Literature DB >> 21753933

catena-Poly[[zinc-bis-(μ-2-sulfido-1H-benzimidazol-3-ium-5-carboxyl-ato)-κO:S;κS:O] trihydrate].

Ya-Ping Li, Da-Jun Sun, Hu Zang, Li-Ying Han, Guan-Fang Su.   

Abstract

In the title compound, {[Zn(C(8)H(5)N(2)O(2)S)(2)]·3H(2)O}(n), the Zn(II) atom, lying on a twofold rotation axis, is four-coordinated by two S atoms and two O atoms from four 2-sulfido-1H-benzimidazol-3-ium-5-carboxyl-ate (H(2)mbidc) ligands in a distorted tetra-hedral geometry. Two H(2)mbidc ligands bridge two Zn(II) atoms, generating a double-chain along [[Formula: see text]01]. Adjacent chains are linked by N-H⋯O and O-H⋯O hydrogen bonds, forming a three-dimensional supra-molecular network. One of the two water molecules also lies on a twofold rotation axis.

Entities:  

Year:  2011        PMID: 21753933      PMCID: PMC3099766          DOI: 10.1107/S1600536811006532

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For coordination polymers with helical chain structures, see: Chen & Liu (2002 ▶); Cui et al. (2003 ▶); Hu et al. (2008 ▶); Ngo & Lin (2002 ▶); Xiao et al. (2007 ▶); Yan et al. (2005 ▶).

Experimental

Crystal data

[Zn(C8H5N2O2S)2]·3H2O M = 505.86 Monoclinic, a = 8.031 (1) Å b = 9.732 (3) Å c = 12.436 (7) Å β = 96.584 (9)° V = 965.6 (6) Å3 Z = 2 Mo Kα radiation μ = 1.54 mm−1 T = 293 K 0.20 × 0.18 × 0.15 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996) ▶ T min = 0.749, T max = 0.802 4749 measured reflections 1710 independent reflections 1267 reflections with I > 2σ(I) R int = 0.049

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.099 S = 0.98 1710 reflections 137 parameters H-atom parameters constrained Δρmax = 0.42 e Å−3 Δρmin = −0.28 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811006532/hy2396sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811006532/hy2396Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C8H5N2O2S)2]·3H2OF(000) = 516
Mr = 505.86Dx = 1.740 Mg m3
Monoclinic, P2/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yacCell parameters from 4749 reflections
a = 8.031 (1) Åθ = 1.3–26.0°
b = 9.732 (3) ŵ = 1.54 mm1
c = 12.436 (7) ÅT = 293 K
β = 96.584 (9)°Block, colorless
V = 965.6 (6) Å30.20 × 0.18 × 0.15 mm
Z = 2
Bruker APEXII CCD diffractometer1710 independent reflections
Radiation source: fine-focus sealed tube1267 reflections with I > 2σ(I)
graphiteRint = 0.049
φ and ω scansθmax = 25.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −9→8
Tmin = 0.749, Tmax = 0.802k = −9→11
4749 measured reflectionsl = −14→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.099H-atom parameters constrained
S = 0.98w = 1/[σ2(Fo2) + (0.0471P)2 + 0.5228P] where P = (Fo2 + 2Fc2)/3
1710 reflections(Δ/σ)max < 0.001
137 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.28 e Å3
xyzUiso*/Ueq
Zn10.75000.20862 (7)0.75000.0295 (2)
S10.46579 (13)0.94066 (11)1.22275 (9)0.0366 (3)
O10.9750 (3)0.4579 (3)0.7829 (2)0.0360 (7)
O20.8006 (3)0.3368 (3)0.8738 (2)0.0323 (7)
N10.6753 (4)0.9126 (3)1.0706 (2)0.0283 (8)
H10.69050.99971.06550.034*
N20.5899 (4)0.7152 (3)1.1261 (2)0.0298 (8)
H20.54230.65511.16300.036*
C10.5795 (4)0.8514 (4)1.1382 (3)0.0266 (9)
C20.7452 (4)0.8136 (4)1.0112 (3)0.0258 (9)
C30.6897 (4)0.6859 (4)1.0445 (3)0.0249 (9)
C40.7307 (4)0.5650 (4)0.9970 (3)0.0269 (9)
H40.69200.48071.01910.032*
C50.8334 (4)0.5746 (4)0.9136 (3)0.0261 (9)
C60.8901 (5)0.7016 (4)0.8817 (3)0.0325 (10)
H60.95780.70480.82590.039*
C70.8494 (5)0.8233 (4)0.9299 (3)0.0348 (10)
H70.89000.90750.90890.042*
C80.8752 (5)0.4488 (4)0.8531 (3)0.0280 (9)
O1W0.7018 (4)1.1927 (3)1.0612 (2)0.0472 (8)
H1A0.77661.22101.02430.071*
H1B0.68961.25301.10730.071*
O2W1.25000.6297 (5)0.75000.0456 (11)
H2A1.17200.57770.75900.068*
U11U22U33U12U13U23
Zn10.0350 (4)0.0257 (4)0.0303 (4)0.0000.0144 (3)0.000
S10.0409 (7)0.0283 (7)0.0448 (6)−0.0041 (5)0.0230 (5)−0.0092 (5)
O10.0392 (16)0.0356 (18)0.0363 (16)−0.0035 (14)0.0184 (13)−0.0098 (14)
O20.0401 (16)0.0301 (18)0.0289 (15)−0.0035 (13)0.0129 (12)−0.0031 (12)
N10.0341 (19)0.0180 (18)0.0353 (18)−0.0021 (15)0.0148 (15)−0.0016 (15)
N20.0358 (19)0.025 (2)0.0323 (18)−0.0004 (16)0.0181 (15)0.0008 (16)
C10.026 (2)0.026 (2)0.029 (2)0.0005 (18)0.0077 (17)−0.0018 (17)
C20.026 (2)0.022 (2)0.030 (2)0.0017 (17)0.0081 (16)−0.0006 (17)
C30.026 (2)0.030 (2)0.0206 (18)0.0023 (17)0.0088 (16)0.0013 (17)
C40.029 (2)0.023 (2)0.030 (2)0.0004 (17)0.0091 (17)0.0042 (17)
C50.028 (2)0.031 (2)0.0209 (19)0.0029 (18)0.0067 (16)−0.0017 (17)
C60.033 (2)0.038 (3)0.029 (2)−0.003 (2)0.0162 (17)0.003 (2)
C70.042 (2)0.028 (3)0.039 (2)−0.0067 (19)0.021 (2)0.0044 (19)
C80.025 (2)0.035 (3)0.024 (2)0.0016 (19)−0.0012 (17)−0.0022 (18)
O1W0.064 (2)0.0356 (19)0.0453 (18)−0.0104 (16)0.0178 (15)−0.0048 (15)
O2W0.046 (3)0.037 (3)0.058 (3)0.0000.023 (2)0.000
Zn1—O21.987 (3)C2—C31.400 (5)
Zn1—S1i2.3159 (12)C3—C41.374 (5)
S1—C11.707 (4)C4—C51.400 (5)
O1—C81.254 (4)C4—H40.9300
O2—C81.284 (5)C5—C61.391 (5)
N1—C11.342 (4)C5—C81.494 (5)
N1—C21.373 (5)C6—C71.384 (6)
N1—H10.8600C6—H60.9300
N2—C11.338 (5)C7—H70.9300
N2—C31.392 (4)O1W—H1A0.84
N2—H20.8600O1W—H1B0.83
C2—C71.388 (5)O2W—H2A0.82
O2—Zn1—O2ii102.22 (17)C4—C3—N2132.5 (4)
O2—Zn1—S1i111.74 (8)C4—C3—C2122.2 (3)
O2ii—Zn1—S1i114.66 (8)N2—C3—C2105.3 (3)
O2—Zn1—S1iii114.66 (8)C3—C4—C5116.9 (4)
O2ii—Zn1—S1iii111.74 (8)C3—C4—H4121.5
S1i—Zn1—S1iii102.30 (6)C5—C4—H4121.5
C1—S1—Zn1i103.48 (14)C6—C5—C4120.7 (4)
C8—O2—Zn1115.9 (2)C6—C5—C8119.0 (3)
C1—N1—C2109.0 (3)C4—C5—C8120.2 (4)
C1—N1—H1125.5C7—C6—C5122.4 (3)
C2—N1—H1125.5C7—C6—H6118.8
C1—N2—C3109.5 (3)C5—C6—H6118.8
C1—N2—H2125.3C6—C7—C2116.7 (4)
C3—N2—H2125.3C6—C7—H7121.6
N2—C1—N1108.8 (3)C2—C7—H7121.6
N2—C1—S1128.2 (3)O1—C8—O2123.3 (4)
N1—C1—S1123.1 (3)O1—C8—C5119.4 (4)
N1—C2—C7131.5 (4)O2—C8—C5117.2 (3)
N1—C2—C3107.4 (3)H1A—O1W—H1B107.0
C7—C2—C3121.0 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1W0.861.882.738 (5)174
N2—H2···O1iv0.861.982.812 (4)163
O1W—H1A···O2v0.842.212.907 (4)140
O2W—H2A···O10.822.022.837 (4)177
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O1W0.861.882.738 (5)174
N2—H2⋯O1i0.861.982.812 (4)163
O1W—H1A⋯O2ii0.842.212.907 (4)140
O2W—H2A⋯O10.822.022.837 (4)177

Symmetry codes: (i) ; (ii) .

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