Literature DB >> 21753964

Aqua-bromidobis(dimethyl-glyoximato)cobalt(III).

Parthasarathy Meera1, Madhavan Amutha Selvi, Pachaimuthu Jothi, Arunachalam Dayalan.   

Abstract

In the title complex, [CoBr(C(4)H(7)N(2)O(2))(2)(H(2)O)], a crystallo-graphic mirror plane bis-ects the mol-ecule, perpendicular to the glyoximate ligands. The geometry around the cobalt(III) atom is approximately octa-hedral with the four glyoximate N atoms forming the square base. A bromide ion and the O atom of a water mol-ecule occupy the remaining coordination sites. The N-Co-N bite angles are 82.18 (4) and 80.03 (16)°. The glyoximate moieties form strong intra-molecular O-H⋯O hydrogen bonds. The coordinated water mol-ecule forms an inter-molecular O-H⋯O hydrogen bond with a glyoximate O atom, thereby generating supra-molecular chains parallel to [010].

Entities:  

Year:  2011        PMID: 21753964      PMCID: PMC3099747          DOI: 10.1107/S1600536811008877

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related complexes, see: Ohkubo & Fukuzumi (2005 ▶); Randall & Alberty (1970 ▶); Schrauzer (1968 ▶); Trommel et al. (2001 ▶). For similar structures, see: Bernstein et al. (1995 ▶); Mégnamisi-Bélombé et al. (1983 ▶); Meera et al. (2009 ▶); Ramesh et al. (2008 ▶). For the preparation of similar complexes, see: Vijayraghavan & Dayalan (1992 ▶). For spectroscopic studies related to the title complex, see: Folgando et al. (1986 ▶); Khan et al. (1997 ▶); Lopez et al. (1986 ▶).

Experimental

Crystal data

[CoBr(C4H7N2O2)2(H2O)] M = 387.09 Monoclinic, a = 7.5903 (3) Å b = 8.8816 (4) Å c = 10.5343 (5) Å β = 96.137 (3)° V = 706.09 (5) Å3 Z = 2 Mo Kα radiation μ = 4.07 mm−1 T = 293 K 0.15 × 0.10 × 0.10 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker 1999 ▶) T min = 0.581, T max = 0.687 7395 measured reflections 1480 independent reflections 1298 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.096 S = 1.22 1480 reflections 101 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 1.01 e Å−3 Δρmin = −0.54 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2 and SAINT-Plus (Bruker, 2004 ▶); data reduction: SAINT-Plus and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2008) ▶; software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811008877/fj2399sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811008877/fj2399Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[CoBr(C4H7N2O2)2(H2O)]F(000) = 388
Mr = 387.09Dx = 1.821 Mg m3
Monoclinic, P21/mMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybCell parameters from 3745 reflections
a = 7.5903 (3) Åθ = 2.7–30.7°
b = 8.8816 (4) ŵ = 4.07 mm1
c = 10.5343 (5) ÅT = 293 K
β = 96.137 (3)°Block, brown
V = 706.09 (5) Å30.15 × 0.10 × 0.10 mm
Z = 2
Bruker Kappa APEXII CCD diffractometer1480 independent reflections
Radiation source: fine-focus sealed tube1298 reflections with I > 2σ(I)
graphiteRint = 0.028
ω and φ scansθmax = 26.0°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Bruker 1999)h = −9→9
Tmin = 0.581, Tmax = 0.687k = −10→9
7395 measured reflectionsl = −12→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.096H atoms treated by a mixture of independent and constrained refinement
S = 1.22w = 1/[σ2(Fo2) + (0.0564P)2 + 0.1583P] where P = (Fo2 + 2Fc2)/3
1480 reflections(Δ/σ)max = 0.001
101 parametersΔρmax = 1.01 e Å3
2 restraintsΔρmin = −0.54 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.7937 (4)0.3331 (3)0.5395 (3)0.0330 (6)
C20.8935 (4)0.4238 (4)0.6415 (3)0.0487 (8)
H2A0.88180.52880.62070.073*
H2B1.01640.39600.64860.073*
H2C0.84690.40520.72130.073*
C30.3600 (4)0.1669 (4)0.1163 (3)0.0448 (8)
C40.2476 (6)0.0761 (5)0.0221 (4)0.0726 (13)
H4A0.2737−0.02880.03580.109*
H4B0.27090.1038−0.06260.109*
H4C0.12500.09420.03180.109*
N10.6996 (3)0.3893 (2)0.4417 (2)0.0302 (5)
N20.4668 (3)0.1117 (3)0.2069 (2)0.0374 (6)
O10.6810 (3)0.5377 (2)0.4230 (2)0.0395 (5)
O20.4819 (3)−0.0402 (3)0.2186 (2)0.0501 (6)
O30.3771 (4)0.25000.4145 (3)0.0314 (6)
Co10.58731 (6)0.25000.32505 (5)0.02601 (18)
Br10.83644 (6)0.25000.20942 (4)0.04048 (18)
H20.557 (4)−0.051 (4)0.293 (2)0.059 (12)*
H30.366 (5)0.173 (3)0.460 (3)0.050 (10)*
U11U22U33U12U13U23
C10.0234 (13)0.0376 (16)0.0391 (15)−0.0028 (12)0.0091 (11)−0.0058 (12)
C20.0354 (17)0.060 (2)0.0503 (18)−0.0080 (15)0.0039 (14)−0.0164 (17)
C30.0321 (15)0.068 (2)0.0356 (16)−0.0038 (15)0.0097 (13)−0.0091 (15)
C40.054 (2)0.106 (4)0.056 (2)−0.018 (2)0.0022 (19)−0.030 (2)
N10.0284 (12)0.0230 (12)0.0415 (13)−0.0032 (9)0.0139 (10)−0.0029 (10)
N20.0327 (13)0.0388 (15)0.0430 (14)−0.0053 (11)0.0140 (11)−0.0082 (11)
O10.0446 (12)0.0229 (10)0.0538 (13)−0.0022 (9)0.0180 (10)−0.0031 (9)
O20.0540 (15)0.0376 (13)0.0604 (15)−0.0075 (11)0.0142 (12)−0.0163 (11)
O30.0300 (14)0.0259 (15)0.0401 (16)0.0000.0130 (12)0.000
Co10.0251 (3)0.0227 (3)0.0312 (3)0.0000.0076 (2)0.000
Br10.0364 (3)0.0432 (3)0.0441 (3)0.0000.01498 (19)0.000
C1—N11.289 (4)C4—H4C0.9600
C1—C1i1.476 (6)N1—O11.338 (3)
C1—C21.485 (4)N1—Co11.883 (2)
C2—H2A0.9600N2—O21.358 (3)
C2—H2B0.9600N2—Co11.911 (2)
C2—H2C0.9600O2—H20.921 (10)
C3—N21.283 (4)O3—Co11.938 (3)
C3—C3i1.475 (7)O3—H30.85 (3)
C3—C41.477 (4)Co1—N1i1.883 (2)
C4—H4A0.9600Co1—N2i1.911 (2)
C4—H4B0.9600Co1—Br12.3563 (6)
N1—C1—C1i112.79 (16)C3—N2—O2119.2 (3)
N1—C1—C2124.4 (3)C3—N2—Co1117.3 (2)
C1i—C1—C2122.85 (19)O2—N2—Co1123.3 (2)
C1—C2—H2A109.5N2—O2—H2103 (2)
C1—C2—H2B109.5Co1—O3—H3114 (3)
H2A—C2—H2B109.5N1—Co1—N1i82.18 (14)
C1—C2—H2C109.5N1—Co1—N2i98.88 (11)
H2A—C2—H2C109.5N1i—Co1—N2i178.29 (10)
H2B—C2—H2C109.5N1—Co1—N2178.29 (10)
N2—C3—C3i112.51 (19)N1i—Co1—N298.88 (11)
N2—C3—C4124.4 (4)N2i—Co1—N280.03 (16)
C3i—C3—C4123.1 (2)N1—Co1—O391.24 (9)
C3—C4—H4A109.5N1i—Co1—O391.24 (9)
C3—C4—H4B109.5N2i—Co1—O387.40 (10)
H4A—C4—H4B109.5N2—Co1—O387.40 (10)
C3—C4—H4C109.5N1—Co1—Br190.29 (7)
H4A—C4—H4C109.5N1i—Co1—Br190.29 (7)
H4B—C4—H4C109.5N2i—Co1—Br191.04 (7)
C1—N1—O1122.7 (2)N2—Co1—Br191.04 (7)
C1—N1—Co1116.1 (2)O3—Co1—Br1177.97 (9)
O1—N1—Co1121.18 (18)
C1i—C1—N1—O1179.81 (18)C1—N1—Co1—O391.1 (2)
C2—C1—N1—O1−0.7 (4)O1—N1—Co1—O3−88.7 (2)
C1i—C1—N1—Co10.02 (19)C1—N1—Co1—Br1−90.28 (19)
C2—C1—N1—Co1179.5 (2)O1—N1—Co1—Br189.92 (19)
C3i—C3—N2—O2−179.62 (19)C3—N2—Co1—N1i174.1 (2)
C4—C3—N2—O20.8 (5)O2—N2—Co1—N1i−2.4 (2)
C3i—C3—N2—Co13.8 (2)C3—N2—Co1—N2i−4.6 (3)
C4—C3—N2—Co1−175.8 (3)O2—N2—Co1—N2i178.98 (17)
C1—N1—Co1—N1i0.0 (2)C3—N2—Co1—O383.2 (2)
O1—N1—Co1—N1i−179.82 (14)O2—N2—Co1—O3−93.2 (2)
C1—N1—Co1—N2i178.6 (2)C3—N2—Co1—Br1−95.5 (2)
O1—N1—Co1—N2i−1.2 (2)O2—N2—Co1—Br188.1 (2)
D—H···AD—HH···AD···AD—H···A
O2—H2···O1i0.92 (1)1.58 (1)2.494 (3)169 (4)
O3—H3···O1ii0.85 (3)1.79 (3)2.616 (3)167 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2⋯O1i0.92 (1)1.58 (1)2.494 (3)169 (4)
O3—H3⋯O1ii0.85 (3)1.79 (3)2.616 (3)167 (4)

Symmetry codes: (i) ; (ii) .

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