Literature DB >> 21754016

Bis{2-[(2-furylmeth-yl)imino-meth-yl]-5-meth-oxy-phenolato-κN,O}zinc(II).

Chunyan Li1.   

Abstract

In the title complex, [Zn(C(13)H(12)NO(3))(2)], the Zn(II) ion is located on a twofold rotation axis and is coordinated by two bidentate Schiff base ligands in a distorted tetra-hedral environment. The complex mol-ecules are stacked in columns along the b axis through C-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 21754016      PMCID: PMC3099774          DOI: 10.1107/S1600536811011536

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity and applications of Zn(II) complexes, see: Csaszar et al. (1985 ▶); Greener et al. (1996 ▶); Gultneh et al. (1996 ▶); Aoki & Kimura (2004 ▶). For applications of furfuryl­amine derivatives, see: Camejo et al. (1992 ▶); Ledovskikh & Camejo (1993 ▶). For a related structure, see; Cai et al. (2010 ▶).

Experimental

Crystal data

[Zn(C13H12NO3)2] M = 525.84 Monoclinic, a = 27.210 (4) Å b = 5.2244 (7) Å c = 19.007 (3) Å β = 119.507 (2)° V = 2351.5 (5) Å3 Z = 4 Mo Kα radiation μ = 1.09 mm−1 T = 298 K 0.32 × 0.20 × 0.13 mm

Data collection

Bruker SMART CCD area detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.722, T max = 0.871 6855 measured reflections 2303 independent reflections 2062 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.128 S = 1.01 2303 reflections 160 parameters 1 restraint H-atom parameters constrained Δρmax = 0.64 e Å−3 Δρmin = −0.31 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811011536/is2670sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811011536/is2670Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C13H12NO3)2]F(000) = 1088
Mr = 525.84Dx = 1.485 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 2246 reflections
a = 27.210 (4) Åθ = 2.5–23.7°
b = 5.2244 (7) ŵ = 1.09 mm1
c = 19.007 (3) ÅT = 298 K
β = 119.507 (2)°Block, yellow
V = 2351.5 (5) Å30.32 × 0.20 × 0.13 mm
Z = 4
Bruker SMART CCD area detector diffractometer2303 independent reflections
Radiation source: fine-focus sealed tube2062 reflections with I > 2σ(I)
graphiteRint = 0.026
φ and ω scansθmax = 26.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −33→33
Tmin = 0.722, Tmax = 0.871k = −6→6
6855 measured reflectionsl = −23→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.128H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0784P)2 + 2.4971P] where P = (Fo2 + 2Fc2)/3
2303 reflections(Δ/σ)max < 0.001
160 parametersΔρmax = 0.64 e Å3
1 restraintΔρmin = −0.31 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.00000.78566 (12)0.25000.0427 (3)
N10.02638 (12)0.5960 (6)0.18435 (18)0.0394 (7)
O10.06578 (11)0.9989 (6)0.30670 (18)0.0549 (7)
O20.24426 (12)1.3537 (7)0.3745 (2)0.0665 (9)
O3−0.03914 (17)0.7542 (6)0.0242 (2)0.0729 (10)
C10.11535 (15)0.8329 (7)0.2413 (2)0.0403 (8)
C20.10942 (14)1.0010 (7)0.2954 (2)0.0402 (8)
C30.15270 (16)1.1795 (8)0.3399 (3)0.0465 (9)
H30.14901.29180.37500.056*
C40.20061 (16)1.1895 (8)0.3319 (3)0.0489 (9)
C50.20638 (16)1.0283 (9)0.2781 (3)0.0550 (10)
H50.23821.03850.27200.066*
C60.16505 (16)0.8560 (9)0.2348 (3)0.0505 (10)
H60.16940.74830.19930.061*
C70.2397 (2)1.5304 (9)0.4279 (3)0.0675 (13)
H7A0.20801.64110.39760.101*
H7B0.27361.63090.45450.101*
H7C0.23451.43860.46750.101*
C80.07515 (15)0.6467 (7)0.1911 (2)0.0417 (8)
H80.08510.54910.15910.050*
C9−0.00946 (17)0.4112 (8)0.1224 (2)0.0508 (9)
H9A−0.02600.29430.14460.061*
H9B0.01340.31180.10610.061*
C10−0.05497 (17)0.5418 (8)0.0510 (2)0.0517 (10)
C11−0.1095 (2)0.4911 (15)0.0025 (3)0.0929 (17)
H11−0.13030.35630.00650.111*
C12−0.1294 (3)0.6947 (16)−0.0583 (4)0.102 (2)
H12−0.16610.7157−0.10070.123*
C13−0.0861 (3)0.8419 (15)−0.0423 (3)0.103 (2)
H13−0.08740.9855−0.07210.123*
U11U22U33U12U13U23
Zn10.0333 (4)0.0510 (4)0.0525 (4)0.0000.0278 (3)0.000
N10.0346 (15)0.0452 (16)0.0426 (16)0.0013 (13)0.0222 (13)0.0020 (13)
O10.0396 (15)0.0674 (18)0.0709 (18)−0.0102 (13)0.0372 (14)−0.0200 (15)
O20.0414 (16)0.070 (2)0.083 (2)−0.0157 (14)0.0268 (16)−0.0085 (18)
O30.079 (2)0.070 (2)0.064 (2)0.0066 (17)0.0316 (19)0.0094 (16)
C10.0326 (18)0.047 (2)0.045 (2)0.0031 (15)0.0226 (16)0.0047 (16)
C20.0301 (17)0.0457 (19)0.047 (2)0.0029 (14)0.0205 (15)0.0023 (16)
C30.038 (2)0.047 (2)0.054 (2)−0.0002 (16)0.0232 (18)−0.0007 (17)
C40.0342 (19)0.052 (2)0.056 (2)−0.0027 (16)0.0188 (18)0.0068 (18)
C50.0336 (19)0.074 (3)0.066 (3)0.0003 (18)0.0304 (19)0.005 (2)
C60.037 (2)0.065 (3)0.057 (2)0.0034 (18)0.0289 (18)−0.002 (2)
C70.059 (3)0.060 (3)0.068 (3)−0.018 (2)0.019 (2)−0.003 (2)
C80.0398 (19)0.047 (2)0.044 (2)0.0051 (15)0.0252 (17)0.0000 (16)
C90.052 (2)0.045 (2)0.060 (2)−0.0084 (18)0.031 (2)−0.0046 (19)
C100.043 (2)0.065 (3)0.050 (2)−0.0058 (18)0.0245 (18)−0.014 (2)
C110.050 (3)0.155 (5)0.079 (3)−0.021 (3)0.036 (3)−0.049 (3)
C120.064 (4)0.167 (7)0.056 (3)0.042 (4)0.015 (3)−0.015 (3)
C130.119 (6)0.113 (5)0.055 (3)0.052 (5)0.027 (4)0.014 (3)
Zn1—O1i1.925 (3)C4—C51.391 (6)
Zn1—O11.925 (3)C5—C61.357 (6)
Zn1—N11.984 (3)C5—H50.9300
Zn1—N1i1.984 (3)C6—H60.9300
N1—C81.296 (4)C7—H7A0.9600
N1—C91.463 (5)C7—H7B0.9600
O1—C21.306 (4)C7—H7C0.9600
O2—C41.362 (5)C8—H80.9300
O2—C71.422 (6)C9—C101.479 (6)
O3—C131.360 (7)C9—H9A0.9700
O3—C101.375 (5)C9—H9B0.9700
C1—C21.422 (5)C10—C111.332 (6)
C1—C61.422 (5)C11—C121.465 (10)
C1—C81.423 (5)C11—H110.9300
C2—C31.411 (5)C12—C131.311 (11)
C3—C41.386 (6)C12—H120.9300
C3—H30.9300C13—H130.9300
O1i—Zn1—O1109.27 (18)C1—C6—H6118.6
O1i—Zn1—N1117.49 (12)O2—C7—H7A109.5
O1—Zn1—N196.69 (11)O2—C7—H7B109.5
O1i—Zn1—N1i96.69 (11)H7A—C7—H7B109.5
O1—Zn1—N1i117.49 (12)O2—C7—H7C109.5
N1—Zn1—N1i120.08 (18)H7A—C7—H7C109.5
C8—N1—C9117.3 (3)H7B—C7—H7C109.5
C8—N1—Zn1120.4 (3)N1—C8—C1128.1 (3)
C9—N1—Zn1122.1 (2)N1—C8—H8115.9
C2—O1—Zn1125.6 (2)C1—C8—H8115.9
C4—O2—C7118.4 (3)N1—C9—C10111.1 (3)
C13—O3—C10107.1 (5)N1—C9—H9A109.4
C2—C1—C6117.5 (3)C10—C9—H9A109.4
C2—C1—C8125.7 (3)N1—C9—H9B109.4
C6—C1—C8116.7 (3)C10—C9—H9B109.4
O1—C2—C3117.7 (3)H9A—C9—H9B108.0
O1—C2—C1123.4 (3)C11—C10—O3110.5 (5)
C3—C2—C1118.9 (3)C11—C10—C9133.4 (5)
C4—C3—C2120.8 (4)O3—C10—C9116.0 (4)
C4—C3—H3119.6C10—C11—C12104.7 (6)
C2—C3—H3119.6C10—C11—H11127.6
O2—C4—C3123.4 (4)C12—C11—H11127.6
O2—C4—C5115.9 (4)C13—C12—C11107.5 (5)
C3—C4—C5120.7 (4)C13—C12—H12126.2
C6—C5—C4119.2 (3)C11—C12—H12126.2
C6—C5—H5120.4C12—C13—O3110.1 (7)
C4—C5—H5120.4C12—C13—H13124.9
C5—C6—C1122.9 (4)O3—C13—H13124.9
C5—C6—H6118.6
D—H···AD—HH···AD···AD—H···A
C9—H9A···O1ii0.972.323.292 (6)177
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C9—H9A⋯O1i0.972.323.292 (6)177

Symmetry code: (i) .

  2 in total

Review 1.  Zinc-nucleic acid interaction.

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