Literature DB >> 21744261

Characterization of novel small RNAs from tea (Camellia sinensis L.).

Prashant Mohanpuria1, Sudesh Kumar Yadav.   

Abstract

Small RNAs play important roles in plant development, metabolism, signal transduction and responses to biotic and abiotic stresses by affecting gene expression. Tea (Camellia sinensis L.) is an important commercial crop in the world. To understand the regulatory mechanisms involving small RNAs in tea metabolism, we constructed a small RNA (sRNA) library from its tea drink manufacturing tissue part i.e. topmost two leaves and a bud. For the first time, we isolated and cloned six novel small RNAs candidates from tea. These were predicted to target 67 genes responsible for various important plant functions. Isolated small RNAs were validated through expression analysis in young leaf and old leaf during non-dormant and dormant growth phases of tea. Results suggest the probable role of isolated small RNAs in development and seasonal variations of tea.

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Year:  2011        PMID: 21744261     DOI: 10.1007/s11033-011-1178-3

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  41 in total

1.  osa-MIR393: a salinity- and alkaline stress-related microRNA gene.

Authors:  Peng Gao; Xi Bai; Liang Yang; Dekang Lv; Xin Pan; Yong Li; Hua Cai; Wei Ji; Qin Chen; Yanming Zhu
Journal:  Mol Biol Rep       Date:  2010-03-25       Impact factor: 2.316

2.  Identification and characterization of new plant microRNAs using EST analysis.

Authors:  Bao Hong Zhang; Xiao Ping Pan; Qing Lian Wang; George P Cobb; Todd A Anderson
Journal:  Cell Res       Date:  2005-05       Impact factor: 25.617

3.  A guard-cell-specific MYB transcription factor regulates stomatal movements and plant drought tolerance.

Authors:  Eleonora Cominelli; Massimo Galbiati; Alain Vavasseur; Lucio Conti; Tea Sala; Marnik Vuylsteke; Nathalie Leonhardt; Stephen L Dellaporta; Chiara Tonelli
Journal:  Curr Biol       Date:  2005-07-12       Impact factor: 10.834

4.  A simplified method for cloning of short interfering RNAs from Brassica juncea infected with Turnip mosaic potyvirus and Turnip crinkle carmovirus.

Authors:  Thien Ho; Denise Pallett; Rachel Rusholme; Tamas Dalmay; Hui Wang
Journal:  J Virol Methods       Date:  2006-07-03       Impact factor: 2.014

5.  Cloning and characterization of microRNAs from rice.

Authors:  Ramanjulu Sunkar; Thomas Girke; Pradeep Kumar Jain; Jian-Kang Zhu
Journal:  Plant Cell       Date:  2005-04-01       Impact factor: 11.277

6.  Identification of microRNAs in wild soybean (Glycine soja).

Authors:  Rui Chen; Zheng Hu; Hui Zhang
Journal:  J Integr Plant Biol       Date:  2009-12       Impact factor: 7.061

7.  BRASSINOSTEROID UPREGULATED1, encoding a helix-loop-helix protein, is a novel gene involved in brassinosteroid signaling and controls bending of the lamina joint in rice.

Authors:  Atsunori Tanaka; Hitoshi Nakagawa; Chikako Tomita; Zenpei Shimatani; Miki Ohtake; Takahito Nomura; Chang-Jie Jiang; Joseph G Dubouzet; Shoshi Kikuchi; Hitoshi Sekimoto; Takao Yokota; Tadao Asami; Takashi Kamakura; Masaki Mori
Journal:  Plant Physiol       Date:  2009-07-31       Impact factor: 8.340

Review 8.  Structure and function of homodomain-leucine zipper (HD-Zip) proteins.

Authors:  Mohamed Elhiti; Claudio Stasolla
Journal:  Plant Signal Behav       Date:  2009-02

9.  Cloning and characterization of microRNAs from Brassica napus.

Authors:  Lei Wang; Ming-Bo Wang; Jin-Xing Tu; Christopher A Helliwell; Peter M Waterhouse; Elizabeth S Dennis; Ting-Dong Fu; Yun-Liu Fan
Journal:  FEBS Lett       Date:  2007-07-16       Impact factor: 4.124

10.  In vivo analysis of the RNA interference mechanism in Trypanosoma brucei.

Authors:  Christian Tschudi; Appolinaire Djikeng; Huafang Shi; Elisabetta Ullu
Journal:  Methods       Date:  2003-08       Impact factor: 3.608

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  11 in total

Review 1.  Biotechnological advances in tea (Camellia sinensis [L.] O. Kuntze): a review.

Authors:  Mainaak Mukhopadhyay; Tapan K Mondal; Pradeep K Chand
Journal:  Plant Cell Rep       Date:  2015-11-13       Impact factor: 4.570

2.  Differential expression of microRNAs in dormant bud of tea [Camellia sinensis (L.) O. Kuntze].

Authors:  Anburaj Jeyaraj; Viswanathan Chandran; Prabu Gajjeraman
Journal:  Plant Cell Rep       Date:  2014-07       Impact factor: 4.570

3.  Utilization of microRNAs and their regulatory functions for improving biotic stress tolerance in tea plant [Camellia sinensis (L.) O. Kuntze].

Authors:  Anburaj Jeyaraj; Tamilselvi Elango; Xinghui Li; Guiyi Guo
Journal:  RNA Biol       Date:  2020-06-16       Impact factor: 4.652

4.  Identification of miRNAs and their targets in tea (Camellia sinensis).

Authors:  Quan-wu Zhu; Yao-ping Luo
Journal:  J Zhejiang Univ Sci B       Date:  2013-10       Impact factor: 3.066

5.  Integrated RNA-Seq and sRNA-Seq Analysis Identifies Chilling and Freezing Responsive Key Molecular Players and Pathways in Tea Plant (Camellia sinensis).

Authors:  Chao Zheng; Lei Zhao; Yu Wang; Jiazhi Shen; Yinfei Zhang; Sisi Jia; Yusheng Li; Zhaotang Ding
Journal:  PLoS One       Date:  2015-04-22       Impact factor: 3.240

6.  Identification and characterization of cold-responsive microRNAs in tea plant (Camellia sinensis) and their targets using high-throughput sequencing and degradome analysis.

Authors:  Yue Zhang; Xujun Zhu; Xuan Chen; Changnian Song; Zhongwei Zou; Yuhua Wang; Mingle Wang; Wanping Fang; Xinghui Li
Journal:  BMC Plant Biol       Date:  2014-10-21       Impact factor: 4.215

7.  Selection and Verification of Candidate Reference Genes for Mature MicroRNA Expression by Quantitative RT-PCR in the Tea Plant (Camellia sinensis).

Authors:  Hui Song; Xiao Zhang; Cong Shi; Shuangshuang Wang; Ailin Wu; Chaoling Wei
Journal:  Genes (Basel)       Date:  2016-05-28       Impact factor: 4.096

8.  Brassinosteroids Improve Quality of Summer Tea (Camellia sinensis L.) by Balancing Biosynthesis of Polyphenols and Amino Acids.

Authors:  Xin Li; Golam J Ahammed; Zhi-Xin Li; Lan Zhang; Ji-Peng Wei; Chen Shen; Peng Yan; Li-Ping Zhang; Wen-Yan Han
Journal:  Front Plant Sci       Date:  2016-08-30       Impact factor: 5.753

9.  Genome-wide identification of microRNAs responsive to Ectropis oblique feeding in tea plant (Camellia sinensis L.).

Authors:  Anburaj Jeyaraj; Shengrui Liu; Xiao Zhang; Ran Zhang; Mingzhu Shangguan; Chaoling Wei
Journal:  Sci Rep       Date:  2017-10-19       Impact factor: 4.379

10.  Genome-wide identification of conserved and novel microRNAs in one bud and two tender leaves of tea plant (Camellia sinensis) by small RNA sequencing, microarray-based hybridization and genome survey scaffold sequences.

Authors:  Anburaj Jeyaraj; Xiao Zhang; Yan Hou; Mingzhu Shangguan; Prabu Gajjeraman; Yeyun Li; Chaoling Wei
Journal:  BMC Plant Biol       Date:  2017-11-21       Impact factor: 4.215

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