| Literature DB >> 21754075 |
Abel M Maharramov, Ali N Khalilov, Atash V Gurbanov, Mirze A Allahverdiyev, Seik Weng Ng.
Abstract
The methyl-amino-propyl chain in the title compound, C(13)H(21)NO, adopts an extended zigzag conformation and the N atom shows a trigonal coordination. The N atom acts as hydrogen-bond acceptor to the hy-droxy group of an adjacent mol-ecule, generating a helical chain running along the b axis. The amino H atom is not involved in hydrogen bonding.Entities:
Year: 2011 PMID: 21754075 PMCID: PMC3099974 DOI: 10.1107/S1600536811007513
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H21NO | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4648 reflections |
| θ = 2.8–28.3° | |
| µ = 0.07 mm−1 | |
| β = 91.371 (1)° | Block, colorless |
| 0.30 × 0.20 × 0.20 mm | |
| Bruker APEXII diffractometer | 2384 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 27.5°, θmin = 2.8° |
| φ and ω scans | |
| 9964 measured reflections | |
| 2775 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2775 reflections | (Δ/σ)max = 0.001 |
| 148 parameters | Δρmax = 0.29 e Å−3 |
| 2 restraints | Δρmin = −0.15 e Å−3 |
| O1 | 0.40834 (5) | 0.62853 (13) | 0.68021 (5) | 0.02485 (19) | |
| H1 | 0.4176 (12) | 0.690 (3) | 0.7345 (8) | 0.054 (5)* | |
| N1 | 0.54856 (6) | 0.29883 (16) | 0.64351 (6) | 0.0236 (2) | |
| H2 | 0.5558 (9) | 0.4495 (15) | 0.6437 (9) | 0.032 (4)* | |
| C1 | 0.60577 (8) | 0.1994 (2) | 0.57080 (8) | 0.0292 (3) | |
| H1A | 0.6715 | 0.2278 | 0.5856 | 0.044* | |
| H1B | 0.5893 | 0.2709 | 0.5112 | 0.044* | |
| H1C | 0.5947 | 0.0334 | 0.5671 | 0.044* | |
| C2 | 0.44967 (7) | 0.25622 (18) | 0.62563 (7) | 0.0240 (2) | |
| H2A | 0.4369 | 0.0898 | 0.6320 | 0.029* | |
| H2B | 0.4332 | 0.3018 | 0.5613 | 0.029* | |
| C3 | 0.39001 (7) | 0.38978 (18) | 0.69225 (7) | 0.0222 (2) | |
| H3 | 0.4073 | 0.3446 | 0.7572 | 0.027* | |
| C4 | 0.28756 (7) | 0.3311 (2) | 0.67318 (8) | 0.0265 (2) | |
| H4A | 0.2725 | 0.3660 | 0.6075 | 0.032* | |
| H4B | 0.2792 | 0.1636 | 0.6820 | 0.032* | |
| C5 | 0.21865 (7) | 0.45598 (19) | 0.73277 (7) | 0.0233 (2) | |
| C6 | 0.19897 (7) | 0.37481 (19) | 0.82164 (7) | 0.0246 (2) | |
| C7 | 0.13219 (7) | 0.4868 (2) | 0.87371 (7) | 0.0260 (2) | |
| H7 | 0.1190 | 0.4302 | 0.9337 | 0.031* | |
| C8 | 0.08455 (7) | 0.6778 (2) | 0.84056 (8) | 0.0261 (2) | |
| C9 | 0.10519 (8) | 0.75788 (19) | 0.75269 (8) | 0.0266 (2) | |
| H9 | 0.0734 | 0.8891 | 0.7289 | 0.032* | |
| C10 | 0.17130 (7) | 0.65081 (19) | 0.69854 (7) | 0.0246 (2) | |
| C11 | 0.18859 (9) | 0.7448 (2) | 0.60308 (8) | 0.0316 (3) | |
| H11A | 0.1554 | 0.8907 | 0.5949 | 0.047* | |
| H11B | 0.1664 | 0.6344 | 0.5564 | 0.047* | |
| H11C | 0.2553 | 0.7704 | 0.5960 | 0.047* | |
| C12 | 0.01217 (8) | 0.7968 (2) | 0.89726 (9) | 0.0340 (3) | |
| H12A | 0.0111 | 0.7277 | 0.9591 | 0.051* | |
| H12B | −0.0489 | 0.7795 | 0.8668 | 0.051* | |
| H12C | 0.0274 | 0.9606 | 0.9028 | 0.051* | |
| C13 | 0.24826 (8) | 0.1699 (2) | 0.86386 (8) | 0.0303 (3) | |
| H13A | 0.2144 | 0.1166 | 0.9179 | 0.045* | |
| H13B | 0.3115 | 0.2139 | 0.8831 | 0.045* | |
| H13C | 0.2509 | 0.0459 | 0.8180 | 0.045* |
| O1 | 0.0301 (4) | 0.0223 (4) | 0.0221 (4) | −0.0012 (3) | −0.0007 (3) | −0.0008 (3) |
| N1 | 0.0252 (5) | 0.0231 (5) | 0.0225 (4) | 0.0006 (4) | 0.0033 (3) | −0.0003 (3) |
| C1 | 0.0308 (6) | 0.0302 (6) | 0.0268 (5) | 0.0043 (5) | 0.0060 (4) | −0.0012 (4) |
| C2 | 0.0263 (5) | 0.0241 (5) | 0.0217 (5) | 0.0004 (4) | 0.0004 (4) | −0.0024 (4) |
| C3 | 0.0242 (5) | 0.0218 (5) | 0.0206 (5) | −0.0002 (4) | 0.0000 (4) | −0.0008 (4) |
| C4 | 0.0254 (5) | 0.0274 (5) | 0.0267 (5) | −0.0013 (4) | −0.0003 (4) | −0.0061 (4) |
| C5 | 0.0199 (5) | 0.0254 (5) | 0.0245 (5) | −0.0033 (4) | −0.0018 (4) | −0.0045 (4) |
| C6 | 0.0211 (5) | 0.0252 (5) | 0.0273 (5) | −0.0039 (4) | −0.0028 (4) | −0.0009 (4) |
| C7 | 0.0222 (5) | 0.0323 (6) | 0.0235 (5) | −0.0045 (4) | −0.0001 (4) | 0.0000 (4) |
| C8 | 0.0197 (5) | 0.0316 (6) | 0.0270 (5) | −0.0020 (4) | −0.0011 (4) | −0.0060 (4) |
| C9 | 0.0237 (5) | 0.0278 (5) | 0.0282 (5) | 0.0013 (4) | −0.0045 (4) | −0.0011 (4) |
| C10 | 0.0236 (5) | 0.0280 (5) | 0.0221 (5) | −0.0029 (4) | −0.0033 (4) | −0.0027 (4) |
| C11 | 0.0339 (6) | 0.0369 (6) | 0.0240 (5) | 0.0013 (5) | −0.0023 (4) | 0.0015 (5) |
| C12 | 0.0267 (6) | 0.0412 (7) | 0.0342 (6) | 0.0045 (5) | 0.0030 (5) | −0.0061 (5) |
| C13 | 0.0285 (6) | 0.0284 (6) | 0.0339 (6) | −0.0016 (4) | −0.0003 (5) | 0.0047 (5) |
| O1—C3 | 1.4247 (13) | C6—C7 | 1.3966 (15) |
| O1—H1 | 0.870 (9) | C6—C13 | 1.5087 (16) |
| N1—C2 | 1.4632 (14) | C7—C8 | 1.3854 (16) |
| N1—C1 | 1.4693 (14) | C7—H7 | 0.9500 |
| N1—H2 | 0.882 (9) | C8—C9 | 1.3912 (16) |
| C1—H1A | 0.9800 | C8—C12 | 1.5094 (15) |
| C1—H1B | 0.9800 | C9—C10 | 1.3939 (15) |
| C1—H1C | 0.9800 | C9—H9 | 0.9500 |
| C2—C3 | 1.5193 (14) | C10—C11 | 1.5100 (15) |
| C2—H2A | 0.9900 | C11—H11A | 0.9800 |
| C2—H2B | 0.9900 | C11—H11B | 0.9800 |
| C3—C4 | 1.5334 (14) | C11—H11C | 0.9800 |
| C3—H3 | 1.0000 | C12—H12A | 0.9800 |
| C4—C5 | 1.5149 (15) | C12—H12B | 0.9800 |
| C4—H4A | 0.9900 | C12—H12C | 0.9800 |
| C4—H4B | 0.9900 | C13—H13A | 0.9800 |
| C5—C6 | 1.4036 (15) | C13—H13B | 0.9800 |
| C5—C10 | 1.4062 (15) | C13—H13C | 0.9800 |
| C3—O1—H1 | 108.4 (11) | C7—C6—C13 | 118.31 (10) |
| C2—N1—C1 | 111.57 (9) | C5—C6—C13 | 122.15 (10) |
| C2—N1—H2 | 106.4 (9) | C8—C7—C6 | 121.98 (10) |
| C1—N1—H2 | 109.0 (9) | C8—C7—H7 | 119.0 |
| N1—C1—H1A | 109.5 | C6—C7—H7 | 119.0 |
| N1—C1—H1B | 109.5 | C7—C8—C9 | 117.96 (10) |
| H1A—C1—H1B | 109.5 | C7—C8—C12 | 121.53 (10) |
| N1—C1—H1C | 109.5 | C9—C8—C12 | 120.51 (11) |
| H1A—C1—H1C | 109.5 | C8—C9—C10 | 121.79 (10) |
| H1B—C1—H1C | 109.5 | C8—C9—H9 | 119.1 |
| N1—C2—C3 | 111.40 (8) | C10—C9—H9 | 119.1 |
| N1—C2—H2A | 109.3 | C9—C10—C5 | 119.65 (10) |
| C3—C2—H2A | 109.3 | C9—C10—C11 | 118.75 (10) |
| N1—C2—H2B | 109.3 | C5—C10—C11 | 121.59 (10) |
| C3—C2—H2B | 109.3 | C10—C11—H11A | 109.5 |
| H2A—C2—H2B | 108.0 | C10—C11—H11B | 109.5 |
| O1—C3—C2 | 108.14 (8) | H11A—C11—H11B | 109.5 |
| O1—C3—C4 | 112.04 (9) | C10—C11—H11C | 109.5 |
| C2—C3—C4 | 109.23 (8) | H11A—C11—H11C | 109.5 |
| O1—C3—H3 | 109.1 | H11B—C11—H11C | 109.5 |
| C2—C3—H3 | 109.1 | C8—C12—H12A | 109.5 |
| C4—C3—H3 | 109.1 | C8—C12—H12B | 109.5 |
| C5—C4—C3 | 115.63 (9) | H12A—C12—H12B | 109.5 |
| C5—C4—H4A | 108.4 | C8—C12—H12C | 109.5 |
| C3—C4—H4A | 108.4 | H12A—C12—H12C | 109.5 |
| C5—C4—H4B | 108.4 | H12B—C12—H12C | 109.5 |
| C3—C4—H4B | 108.4 | C6—C13—H13A | 109.5 |
| H4A—C4—H4B | 107.4 | C6—C13—H13B | 109.5 |
| C6—C5—C10 | 119.07 (10) | H13A—C13—H13B | 109.5 |
| C6—C5—C4 | 120.56 (10) | C6—C13—H13C | 109.5 |
| C10—C5—C4 | 120.34 (10) | H13A—C13—H13C | 109.5 |
| C7—C6—C5 | 119.54 (10) | H13B—C13—H13C | 109.5 |
| C1—N1—C2—C3 | −171.17 (9) | C13—C6—C7—C8 | 179.21 (10) |
| N1—C2—C3—O1 | 60.20 (11) | C6—C7—C8—C9 | −0.18 (16) |
| N1—C2—C3—C4 | −177.63 (9) | C6—C7—C8—C12 | 179.70 (10) |
| O1—C3—C4—C5 | −58.72 (12) | C7—C8—C9—C10 | 0.23 (16) |
| C2—C3—C4—C5 | −178.53 (9) | C12—C8—C9—C10 | −179.64 (10) |
| C3—C4—C5—C6 | −82.99 (12) | C8—C9—C10—C5 | 0.23 (16) |
| C3—C4—C5—C10 | 99.05 (12) | C8—C9—C10—C11 | 178.81 (10) |
| C10—C5—C6—C7 | 0.81 (15) | C6—C5—C10—C9 | −0.75 (15) |
| C4—C5—C6—C7 | −177.18 (9) | C4—C5—C10—C9 | 177.24 (9) |
| C10—C5—C6—C13 | −178.73 (10) | C6—C5—C10—C11 | −179.29 (10) |
| C4—C5—C6—C13 | 3.28 (15) | C4—C5—C10—C11 | −1.30 (15) |
| C5—C6—C7—C8 | −0.35 (16) |
| H··· | ||||
| O1—H1···N1i | 0.87 (1) | 1.93 (1) | 2.789 (1) | 173 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯N1i | 0.87 (1) | 1.93 (1) | 2.789 (1) | 173 (2) |
Symmetry code: (i) .