Literature DB >> 21754155

2-(4-Amino-phen-yl)-1-phenyl-diazenium 2,4,6-trinitro-phenolate.

Graham Smith, Urs D Wermuth, Jonathan M White.   

Abstract

In the title salt, C(12)H(12)N(3) (+)·C(6)H(2)N(3)O(7) (-), the diazenyl group of the 4-(phenyl-diazen-yl)aniline mol-ecule is protonated and forms a hydrogen bond with the phenolate O-atom acceptor of the picrate anion. Structure extension occurs through two symmetrical inter-ion three-centre amine N-H⋯O,O'(nitro) hydrogen-bonding associations [graph set R(1) (2)(4)], giving a convoluted two-dimensional network structure.

Entities:  

Year:  2011        PMID: 21754155      PMCID: PMC3099948          DOI: 10.1107/S1600536811008968

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the diazo-dye precursor aniline yellow [4-(phenyl­diazen­yl)aniline], see: O’Neil (2001 ▶). For structural data on diazenyl-protonated salts of aniline yellow, see: Yatsenko et al. (2000 ▶); Mahmoudkhani & Langer (2001a ▶); Smith et al. (2009 ▶). For amine-protonated salts of aniline yellow, see: Mahmoudkhani & Langer (2001b ▶); Smith et al. (2008 ▶). For hydrogen-bonding graph-set analysis, see: Etter et al. (1990 ▶).

Experimental

Crystal data

C12H12N3 +·C6H2N3O7 − M = 426.35 Monoclinic, a = 5.4506 (2) Å b = 16.8974 (5) Å c = 19.9386 (6) Å β = 94.063 (3)° V = 1831.75 (10) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 180 K 0.35 × 0.18 × 0.15 mm

Data collection

Oxford Diffraction Gemini-S CCD detector diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010 ▶) T min = 0.885, T max = 0.980 12224 measured reflections 3593 independent reflections 2278 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.075 S = 0.87 3593 reflections 292 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.14 e Å−3 Δρmin = −0.23 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶) within WinGX (Farrugia, 1999 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811008968/fl2338sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811008968/fl2338Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H12N3+·C6H2N3O7F(000) = 880
Mr = 426.35Dx = 1.546 Mg m3
Monoclinic, P21/nMelting point = 443–445 K
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 5.4506 (2) ÅCell parameters from 3903 reflections
b = 16.8974 (5) Åθ = 3.2–28.7°
c = 19.9386 (6) ŵ = 0.12 mm1
β = 94.063 (3)°T = 180 K
V = 1831.75 (10) Å3Prism, red-black
Z = 40.35 × 0.18 × 0.15 mm
Oxford Diffraction Gemini-S CCD detector diffractometer3593 independent reflections
Radiation source: fine-focus sealed tube2278 reflections with I > 2σ(I)
graphiteRint = 0.035
Detector resolution: 16.077 pixels mm-1θmax = 26.0°, θmin = 3.2°
ω scansh = −6→6
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010)k = −20→20
Tmin = 0.885, Tmax = 0.980l = −22→24
12224 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.075H atoms treated by a mixture of independent and constrained refinement
S = 0.87w = 1/[σ2(Fo2) + (0.0376P)2] where P = (Fo2 + 2Fc2)/3
3593 reflections(Δ/σ)max < 0.001
292 parametersΔρmax = 0.14 e Å3
0 restraintsΔρmin = −0.23 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.5298 (2)0.49802 (8)0.36091 (6)0.0251 (4)
N4−0.2497 (3)0.32118 (10)0.25985 (9)0.0344 (6)
N110.6596 (2)0.54559 (8)0.32635 (7)0.0252 (5)
C10.3432 (3)0.45678 (9)0.33086 (8)0.0222 (5)
C20.2730 (3)0.45249 (10)0.26070 (8)0.0269 (6)
C30.0809 (3)0.40706 (10)0.23773 (8)0.0276 (5)
C4−0.0594 (3)0.36418 (9)0.28318 (8)0.0238 (5)
C50.0074 (3)0.36874 (9)0.35319 (8)0.0254 (5)
C60.2047 (3)0.41246 (10)0.37563 (8)0.0264 (5)
C110.8581 (3)0.58730 (10)0.35919 (8)0.0242 (5)
C211.0003 (3)0.63434 (10)0.32020 (9)0.0296 (6)
C311.1992 (3)0.67474 (10)0.35069 (9)0.0343 (6)
C411.2563 (3)0.66787 (11)0.41880 (9)0.0385 (7)
C511.1132 (3)0.62021 (12)0.45732 (9)0.0410 (7)
C610.9138 (3)0.57997 (11)0.42795 (9)0.0336 (6)
O1A0.5381 (2)0.60880 (7)0.19268 (6)0.0355 (4)
O21A0.9876 (2)0.55846 (7)0.15684 (7)0.0441 (5)
O22A0.9183 (2)0.48046 (7)0.07170 (7)0.0434 (5)
O41A0.5231 (2)0.62072 (8)−0.12058 (6)0.0504 (5)
O42A0.2254 (2)0.70145 (8)−0.10480 (6)0.0402 (4)
O61A−0.0343 (2)0.74572 (7)0.11123 (7)0.0408 (5)
O62A0.2079 (2)0.72543 (7)0.20024 (6)0.0392 (5)
N2A0.8675 (2)0.53839 (9)0.10537 (8)0.0300 (5)
N4A0.3933 (3)0.65722 (9)−0.08305 (7)0.0330 (5)
N6A0.1562 (3)0.71719 (8)0.13953 (7)0.0299 (5)
C1A0.5121 (3)0.62347 (9)0.13155 (8)0.0239 (6)
C2A0.6597 (3)0.58734 (9)0.08148 (8)0.0238 (5)
C3A0.6232 (3)0.59705 (9)0.01357 (8)0.0250 (6)
C4A0.4368 (3)0.64710 (10)−0.01148 (8)0.0251 (5)
C5A0.2883 (3)0.68524 (10)0.03106 (8)0.0245 (5)
C6A0.3236 (3)0.67494 (9)0.09927 (8)0.0231 (5)
H20.360100.481200.230500.0320*
H30.039800.403800.191700.0330*
H5−0.084100.341800.383500.0300*
H60.250800.413500.421400.0320*
H110.626 (3)0.5560 (10)0.2835 (9)0.041 (6)*
H210.962500.638700.274100.0360*
H311.294900.706700.325000.0410*
H41−0.289 (3)0.3182 (12)0.2157 (11)0.061 (7)*
H42−0.337 (4)0.2946 (13)0.2877 (12)0.077 (8)*
H431.390300.695100.439000.0460*
H511.152400.615500.503300.0490*
H610.817700.548300.453800.0400*
H3A0.721600.57060−0.015400.0300*
H5A0.163100.718200.013500.0290*
U11U22U33U12U13U23
N10.0268 (7)0.0258 (8)0.0234 (8)0.0003 (7)0.0058 (6)0.0002 (6)
N40.0355 (9)0.0423 (10)0.0250 (10)−0.0121 (8)−0.0001 (8)0.0059 (8)
N110.0281 (8)0.0296 (8)0.0178 (8)−0.0013 (7)0.0017 (6)0.0019 (7)
C10.0235 (8)0.0239 (9)0.0195 (9)0.0015 (7)0.0027 (7)−0.0006 (7)
C20.0299 (9)0.0301 (10)0.0212 (10)−0.0019 (8)0.0050 (7)0.0056 (8)
C30.0306 (9)0.0336 (10)0.0183 (9)−0.0029 (8)0.0005 (7)0.0039 (8)
C40.0228 (8)0.0245 (9)0.0243 (9)0.0020 (8)0.0031 (7)0.0016 (7)
C50.0304 (9)0.0261 (9)0.0206 (9)−0.0019 (8)0.0080 (7)0.0029 (7)
C60.0333 (9)0.0287 (10)0.0174 (9)0.0033 (8)0.0041 (7)0.0003 (7)
C110.0252 (9)0.0253 (9)0.0222 (9)0.0004 (8)0.0020 (7)−0.0028 (8)
C210.0343 (10)0.0315 (10)0.0230 (10)0.0004 (8)0.0018 (8)0.0018 (8)
C310.0343 (10)0.0343 (11)0.0349 (11)−0.0081 (9)0.0059 (9)0.0008 (9)
C410.0359 (10)0.0438 (12)0.0352 (12)−0.0103 (9)−0.0008 (9)−0.0113 (9)
C510.0437 (11)0.0564 (13)0.0228 (10)−0.0103 (10)0.0018 (9)−0.0077 (9)
C610.0374 (10)0.0416 (11)0.0224 (10)−0.0081 (9)0.0073 (8)−0.0027 (9)
O1A0.0393 (7)0.0468 (8)0.0200 (7)−0.0047 (6)−0.0011 (5)0.0078 (6)
O21A0.0375 (7)0.0409 (8)0.0506 (9)−0.0030 (6)−0.0194 (7)0.0055 (7)
O22A0.0449 (8)0.0397 (8)0.0463 (9)0.0160 (7)0.0083 (7)−0.0007 (7)
O41A0.0556 (8)0.0749 (10)0.0222 (7)0.0169 (8)0.0133 (6)−0.0041 (7)
O42A0.0471 (8)0.0470 (8)0.0252 (7)0.0101 (7)−0.0069 (6)0.0066 (6)
O61A0.0296 (7)0.0452 (8)0.0484 (9)0.0091 (6)0.0075 (6)−0.0098 (7)
O62A0.0582 (8)0.0378 (8)0.0236 (8)−0.0076 (6)0.0163 (6)−0.0070 (6)
N2A0.0259 (8)0.0291 (9)0.0350 (9)−0.0019 (7)0.0013 (7)0.0069 (7)
N4A0.0368 (8)0.0425 (10)0.0200 (8)0.0007 (8)0.0040 (7)0.0005 (7)
N6A0.0347 (9)0.0266 (8)0.0297 (9)−0.0066 (7)0.0119 (7)−0.0060 (7)
C1A0.0241 (9)0.0270 (10)0.0204 (10)−0.0082 (7)0.0000 (7)0.0026 (7)
C2A0.0201 (8)0.0233 (9)0.0276 (10)−0.0005 (7)−0.0006 (7)0.0025 (8)
C3A0.0244 (9)0.0279 (10)0.0231 (10)0.0000 (8)0.0049 (7)−0.0041 (7)
C4A0.0278 (9)0.0308 (10)0.0169 (9)0.0006 (8)0.0025 (7)0.0009 (7)
C5A0.0236 (8)0.0256 (9)0.0242 (9)0.0035 (8)0.0004 (7)0.0016 (7)
C6A0.0231 (9)0.0252 (9)0.0216 (9)−0.0021 (7)0.0067 (7)−0.0040 (7)
O1A—C1A1.242 (2)C11—C211.387 (2)
O21A—N2A1.225 (2)C11—C611.389 (2)
O22A—N2A1.230 (2)C21—C311.385 (2)
O41A—N4A1.2312 (19)C31—C411.377 (3)
O42A—N4A1.236 (2)C41—C511.390 (3)
O61A—N6A1.2434 (19)C51—C611.377 (2)
O62A—N6A1.2311 (18)C2—H20.9300
N1—C11.339 (2)C3—H30.9300
N1—N111.3002 (18)C5—H50.9300
N4—C41.324 (2)C6—H60.9300
N11—C111.413 (2)C21—H210.9300
N4—H410.89 (2)C31—H310.9300
N4—H420.88 (2)C41—H430.9300
N11—H110.879 (18)C51—H510.9300
N2A—C2A1.455 (2)C61—H610.9300
N4A—C4A1.440 (2)C1A—C2A1.460 (2)
N6A—C6A1.446 (2)C1A—C6A1.460 (2)
C1—C61.422 (2)C2A—C3A1.365 (2)
C1—C21.426 (2)C3A—C4A1.388 (2)
C2—C31.352 (2)C4A—C5A1.374 (2)
C3—C41.425 (2)C5A—C6A1.371 (2)
C4—C51.420 (2)C3A—H3A0.9300
C5—C61.354 (2)C5A—H5A0.9300
N11—N1—C1120.61 (13)C3—C2—H2120.00
N1—N11—C11119.37 (13)C2—C3—H3120.00
C4—N4—H41120.3 (12)C4—C3—H3120.00
C4—N4—H42120.3 (15)C6—C5—H5120.00
H41—N4—H42119.4 (19)C4—C5—H5120.00
C11—N11—H11116.8 (11)C1—C6—H6119.00
N1—N11—H11123.7 (11)C5—C6—H6119.00
O21A—N2A—O22A123.37 (13)C11—C21—H21120.00
O21A—N2A—C2A118.30 (14)C31—C21—H21120.00
O22A—N2A—C2A118.29 (14)C41—C31—H31120.00
O42A—N4A—C4A119.03 (14)C21—C31—H31120.00
O41A—N4A—C4A118.78 (14)C51—C41—H43120.00
O41A—N4A—O42A122.19 (14)C31—C41—H43120.00
O61A—N6A—C6A118.63 (14)C41—C51—H51120.00
O61A—N6A—O62A121.87 (15)C61—C51—H51120.00
O62A—N6A—C6A119.49 (14)C51—C61—H61120.00
N1—C1—C6114.41 (14)C11—C61—H61120.00
N1—C1—C2127.45 (15)O1A—C1A—C2A123.89 (14)
C2—C1—C6118.13 (14)O1A—C1A—C6A125.39 (15)
C1—C2—C3120.59 (15)C2A—C1A—C6A110.63 (14)
C2—C3—C4120.74 (15)N2A—C2A—C1A117.89 (14)
C3—C4—C5119.09 (14)N2A—C2A—C3A116.65 (14)
N4—C4—C5121.03 (15)C1A—C2A—C3A125.44 (15)
N4—C4—C3119.89 (15)C2A—C3A—C4A118.82 (15)
C4—C5—C6119.79 (15)N4A—C4A—C3A119.61 (15)
C1—C6—C5121.61 (15)N4A—C4A—C5A119.56 (15)
N11—C11—C21117.80 (14)C3A—C4A—C5A120.81 (15)
C21—C11—C61120.86 (16)C4A—C5A—C6A120.36 (15)
N11—C11—C61121.32 (15)N6A—C6A—C1A120.09 (14)
C11—C21—C31119.20 (16)N6A—C6A—C5A116.00 (14)
C21—C31—C41120.45 (16)C1A—C6A—C5A123.90 (15)
C31—C41—C51119.84 (16)C2A—C3A—H3A121.00
C41—C51—C61120.53 (17)C4A—C3A—H3A121.00
C11—C61—C51119.12 (16)C4A—C5A—H5A120.00
C1—C2—H2120.00C6A—C5A—H5A120.00
C1—N1—N11—C11−178.90 (14)C4—C5—C6—C12.4 (2)
N11—N1—C1—C25.7 (2)N11—C11—C21—C31−178.72 (15)
N11—N1—C1—C6−174.89 (14)C61—C11—C21—C31−0.4 (3)
N1—N11—C11—C21176.74 (14)N11—C11—C61—C51178.27 (16)
N1—N11—C11—C61−1.6 (2)C21—C11—C61—C510.0 (3)
O21A—N2A—C2A—C1A−36.9 (2)C11—C21—C31—C410.5 (3)
O21A—N2A—C2A—C3A141.62 (15)C21—C31—C41—C51−0.1 (3)
O22A—N2A—C2A—C1A145.46 (15)C31—C41—C51—C61−0.3 (3)
O22A—N2A—C2A—C3A−36.1 (2)C41—C51—C61—C110.3 (3)
O41A—N4A—C4A—C5A−177.77 (16)O1A—C1A—C2A—N2A−7.4 (2)
O42A—N4A—C4A—C3A179.40 (15)O1A—C1A—C2A—C3A174.32 (16)
O41A—N4A—C4A—C3A0.2 (2)C6A—C1A—C2A—N2A175.85 (13)
O42A—N4A—C4A—C5A1.4 (2)C6A—C1A—C2A—C3A−2.5 (2)
O61A—N6A—C6A—C1A−163.87 (14)O1A—C1A—C6A—N6A3.5 (2)
O61A—N6A—C6A—C5A14.6 (2)O1A—C1A—C6A—C5A−174.90 (16)
O62A—N6A—C6A—C5A−163.83 (15)C2A—C1A—C6A—N6A−179.79 (14)
O62A—N6A—C6A—C1A17.7 (2)C2A—C1A—C6A—C5A1.8 (2)
C6—C1—C2—C3−0.4 (2)N2A—C2A—C3A—C4A−176.08 (14)
N1—C1—C6—C5178.82 (15)C1A—C2A—C3A—C4A2.3 (2)
N1—C1—C2—C3179.05 (16)C2A—C3A—C4A—N4A−179.13 (15)
C2—C1—C6—C5−1.7 (2)C2A—C3A—C4A—C5A−1.2 (2)
C1—C2—C3—C41.7 (3)N4A—C4A—C5A—C6A178.58 (15)
C2—C3—C4—N4178.74 (16)C3A—C4A—C5A—C6A0.6 (3)
C2—C3—C4—C5−1.0 (2)C4A—C5A—C6A—N6A−179.50 (15)
C3—C4—C5—C6−1.1 (2)C4A—C5A—C6A—C1A−1.1 (3)
N4—C4—C5—C6179.24 (16)
D—H···AD—HH···AD···AD—H···A
N11—H11···O1A0.879 (18)2.045 (18)2.9039 (18)165.4 (16)
N4—H41···O41Ai0.89 (2)2.44 (2)3.211 (2)145.0 (16)
N4—H41···O42Ai0.89 (2)2.29 (2)3.127 (2)156.9 (15)
N4—H42···O61Aii0.88 (2)2.33 (2)3.170 (2)159 (2)
N4—H42···O62Aii0.88 (2)2.36 (2)3.126 (2)145 (2)
C2—H2···O1A0.932.503.344 (2)151
C3A—H3A···O22Aiii0.932.483.384 (2)163
C5A—H5A···O61A0.932.342.663 (2)100
C21—H21···O62Aiv0.932.533.123 (2)122
C31—H31···O62Aiv0.932.523.123 (2)123
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N11—H11⋯O1A0.879 (18)2.045 (18)2.9039 (18)165.4 (16)
N4—H41⋯O41Ai0.89 (2)2.44 (2)3.211 (2)145.0 (16)
N4—H41⋯O42Ai0.89 (2)2.29 (2)3.127 (2)156.9 (15)
N4—H42⋯O61Aii0.88 (2)2.33 (2)3.170 (2)159 (2)
N4—H42⋯O62Aii0.88 (2)2.36 (2)3.126 (2)145 (2)

Symmetry codes: (i) ; (ii) .

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Authors:  Graham Smith; Urs D Wermuth; David J Young; Jonathan M White
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5.  The 1:1 proton-transfer compounds of 4-(phenyldiazenyl)aniline (aniline yellow) with 3-nitrophthalic, 4-nitrophthalic and 5-nitroisophthalic acids.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-23
  1 in total

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