Literature DB >> 21754023

1-Cyclo-hexyl-sulfinyl-2-methyl-naphtho-[2,1-b]furan.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(19)H(20)O(2)S, the cyclo-hexyl ring adopts a chair conformation and the aryl-sulfinyl unit is positioned equatorial relative to the cyclo-hexyl group. In the crystal, mol-ecules are linked through weak inter-molecular C-H⋯O hydrogen bonds. The O atom of the sulfinyl group is disordered over two orientations with site-occupancy factors of 0.923 (3) and 0.077 (3).

Entities:  

Year:  2011        PMID: 21754023      PMCID: PMC3100045          DOI: 10.1107/S1600536811010981

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological activity of naphtho­furan compounds, see: Einhorn et al. (1984 ▶); Hranjec et al. (2003 ▶); Mahadevan & Vaidya (2003 ▶). For structural studies of related 2-methyl­naphtho­[2,1-b]furan derivatives, see: Choi et al. (2006 ▶, 2007 ▶).

Experimental

Crystal data

C19H20O2S M = 312.41 Monoclinic, a = 5.8424 (1) Å b = 19.5900 (3) Å c = 13.4314 (2) Å β = 92.649 (1)° V = 1535.62 (4) Å3 Z = 4 Mo Kα radiation μ = 0.22 mm−1 T = 173 K 0.42 × 0.34 × 0.26 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.916, T max = 0.946 14260 measured reflections 3527 independent reflections 3026 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.104 S = 1.06 3527 reflections 210 parameters 4 restraints H-atom parameters constrained Δρmax = 0.56 e Å−3 Δρmin = −0.49 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811010981/fl2340sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811010981/fl2340Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H20O2SF(000) = 664
Mr = 312.41Dx = 1.351 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 6431 reflections
a = 5.8424 (1) Åθ = 2.6–27.5°
b = 19.5900 (3) ŵ = 0.22 mm1
c = 13.4314 (2) ÅT = 173 K
β = 92.649 (1)°Block, colourless
V = 1535.62 (4) Å30.42 × 0.34 × 0.26 mm
Z = 4
Bruker SMART APEXII CCD diffractometer3527 independent reflections
Radiation source: rotating anode3026 reflections with I > 2σ(I)
graphite multilayerRint = 0.037
Detector resolution: 10.0 pixels mm-1θmax = 27.5°, θmin = 1.8°
φ and ω scansh = −7→7
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −21→25
Tmin = 0.916, Tmax = 0.946l = −17→13
14260 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: difference Fourier map
wR(F2) = 0.104H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0439P)2 + 0.6943P] where P = (Fo2 + 2Fc2)/3
3527 reflections(Δ/σ)max = 0.001
210 parametersΔρmax = 0.56 e Å3
4 restraintsΔρmin = −0.49 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
S10.41951 (7)0.69277 (2)0.70702 (3)0.02494 (12)
O10.37126 (19)0.80010 (6)0.45636 (8)0.0279 (3)
O2A0.1985 (2)0.65645 (7)0.69667 (10)0.0324 (4)0.923 (3)
O2B0.428 (3)0.7216 (7)0.8085 (4)0.032 (4)0.077 (3)
C10.4458 (3)0.74856 (8)0.60361 (11)0.0217 (3)
C20.6184 (3)0.80058 (8)0.59149 (11)0.0223 (3)
C30.8144 (3)0.82508 (8)0.64850 (12)0.0240 (3)
C40.8863 (3)0.80032 (9)0.74330 (12)0.0275 (4)
H40.80020.76560.77380.033*
C51.0795 (3)0.82587 (10)0.79219 (13)0.0349 (4)
H51.12640.80850.85590.042*
C61.2078 (3)0.87735 (10)0.74869 (15)0.0394 (5)
H61.34100.89470.78310.047*
C71.1428 (3)0.90261 (9)0.65739 (15)0.0363 (4)
H71.23160.93750.62880.044*
C80.9452 (3)0.87778 (8)0.60411 (13)0.0287 (4)
C90.8795 (3)0.90357 (9)0.50783 (14)0.0346 (4)
H90.97060.93810.47960.042*
C100.6905 (3)0.88046 (9)0.45488 (14)0.0338 (4)
H100.64700.89810.39090.041*
C110.5645 (3)0.82935 (8)0.49987 (12)0.0261 (3)
C120.3020 (3)0.75066 (8)0.52147 (12)0.0245 (3)
C130.0955 (3)0.71211 (9)0.48597 (13)0.0312 (4)
H13A0.13760.67910.43510.047*
H13B−0.01900.74390.45720.047*
H13C0.03150.68780.54210.047*
C140.6408 (3)0.63113 (8)0.67666 (11)0.0218 (3)
H140.79190.65520.67730.026*
C150.5947 (3)0.59934 (8)0.57445 (12)0.0266 (3)
H15A0.60370.63500.52260.032*
H15B0.43810.57990.57020.032*
C160.7685 (3)0.54320 (9)0.55551 (13)0.0298 (4)
H16A0.73050.52170.49010.036*
H16B0.92320.56350.55300.036*
C170.7697 (3)0.48904 (9)0.63642 (14)0.0337 (4)
H17A0.88680.45410.62320.040*
H17B0.61840.46630.63590.040*
C180.8223 (3)0.52122 (9)0.73821 (13)0.0331 (4)
H18A0.97860.54080.74030.040*
H18B0.81750.48560.79040.040*
C190.6489 (3)0.57741 (9)0.75944 (12)0.0294 (4)
H19A0.49500.55690.76470.035*
H19B0.69200.59950.82390.035*
U11U22U33U12U13U23
S10.0245 (2)0.0235 (2)0.0274 (2)0.00162 (15)0.00739 (15)0.00115 (15)
O10.0266 (6)0.0291 (6)0.0277 (6)0.0003 (5)−0.0021 (5)0.0036 (5)
O2A0.0207 (7)0.0343 (8)0.0425 (8)−0.0019 (5)0.0062 (5)0.0037 (6)
O2B0.030 (8)0.022 (8)0.045 (7)0.003 (6)0.003 (6)0.014 (6)
C10.0208 (7)0.0193 (7)0.0251 (7)0.0015 (6)0.0029 (6)−0.0013 (6)
C20.0225 (7)0.0188 (7)0.0259 (7)0.0019 (6)0.0042 (6)−0.0017 (6)
C30.0224 (8)0.0200 (7)0.0297 (8)0.0003 (6)0.0039 (6)−0.0065 (6)
C40.0264 (8)0.0275 (8)0.0287 (8)−0.0014 (7)0.0018 (6)−0.0066 (6)
C50.0320 (9)0.0392 (10)0.0331 (9)0.0013 (8)−0.0027 (7)−0.0119 (8)
C60.0266 (9)0.0409 (11)0.0504 (11)−0.0073 (8)−0.0003 (8)−0.0200 (9)
C70.0291 (9)0.0293 (9)0.0510 (11)−0.0079 (7)0.0080 (8)−0.0116 (8)
C80.0272 (8)0.0211 (8)0.0384 (9)−0.0012 (7)0.0078 (7)−0.0060 (7)
C90.0369 (10)0.0245 (9)0.0434 (10)−0.0058 (7)0.0112 (8)0.0024 (7)
C100.0381 (10)0.0280 (9)0.0356 (9)0.0004 (7)0.0058 (8)0.0076 (7)
C110.0245 (8)0.0242 (8)0.0297 (8)0.0014 (6)0.0018 (6)−0.0004 (6)
C120.0235 (8)0.0229 (8)0.0274 (8)0.0024 (6)0.0033 (6)−0.0010 (6)
C130.0258 (8)0.0359 (10)0.0315 (9)−0.0028 (7)−0.0015 (7)−0.0034 (7)
C140.0192 (7)0.0203 (7)0.0260 (7)0.0001 (6)0.0020 (6)−0.0012 (6)
C150.0295 (8)0.0243 (8)0.0260 (8)0.0041 (7)−0.0007 (6)−0.0015 (6)
C160.0317 (9)0.0251 (8)0.0327 (9)0.0044 (7)0.0023 (7)−0.0043 (7)
C170.0328 (9)0.0227 (8)0.0454 (10)0.0048 (7)0.0009 (8)0.0005 (7)
C180.0338 (9)0.0292 (9)0.0362 (9)0.0051 (7)−0.0013 (7)0.0074 (7)
C190.0314 (9)0.0289 (9)0.0279 (8)0.0019 (7)0.0023 (7)0.0034 (7)
S1—O2B1.4741 (16)C10—C111.397 (2)
S1—O2A1.4752 (13)C10—H100.9500
S1—C11.7796 (16)C12—C131.483 (2)
S1—C141.8287 (15)C13—H13A0.9800
O1—C111.372 (2)C13—H13B0.9800
O1—C121.3782 (19)C13—H13C0.9800
C1—C121.356 (2)C14—C151.520 (2)
C1—C21.448 (2)C14—C191.530 (2)
C2—C111.377 (2)C14—H141.0000
C2—C31.431 (2)C15—C161.526 (2)
C3—C41.408 (2)C15—H15A0.9900
C3—C81.431 (2)C15—H15B0.9900
C4—C51.374 (2)C16—C171.519 (2)
C4—H40.9500C16—H16A0.9900
C5—C61.400 (3)C16—H16B0.9900
C5—H50.9500C17—C181.524 (3)
C6—C71.360 (3)C17—H17A0.9900
C6—H60.9500C17—H17B0.9900
C7—C81.416 (2)C18—C191.532 (2)
C7—H70.9500C18—H18A0.9900
C8—C91.424 (3)C18—H18B0.9900
C9—C101.363 (3)C19—H19A0.9900
C9—H90.9500C19—H19B0.9900
O2B—S1—O2A105.2 (6)C12—C13—H13A109.5
O2B—S1—C1119.1 (6)C12—C13—H13B109.5
O2A—S1—C1109.24 (8)H13A—C13—H13B109.5
O2B—S1—C14117.8 (6)C12—C13—H13C109.5
O2A—S1—C14106.57 (7)H13A—C13—H13C109.5
C1—S1—C1498.29 (7)H13B—C13—H13C109.5
C11—O1—C12106.44 (12)C15—C14—C19111.88 (13)
C12—C1—C2107.20 (14)C15—C14—S1111.98 (11)
C12—C1—S1125.51 (12)C19—C14—S1106.89 (10)
C2—C1—S1127.28 (12)C15—C14—H14108.7
C11—C2—C3119.04 (14)C19—C14—H14108.7
C11—C2—C1104.89 (14)S1—C14—H14108.7
C3—C2—C1136.07 (15)C14—C15—C16110.75 (13)
C4—C3—C2124.48 (15)C14—C15—H15A109.5
C4—C3—C8118.85 (15)C16—C15—H15A109.5
C2—C3—C8116.67 (15)C14—C15—H15B109.5
C5—C4—C3120.71 (16)C16—C15—H15B109.5
C5—C4—H4119.6H15A—C15—H15B108.1
C3—C4—H4119.6C17—C16—C15111.43 (14)
C4—C5—C6120.46 (18)C17—C16—H16A109.3
C4—C5—H5119.8C15—C16—H16A109.3
C6—C5—H5119.8C17—C16—H16B109.3
C7—C6—C5120.37 (17)C15—C16—H16B109.3
C7—C6—H6119.8H16A—C16—H16B108.0
C5—C6—H6119.8C16—C17—C18110.31 (14)
C6—C7—C8121.19 (17)C16—C17—H17A109.6
C6—C7—H7119.4C18—C17—H17A109.6
C8—C7—H7119.4C16—C17—H17B109.6
C7—C8—C9121.08 (16)C18—C17—H17B109.6
C7—C8—C3118.42 (16)H17A—C17—H17B108.1
C9—C8—C3120.49 (16)C17—C18—C19110.89 (14)
C10—C9—C8122.26 (16)C17—C18—H18A109.5
C10—C9—H9118.9C19—C18—H18A109.5
C8—C9—H9118.9C17—C18—H18B109.5
C9—C10—C11116.30 (16)C19—C18—H18B109.5
C9—C10—H10121.9H18A—C18—H18B108.1
C11—C10—H10121.9C14—C19—C18110.95 (13)
O1—C11—C2111.06 (14)C14—C19—H19A109.5
O1—C11—C10123.70 (15)C18—C19—H19A109.5
C2—C11—C10125.22 (16)C14—C19—H19B109.5
C1—C12—O1110.39 (14)C18—C19—H19B109.5
C1—C12—C13135.26 (15)H19A—C19—H19B108.0
O1—C12—C13114.34 (14)
O2B—S1—C1—C12−129.3 (7)C12—O1—C11—C2−0.83 (17)
O2A—S1—C1—C12−8.48 (16)C12—O1—C11—C10177.79 (15)
C14—S1—C1—C12102.38 (15)C3—C2—C11—O1−179.51 (13)
O2B—S1—C1—C249.3 (7)C1—C2—C11—O11.20 (17)
O2A—S1—C1—C2170.18 (13)C3—C2—C11—C101.9 (2)
C14—S1—C1—C2−78.96 (14)C1—C2—C11—C10−177.40 (16)
C12—C1—C2—C11−1.11 (17)C9—C10—C11—O1−179.38 (15)
S1—C1—C2—C11−179.96 (12)C9—C10—C11—C2−1.0 (3)
C12—C1—C2—C3179.78 (17)C2—C1—C12—O10.64 (17)
S1—C1—C2—C30.9 (3)S1—C1—C12—O1179.53 (10)
C11—C2—C3—C4179.47 (15)C2—C1—C12—C13179.33 (17)
C1—C2—C3—C4−1.5 (3)S1—C1—C12—C13−1.8 (3)
C11—C2—C3—C8−1.3 (2)C11—O1—C12—C10.08 (17)
C1—C2—C3—C8177.71 (16)C11—O1—C12—C13−178.90 (13)
C2—C3—C4—C5178.74 (15)O2B—S1—C14—C15173.0 (7)
C8—C3—C4—C5−0.5 (2)O2A—S1—C14—C1555.20 (13)
C3—C4—C5—C60.3 (3)C1—S1—C14—C15−57.80 (12)
C4—C5—C6—C7−0.1 (3)O2B—S1—C14—C1950.1 (7)
C5—C6—C7—C80.0 (3)O2A—S1—C14—C19−67.66 (12)
C6—C7—C8—C9−179.00 (17)C1—S1—C14—C19179.35 (11)
C6—C7—C8—C3−0.1 (3)C19—C14—C15—C16−54.42 (18)
C4—C3—C8—C70.3 (2)S1—C14—C15—C16−174.40 (11)
C2—C3—C8—C7−178.92 (14)C14—C15—C16—C1756.20 (18)
C4—C3—C8—C9179.24 (15)C15—C16—C17—C18−57.71 (19)
C2—C3—C8—C90.0 (2)C16—C17—C18—C1957.25 (19)
C7—C8—C9—C10179.84 (17)C15—C14—C19—C1854.40 (18)
C3—C8—C9—C101.0 (3)S1—C14—C19—C18177.31 (12)
C8—C9—C10—C11−0.5 (3)C17—C18—C19—C14−55.59 (19)
D—H···AD—HH···AD···AD—H···A
C13—H13B···O2Bi0.982.122.848 (6)130
C14—H14···O2Aii1.002.383.2947 (19)152
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C13—H13B⋯O2Bi0.982.122.848 (6)130
C14—H14⋯O2Aii1.002.383.2947 (19)152

Symmetry codes: (i) ; (ii) .

  2 in total

1.  Synthesis and antitumor evaluation of some new substituted amidino-benzimidazolyl-furyl-phenyl-acrylates and naphtho[2,1-b]furan-carboxylates.

Authors:  M Hranjec; M Grdisa; K Pavelic; D W Boykin; G Karminski-Zamola
Journal:  Farmaco       Date:  2003-12

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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