Literature DB >> 21749296

Research progress of RNA quadruplex.

Xiaohui Ji1, Hongxia Sun, Huaxi Zhou, Junfeng Xiang, Yalin Tang, Changqi Zhao.   

Abstract

RNA/DNA sequences rich in guanine (G) can form a 4-strand structure, G-quadruplex, which has been extensively researched and observed in mammalian, fungi, and plants, with in vivo existence in eukaryotic cells. Compared with DNA quadruplex, the potential existence of RNA quadruplex appears to be generally rare; however, it is believed by some researchers to be more inevitable in vivo and speculated to play an important role where it exists. Recently, researches concerning the function of G-quadruplexes in RNAs commence, making much progress. However, there is no available review particularly focusing on RNA quadruplex till now as we know. Therefore, we decide to give a review to comprehensively summarize research progress on it. This review highlights the diverse topologies for RNA quadruplex structure and its effect factors; outlines the current knowledge of RNA quadruplex's physiological functions in biological systems, especially in gene expression; and presents the prospects of RNA quadruplex.

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Year:  2011        PMID: 21749296     DOI: 10.1089/nat.2010.0272

Source DB:  PubMed          Journal:  Nucleic Acid Ther        ISSN: 2159-3337            Impact factor:   5.486


  16 in total

1.  Stabilization of the G-quadruplex at the VEGF IRES represses cap-independent translation.

Authors:  Anne Cammas; Alexandre Dubrac; Benjamin Morel; Assala Lamaa; Christian Touriol; Marie-Paule Teulade-Fichou; Hervé Prats; Stefania Millevoi
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

2.  Distinct differences in metal ion specificity of RNA and DNA G-quadruplexes.

Authors:  Helena Guiset Miserachs; Daniela Donghi; Richard Börner; Silke Johannsen; Roland K O Sigel
Journal:  J Biol Inorg Chem       Date:  2016-10-04       Impact factor: 3.358

3.  The interaction of telomeric DNA and C-myc22 G-quadruplex with 11 natural alkaloids.

Authors:  Xiaohui Ji; Hongxia Sun; Huaxi Zhou; Junfeng Xiang; Yalin Tang; Changqi Zhao
Journal:  Nucleic Acid Ther       Date:  2012-04       Impact factor: 5.486

4.  Specific recognition and stabilization of monomeric and multimeric G-quadruplexes by cationic porphyrin TMPipEOPP under molecular crowding conditions.

Authors:  Li-Na Zhu; Bin Wu; De-Ming Kong
Journal:  Nucleic Acids Res       Date:  2013-02-20       Impact factor: 16.971

Review 5.  5'-UTR RNA G-quadruplexes: translation regulation and targeting.

Authors:  Anthony Bugaut; Shankar Balasubramanian
Journal:  Nucleic Acids Res       Date:  2012-02-20       Impact factor: 16.971

6.  QGRS-H Predictor: a web server for predicting homologous quadruplex forming G-rich sequence motifs in nucleotide sequences.

Authors:  Camille Menendez; Scott Frees; Paramjeet S Bagga
Journal:  Nucleic Acids Res       Date:  2012-05-10       Impact factor: 16.971

7.  Exploring mRNA 3'-UTR G-quadruplexes: evidence of roles in both alternative polyadenylation and mRNA shortening.

Authors:  Jean-Denis Beaudoin; Jean-Pierre Perreault
Journal:  Nucleic Acids Res       Date:  2013-04-22       Impact factor: 16.971

8.  C9orf72 hexanucleotide repeat associated with amyotrophic lateral sclerosis and frontotemporal dementia forms RNA G-quadruplexes.

Authors:  Pietro Fratta; Sarah Mizielinska; Andrew J Nicoll; Mire Zloh; Elizabeth M C Fisher; Gary Parkinson; Adrian M Isaacs
Journal:  Sci Rep       Date:  2012-12-21       Impact factor: 4.379

9.  QGRS-Conserve: a computational method for discovering evolutionarily conserved G-quadruplex motifs.

Authors:  Scott Frees; Camille Menendez; Matt Crum; Paramjeet S Bagga
Journal:  Hum Genomics       Date:  2014-05-01       Impact factor: 4.639

10.  Identification and characterization of RNA guanine-quadruplex binding proteins.

Authors:  Annekathrin von Hacht; Oliver Seifert; Marcus Menger; Tatjana Schütze; Amit Arora; Zoltán Konthur; Peter Neubauer; Anke Wagner; Christoph Weise; Jens Kurreck
Journal:  Nucleic Acids Res       Date:  2014-04-25       Impact factor: 16.971

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