Literature DB >> 21744244

A Hessian-based filter for vascular segmentation of noisy hepatic CT scans.

Amir H Foruzan1, Reza A Zoroofi, Yoshinobu Sato, Masatoshi Hori.   

Abstract

PURPOSE: Extraction and enhancement of tubular structures are important in image processing applications, especially in the analysis of liver CT scans where delineation of vascular structures is needed for surgical planning. Portal vein cross-sections have circular or elliptical shapes, so an algorithm must accommodate both. A vessel segmentation method based on medial-axis points was developed and tested on portal veins in CT images.
METHODS: A medial-axis enhancement filter was developed. Consider a line passing through a point inside a tube and intersecting the edges of the tube. If the point is located on the medial axis, the distance of the point in the direction of the line to the edges of the tube will be equal. This feature was employed in a multi-scale framework to identify liver vessels. Dynamic thresholding was used to reduce noise sensitivity. The isotropic coefficient introduced by Pock et al. was used to reduce the response of the filter for asymmetric cross-sections.
RESULTS: Quantitative and qualitative evaluation of the proposed method were performed using both 2D/3D and synthetic/clinical datasets. Compared to other methods for medial-axis enhancement, our method produces better results in low-resolution CT images. Detection rate of the medial axis by the proposed method in a noisy image of standard deviation equal to 0.3 is 68% higher than prior methods.
CONCLUSION: A new Hessian-based method for medial axis vessel segmentation was developed and tested. This method produced superior results compared to prior methods. This new method has the potential for many applications of medial-axis enhancement.

Mesh:

Year:  2011        PMID: 21744244     DOI: 10.1007/s11548-011-0640-y

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  11 in total

1.  Three-dimensional multi-scale line filter for segmentation and visualization of curvilinear structures in medical images.

Authors:  Y Sato; S Nakajima; N Shiraga; H Atsumi; S Yoshida; T Koller; G Gerig; R Kikinis
Journal:  Med Image Anal       Date:  1998-06       Impact factor: 8.545

2.  Initialization, noise, singularities, and scale in height ridge traversal for tubular object centerline extraction.

Authors:  Stephen R Aylward; Elizabeth Bullitt
Journal:  IEEE Trans Med Imaging       Date:  2002-02       Impact factor: 10.048

3.  Vessel tree reconstruction in thoracic CT scans with application to nodule detection.

Authors:  Gady Agam; Samuel G Armato; Changhua Wu
Journal:  IEEE Trans Med Imaging       Date:  2005-04       Impact factor: 10.048

4.  Automatic segmentation of 3D micro-CT coronary vascular images.

Authors:  Jack Lee; Patricia Beighley; Erik Ritman; Nicolas Smith
Journal:  Med Image Anal       Date:  2007-08-01       Impact factor: 8.545

5.  Probabilistic vessel axis tracing and its application to vessel segmentation with stream surfaces and minimum cost paths.

Authors:  Wilbur C K Wong; Albert C S Chung
Journal:  Med Image Anal       Date:  2007-06-02       Impact factor: 8.545

6.  Segmentation and quantification of human vessels using a 3-D cylindrical intensity model.

Authors:  Stefan Wörz; Karl Rohr
Journal:  IEEE Trans Image Process       Date:  2007-08       Impact factor: 10.856

7.  A variational method for geometric regularization of vascular segmentation in medical images.

Authors:  Ali Gooya; Hongen Liao; Kiyoshi Matsumiya; Ken Masamune; Yoshitaka Masutani; Takeyoshi Dohi
Journal:  IEEE Trans Image Process       Date:  2008-08       Impact factor: 10.856

8.  A non-parametric vessel detection method for complex vascular structures.

Authors:  Xiaoning Qian; Matthew P Brennan; Donald P Dione; Wawrzyniec L Dobrucki; Marcel P Jackowski; Christopher K Breuer; Albert J Sinusas; Xenophon Papademetris
Journal:  Med Image Anal       Date:  2008-06-14       Impact factor: 8.545

Review 9.  A review of 3D vessel lumen segmentation techniques: models, features and extraction schemes.

Authors:  David Lesage; Elsa D Angelini; Isabelle Bloch; Gareth Funka-Lea
Journal:  Med Image Anal       Date:  2009-08-12       Impact factor: 8.545

10.  Segmental anatomy of the liver: poor correlation with CT.

Authors:  J H Fasel; D Selle; C J Evertsz; F Terrier; H O Peitgen; P Gailloud
Journal:  Radiology       Date:  1998-01       Impact factor: 11.105

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  4 in total

1.  Combining deep learning with anatomical analysis for segmentation of the portal vein for liver SBRT planning.

Authors:  Bulat Ibragimov; Diego Toesca; Daniel Chang; Albert Koong; Lei Xing
Journal:  Phys Med Biol       Date:  2017-11-10       Impact factor: 3.609

2.  Vascular segmentation in hepatic CT images using adaptive threshold fuzzy connectedness method.

Authors:  Xiaoxi Guo; Shaohui Huang; Xiaozhu Fu; Boliang Wang; Xiaoyang Huang
Journal:  Biomed Eng Online       Date:  2015-06-19       Impact factor: 2.819

3.  A vessel active contour model for vascular segmentation.

Authors:  Yun Tian; Qingli Chen; Wei Wang; Yu Peng; Qingjun Wang; Fuqing Duan; Zhongke Wu; Mingquan Zhou
Journal:  Biomed Res Int       Date:  2014-07-01       Impact factor: 3.411

4.  Automated mediastinal lymph node detection from CT volumes based on intensity targeted radial structure tensor analysis.

Authors:  Hirohisa Oda; Kanwal K Bhatia; Masahiro Oda; Takayuki Kitasaka; Shingo Iwano; Hirotoshi Homma; Hirotsugu Takabatake; Masaki Mori; Hiroshi Natori; Julia A Schnabel; Kensaku Mori
Journal:  J Med Imaging (Bellingham)       Date:  2017-11-09
  4 in total

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