Literature DB >> 21753938

[4-Bromo-N-(pyridin-2-yl-methyl-idene)aniline-κN,N']bis-(1,1,1,5,5,5-hexa-fluoro-pentane-2,4-dionato-κO,O')nickel(II).

Phimphaka Harding, David J Harding, Nitisastr Soponrat, Harry Adams.   

Abstract

The title compound, [Ni(C(5)HF(6)O(2))(2)(C(12)H(9)BrN(2))], the Ni(II) atom exhibits a pseudo-octa-hedral coordination geometry. The structure packs through C-H⋯Br inter-actions, forming a hydrogen-bonded ladder. There are also strong hydrogen-bonding inter-actions between two of the O atoms of the β-diketonate ligands and two H atoms on the pyridine ring of the Schiff base ligand.

Entities:  

Year:  2011        PMID: 21753938      PMCID: PMC3100069          DOI: 10.1107/S1600536811005599

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Harding, Harding, Sophonrat & Adams (2010 ▶); Harding, Harding, Tinpun et al. (2010 ▶); Aakeröy et al. (2004 ▶, 2005 ▶, 2007 ▶). For an introduction to crystal engineering, see: Braga et al. (2002 ▶). For details concerning the coordination of additional ligands to β-diketon­ate complexes, see: Chassot & Emmenegger (1996 ▶); Emmenegger et al. (2001 ▶). For a description of the Cambridge Structural database, see: Allen et al. (2002 ▶).

Experimental

Crystal data

[Ni(C5HF6O2)2(C12H9BrN2)] M = 733.95 Monoclinic, a = 31.251 (8) Å b = 10.006 (3) Å c = 17.653 (5) Å β = 103.952 (5)° V = 5358 (2) Å3 Z = 8 Mo Kα radiation μ = 2.33 mm−1 T = 150 K 0.22 × 0.12 × 0.11 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1997 ▶) T min = 0.628, T max = 0.784 27645 measured reflections 5988 independent reflections 3422 reflections with I > 2σ(I) R int = 0.145

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.132 S = 0.91 5988 reflections 379 parameters H-atom parameters constrained Δρmax = 1.24 e Å−3 Δρmin = −1.12 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811005599/zb2010sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811005599/zb2010Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C5HF6O2)2(C12H9BrN2)]F(000) = 2880
Mr = 733.95Dx = 1.820 Mg m3
Monoclinic, C2/cMelting point: 429 K
Hall symbol: -C2ycMo Kα radiation, λ = 0.71073 Å
a = 31.251 (8) ÅCell parameters from 3767 reflections
b = 10.006 (3) Åθ = 2.4–24.9°
c = 17.653 (5) ŵ = 2.33 mm1
β = 103.952 (5)°T = 150 K
V = 5358 (2) Å3Block, brown
Z = 80.22 × 0.12 × 0.11 mm
Bruker SMART CCD area-detector diffractometer5988 independent reflections
Radiation source: fine-focus sealed tube3422 reflections with I > 2σ(I)
graphiteRint = 0.145
Detector resolution: 100 pixels mm-1θmax = 27.5°, θmin = 1.3°
φ and ω scansh = −39→40
Absorption correction: multi-scan (SADABS; Bruker, 1997)k = −12→12
Tmin = 0.628, Tmax = 0.784l = −22→22
27645 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.132H-atom parameters constrained
S = 0.91w = 1/[σ2(Fo2) + (0.0546P)2] where P = (Fo2 + 2Fc2)/3
5988 reflections(Δ/σ)max < 0.001
379 parametersΔρmax = 1.24 e Å3
0 restraintsΔρmin = −1.12 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.089498 (18)0.60018 (5)0.17271 (3)0.01947 (16)
Br10.279804 (16)0.50379 (5)−0.01356 (3)0.03493 (16)
N10.10544 (11)0.4874 (3)0.0821 (2)0.0180 (8)
N20.03045 (12)0.5037 (3)0.1283 (2)0.0193 (8)
O10.06741 (10)0.7013 (3)0.25796 (16)0.0227 (7)
O20.07571 (10)0.7678 (3)0.10485 (16)0.0206 (7)
O30.14882 (9)0.6873 (3)0.21444 (17)0.0253 (7)
O40.10989 (9)0.4413 (3)0.24516 (16)0.0215 (7)
C10.22491 (15)0.4979 (4)0.0144 (3)0.0268 (11)
C20.20348 (15)0.3757 (5)0.0139 (3)0.0318 (12)
H20.21570.2965−0.00180.038*
C30.16424 (15)0.3716 (4)0.0365 (3)0.0269 (11)
H30.14970.28850.03750.032*
C40.14579 (14)0.4876 (4)0.0578 (3)0.0197 (10)
C50.16748 (15)0.6093 (4)0.0566 (3)0.0257 (11)
H50.15490.68920.07070.031*
C60.20726 (14)0.6144 (4)0.0351 (3)0.0236 (10)
H60.22210.69710.03470.028*
C70.07464 (14)0.4036 (4)0.0519 (3)0.0222 (10)
H70.07880.34100.01390.027*
C80.03340 (13)0.4058 (4)0.0765 (2)0.0168 (9)
C9−0.00087 (15)0.3178 (4)0.0481 (3)0.0255 (11)
H90.00190.25050.01160.031*
C10−0.03943 (15)0.3295 (4)0.0736 (3)0.0261 (11)
H10−0.06320.26910.05600.031*
C11−0.04250 (15)0.4301 (5)0.1249 (3)0.0265 (11)
H11−0.06870.44070.14260.032*
C12−0.00710 (14)0.5167 (4)0.1508 (3)0.0223 (10)
H12−0.00980.58700.18550.027*
C130.07108 (15)0.8261 (4)0.2653 (2)0.0236 (10)
C140.06750 (18)0.8781 (5)0.3451 (3)0.0326 (12)
C150.07746 (15)0.9195 (4)0.2105 (3)0.0249 (11)
H150.08101.01100.22500.030*
C160.07882 (15)0.8822 (4)0.1348 (3)0.0241 (11)
C170.08415 (17)0.9929 (4)0.0773 (3)0.0278 (11)
C180.18236 (15)0.6331 (4)0.2566 (3)0.0227 (10)
C190.22211 (17)0.7250 (6)0.2750 (3)0.0410 (14)
C200.18587 (15)0.5046 (4)0.2881 (3)0.0281 (11)
H200.21400.47400.31620.034*
C210.14966 (15)0.4192 (4)0.2797 (3)0.0232 (10)
C220.15671 (15)0.2806 (5)0.3172 (3)0.0286 (11)
F10.11909 (12)0.9686 (3)0.0484 (2)0.0590 (10)
F20.04965 (11)0.9967 (3)0.01655 (16)0.0474 (9)
F30.08890 (12)1.1150 (3)0.10758 (16)0.0516 (9)
F40.03084 (12)0.8339 (3)0.3627 (2)0.0651 (10)
F50.06729 (15)1.0080 (3)0.35147 (18)0.0703 (12)
F60.09967 (13)0.8311 (4)0.40128 (18)0.0775 (13)
F70.22453 (10)0.8019 (3)0.2159 (2)0.0584 (10)
F80.21997 (13)0.8058 (4)0.3339 (2)0.0789 (13)
F90.26008 (10)0.6604 (4)0.2971 (3)0.0827 (14)
F100.13059 (10)0.2608 (3)0.3655 (2)0.0540 (9)
F110.19792 (9)0.2582 (3)0.35786 (17)0.0395 (8)
F120.14753 (11)0.1857 (3)0.26264 (18)0.0522 (9)
U11U22U33U12U13U23
Ni10.0209 (3)0.0193 (3)0.0168 (3)−0.0020 (2)0.0019 (2)−0.0002 (2)
Br10.0284 (3)0.0261 (3)0.0550 (4)−0.0007 (2)0.0192 (3)−0.0007 (2)
N10.0176 (19)0.0186 (19)0.020 (2)0.0011 (15)0.0087 (16)0.0019 (15)
N20.019 (2)0.0198 (18)0.0171 (19)0.0022 (15)0.0002 (16)0.0014 (15)
O10.0265 (17)0.0234 (17)0.0181 (16)−0.0041 (13)0.0051 (14)−0.0022 (13)
O20.0269 (17)0.0229 (16)0.0123 (15)−0.0012 (13)0.0052 (14)0.0002 (12)
O30.0202 (17)0.0289 (17)0.0248 (17)−0.0049 (14)0.0014 (15)−0.0015 (14)
O40.0239 (17)0.0250 (16)0.0134 (15)−0.0003 (13)0.0001 (14)0.0030 (13)
C10.023 (3)0.026 (2)0.028 (3)0.003 (2)0.000 (2)0.001 (2)
C20.021 (3)0.025 (3)0.055 (4)0.002 (2)0.019 (2)0.000 (2)
C30.024 (3)0.018 (2)0.041 (3)−0.0019 (18)0.013 (2)0.000 (2)
C40.020 (2)0.020 (2)0.019 (2)−0.0013 (18)0.005 (2)0.0001 (18)
C50.031 (3)0.023 (2)0.024 (2)0.000 (2)0.008 (2)−0.002 (2)
C60.019 (2)0.025 (2)0.032 (3)−0.0018 (19)0.016 (2)0.002 (2)
C70.028 (3)0.016 (2)0.019 (2)0.0015 (19)0.000 (2)0.0013 (18)
C80.016 (2)0.021 (2)0.014 (2)0.0027 (18)0.0062 (18)0.0056 (18)
C90.030 (3)0.019 (2)0.023 (2)−0.0042 (19)−0.001 (2)−0.0012 (19)
C100.020 (3)0.035 (3)0.023 (3)−0.008 (2)0.005 (2)−0.001 (2)
C110.023 (3)0.038 (3)0.020 (2)−0.001 (2)0.007 (2)0.002 (2)
C120.022 (3)0.027 (2)0.017 (2)0.0056 (19)0.003 (2)0.0011 (18)
C130.029 (3)0.024 (2)0.017 (2)−0.005 (2)0.003 (2)−0.0033 (19)
C140.049 (3)0.027 (3)0.024 (3)−0.012 (2)0.012 (3)−0.005 (2)
C150.031 (3)0.020 (2)0.025 (3)−0.0018 (19)0.009 (2)−0.0032 (19)
C160.025 (3)0.019 (2)0.023 (2)−0.0035 (18)−0.003 (2)0.0025 (19)
C170.034 (3)0.024 (2)0.026 (3)−0.001 (2)0.009 (2)0.001 (2)
C180.025 (3)0.029 (3)0.015 (2)−0.005 (2)0.007 (2)−0.0012 (19)
C190.030 (3)0.044 (3)0.046 (4)−0.011 (3)0.003 (3)0.005 (3)
C200.020 (2)0.034 (3)0.027 (3)0.001 (2)0.000 (2)0.002 (2)
C210.026 (3)0.026 (2)0.016 (2)0.002 (2)0.002 (2)−0.0045 (19)
C220.023 (3)0.033 (3)0.030 (3)0.001 (2)0.008 (2)0.003 (2)
F10.064 (2)0.051 (2)0.075 (3)0.0070 (17)0.042 (2)0.0280 (18)
F20.059 (2)0.0475 (19)0.0271 (16)−0.0053 (15)−0.0060 (16)0.0152 (14)
F30.100 (3)0.0219 (15)0.0304 (17)−0.0123 (16)0.0116 (18)0.0018 (13)
F40.077 (3)0.076 (2)0.058 (2)−0.030 (2)0.045 (2)−0.0352 (19)
F50.158 (4)0.0290 (18)0.0383 (19)−0.0167 (19)0.052 (2)−0.0129 (14)
F60.086 (3)0.113 (3)0.0216 (17)0.031 (2)−0.0094 (19)−0.0215 (19)
F70.050 (2)0.066 (2)0.056 (2)−0.0321 (17)0.0068 (18)0.0199 (18)
F80.081 (3)0.090 (3)0.069 (3)−0.051 (2)0.022 (2)−0.045 (2)
F90.0247 (18)0.076 (3)0.136 (4)−0.0113 (18)−0.004 (2)0.041 (3)
F100.046 (2)0.054 (2)0.072 (2)0.0198 (15)0.0331 (19)0.0345 (17)
F110.0330 (16)0.0378 (16)0.0419 (18)0.0070 (13)−0.0021 (15)0.0108 (13)
F120.068 (2)0.0274 (16)0.050 (2)0.0015 (15)−0.0074 (18)−0.0033 (15)
Ni1—O32.020 (3)C9—H90.9500
Ni1—O42.044 (3)C10—C111.372 (6)
Ni1—O22.045 (3)C10—H100.9500
Ni1—N22.063 (3)C11—C121.393 (6)
Ni1—O12.066 (3)C11—H110.9500
Ni1—N12.113 (4)C12—H120.9500
Br1—C11.897 (5)C13—C151.394 (6)
N1—C71.291 (5)C13—C141.531 (7)
N1—C41.426 (6)C14—F51.304 (5)
N2—C121.332 (6)C14—F61.317 (6)
N2—C81.358 (5)C14—F41.332 (6)
O1—C131.258 (5)C15—C161.399 (6)
O2—C161.255 (5)C15—H150.9500
O3—C181.253 (5)C16—C171.538 (6)
O4—C211.265 (5)C17—F21.326 (5)
C1—C61.376 (6)C17—F31.327 (5)
C1—C21.393 (6)C17—F11.334 (6)
C2—C31.379 (6)C18—C201.394 (6)
C2—H20.9500C18—C191.517 (7)
C3—C41.388 (6)C19—F71.313 (6)
C3—H30.9500C19—F91.325 (6)
C4—C51.396 (6)C19—F81.331 (7)
C5—C61.386 (6)C20—C211.397 (6)
C5—H50.9500C20—H200.9500
C6—H60.9500C21—C221.529 (6)
C7—C81.456 (6)C22—F101.330 (6)
C7—H70.9500C22—F121.333 (5)
C8—C91.384 (6)C22—F111.333 (5)
C9—C101.390 (7)
O3—Ni1—O489.27 (12)C11—C10—C9118.7 (4)
O3—Ni1—O284.55 (12)C11—C10—H10120.7
O4—Ni1—O2173.82 (12)C9—C10—H10120.7
O3—Ni1—N2177.27 (13)C10—C11—C12119.8 (5)
O4—Ni1—N289.36 (12)C10—C11—H11120.1
O2—Ni1—N296.80 (12)C12—C11—H11120.1
O3—Ni1—O187.79 (12)N2—C12—C11121.9 (4)
O4—Ni1—O191.93 (12)N2—C12—H12119.1
O2—Ni1—O187.99 (12)C11—C12—H12119.1
N2—Ni1—O194.62 (13)O1—C13—C15128.3 (4)
O3—Ni1—N198.24 (13)O1—C13—C14114.1 (4)
O4—Ni1—N187.91 (12)C15—C13—C14117.7 (4)
O2—Ni1—N192.82 (12)F5—C14—F6108.1 (4)
N2—Ni1—N179.35 (14)F5—C14—F4106.8 (5)
O1—Ni1—N1173.97 (13)F6—C14—F4104.4 (4)
C7—N1—C4120.1 (4)F5—C14—C13114.9 (4)
C7—N1—Ni1111.8 (3)F6—C14—C13111.0 (4)
C4—N1—Ni1127.9 (3)F4—C14—C13111.0 (4)
C12—N2—C8118.6 (4)C13—C15—C16121.8 (4)
C12—N2—Ni1127.8 (3)C13—C15—H15119.1
C8—N2—Ni1113.2 (3)C16—C15—H15119.1
C13—O1—Ni1121.6 (3)O2—C16—C15129.0 (4)
C16—O2—Ni1121.2 (3)O2—C16—C17112.9 (4)
C18—O3—Ni1126.3 (3)C15—C16—C17118.1 (4)
C21—O4—Ni1124.0 (3)F2—C17—F3106.8 (4)
C6—C1—C2121.5 (5)F2—C17—F1106.0 (4)
C6—C1—Br1119.2 (3)F3—C17—F1107.4 (4)
C2—C1—Br1119.2 (3)F2—C17—C16111.0 (4)
C3—C2—C1118.9 (4)F3—C17—C16114.7 (4)
C3—C2—H2120.5F1—C17—C16110.5 (4)
C1—C2—H2120.5O3—C18—C20127.6 (4)
C2—C3—C4120.7 (4)O3—C18—C19112.9 (4)
C2—C3—H3119.7C20—C18—C19119.5 (4)
C4—C3—H3119.7F7—C19—F9107.5 (5)
C3—C4—C5119.4 (4)F7—C19—F8106.8 (5)
C3—C4—N1122.4 (4)F9—C19—F8106.1 (5)
C5—C4—N1118.2 (4)F7—C19—C18112.7 (4)
C6—C5—C4120.5 (4)F9—C19—C18113.3 (4)
C6—C5—H5119.8F8—C19—C18110.0 (5)
C4—C5—H5119.8C18—C20—C21122.6 (4)
C1—C6—C5119.0 (4)C18—C20—H20118.7
C1—C6—H6120.5C21—C20—H20118.7
C5—C6—H6120.5O4—C21—C20128.4 (4)
N1—C7—C8119.5 (4)O4—C21—C22112.9 (4)
N1—C7—H7120.3C20—C21—C22118.7 (4)
C8—C7—H7120.3F10—C22—F12107.4 (4)
N2—C8—C9122.1 (4)F10—C22—F11107.0 (4)
N2—C8—C7114.9 (4)F12—C22—F11106.3 (4)
C9—C8—C7123.0 (4)F10—C22—C21111.5 (4)
C8—C9—C10119.0 (4)F12—C22—C21110.5 (4)
C8—C9—H9120.5F11—C22—C21113.9 (4)
C10—C9—H9120.5
D—H···AD—HH···AD···AD—H···A
C6—H6···Br1i0.953.023.870 (3)151
C2—H2···Br1ii0.953.023.833 (3)145
C12—H12···O1iii0.952.533.320 (4)140
C11—H11···O4iii0.952.613.470 (3)151
Table 1

Selected bond lengths (Å)

Ni1—O32.020 (3)
Ni1—O42.044 (3)
Ni1—O22.045 (3)
Ni1—N22.063 (3)
Ni1—O12.066 (3)
Ni1—N12.113 (4)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6⋯Br1i0.953.023.870 (3)151
C2—H2⋯Br1ii0.953.023.833 (3)145
C12—H12⋯O1iii0.952.533.320 (4)140
C11—H11⋯O4iii0.952.613.470 (3)151

Symmetry codes: (i) ; (ii) ; (iii) .

  5 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  Directed supramolecular assembly of infinite 1-D M(II)-containing chains (M = Cu, Co, Ni) using structurally bifunctional ligands.

Authors:  Christer B Aakeröy; Nate Schultheiss; John Desper
Journal:  Inorg Chem       Date:  2005-07-11       Impact factor: 5.165

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Chelate effect in the gas phase. The complexes of Ni(2,2,6,6-tetramethyl-3,5-heptanedionate)(2) with bidentate ligands.

Authors:  F Emmenegger; C W Schlaepfer; H Stoeckli-Evans; M Piccand; H Piekarski
Journal:  Inorg Chem       Date:  2001-07-30       Impact factor: 5.165

5.  [(4-Bromo-phen-yl)(2-pyridyl-methyl-idene)amine-κN,N']bis-(1,1,1,5,5,5-hexa-fluoro-pentane-2,4-dionato-κO,O')cobalt(II).

Authors:  Phimphaka Harding; David J Harding; Nitisastr Soponrat; Harry Adams
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-21
  5 in total
  1 in total

1.  Crystal structure of trans-bis-{4-bromo-N-[(pyridin-2-yl)-methyl-idene]aniline-κ(2) N,N'}di-chlorido-ruthenium(II).

Authors:  Kittipong Chainok; Filip Kielar
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-08-22
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.