1—C3—C4—C5176.5 (4)Cl2—C6—C7—Cl31.7 (5)
C8—C3—C4—C2−176.8 (4)C6—C7—C8—C3−4.1 (7)
C1—C3—C4—C2−1.8 (5)Cl3—C7—C8—C3174.9 (3)
O3—C2—C4—C5101.7 (5)C6—C7—C8—Cl4177.5 (3)
O4—C2—C4—C5−79.0 (5)Cl3—C7—C8—Cl4−3.6 (5)
O3—C2—C4—C3−79.9 (5)C4—C3—C8—C72.1 (6)
O4—C2—C4—C399.4 (4)C1—C3—C8—C7−172.6 (4)
C3—C4—C5—C6−3.4 (6)C4—C3—C8—Cl4−179.4 (3)
C2—C4—C5—C6174.9 (4)C1—C3—C8—Cl45.9 (6)
C3—C4—C5—Cl1176.5 (3)N1—C10—C11—C12−178.2 (4)
C2—C4—C5—Cl1−5.2 (5)C10—C11—C12—C12i176.6 (5)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O40.891.902.770 (5)165
N1—H1B···O3ii0.891.872.757 (5)171
C9—H9B···Cl4iii0.962.753.677 (9)161
C10—H10B···O20.972.583.208 (7)122
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O40.891.902.770 (5)165
N1—H1B⋯O3i0.891.872.757 (5)171
C9—H9B⋯Cl4ii0.962.753.677 (9)161
C10—H10B⋯O20.972.583.208 (7)122

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Ethane-1,2-diaminium 3,4,5,6-tetra-bromo-2-(methoxy-carbon-yl)benzoate methanol solvate.

Authors:  Zu-Pei Liang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-22

3.  Ethanaminium 3,4,5,6-tetra-bromo-2-(meth-oxy-carbon-yl)benzoate methanol monosolvate.

Authors:  Jian Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-18
  3 in total
  1 in total

1.  Butane-1,4-diaminium bis-[3,4,5,6-tetra-chloro-2-(meth-oxy-carbon-yl)benzoate].

Authors:  Zu Pei Liang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-07
  1 in total

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