Literature DB >> 21744114

Positive selection of Toll-like receptor 2 polymorphisms in two closely related old world monkey species, rhesus and Japanese macaques.

Akiko Takaki1, Akiko Yamazaki, Tomoyuki Maekawa, Hiroki Shibata, Kenji Hirayama, Akinori Kimura, Hirohisa Hirai, Michio Yasunami.   

Abstract

Toll-like receptor 2 (TLR2) plays an important role in the recognition of a variety of pathogenic microbes. In the present study, we compared polymorphisms of TLR2 locus in two closely related old world monkey species, rhesus monkey (Macaca mulatta) and Japanese monkey (Macaca fuscata). By nucleotide sequencing of the third exon of TLR2 gene from 21 to 35 respective individuals, we could assign 17 haplotype combinations of 17 coding SNPs of ten non-synonymous and seven synonymous substitutions. A non-synonymous substitution at codon position 326 appeared to be differentially fixed in each species, asparagine for M. mulatta whereas tyrosine for M. fuscata, and may contribute to certain functional properties because it locates in the region contributing to ligand binding and interaction with dimerization partner of TLR2-TLR1 heterodimeric complex. Although TLR2 alleles have diverged to similar extent in both species, they have evolved in significantly different ways; TLR2 of M. fuscata has undergone purifying selection while the membrane-proximal part of the extracellular domain of M. mulatta TLR2 exhibits higher rates of non-synonymous substitutions, indicating a trace of Darwinian positive selection.

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Year:  2011        PMID: 21744114     DOI: 10.1007/s00251-011-0556-2

Source DB:  PubMed          Journal:  Immunogenetics        ISSN: 0093-7711            Impact factor:   2.846


  47 in total

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2.  Direct determination of single nucleotide polymorphism haplotype of NFKBIL1 promoter polymorphism by DNA conformation analysis and its application to association study of chronic inflammatory diseases.

Authors:  Hiroki Shibata; Michio Yasunami; Nobuhisa Obuchi; Megumi Takahashi; Yasushi Kobayashi; Fujio Numano; Akinori Kimura
Journal:  Hum Immunol       Date:  2006-05-04       Impact factor: 2.850

3.  Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

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Review 4.  A nonhuman primate model for preclinical testing of new tuberculosis vaccines.

Authors:  D N McMurray
Journal:  Clin Infect Dis       Date:  2000-06       Impact factor: 9.079

5.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

6.  Biased distribution of single nucleotide polymorphisms (SNPs) in porcine Toll-like receptor 1 (TLR1), TLR2, TLR4, TLR5, and TLR6 genes.

Authors:  Hiroki Shinkai; Maiko Tanaka; Takeya Morozumi; Tomoko Eguchi-Ogawa; Naohiko Okumura; Yoshihiro Muneta; Takashi Awata; Hirohide Uenishi
Journal:  Immunogenetics       Date:  2006-04-05       Impact factor: 2.846

7.  Positive Darwinian selection after gene duplication in primate ribonuclease genes.

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Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-31       Impact factor: 11.205

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9.  Identification of MHC class I sequences in Chinese-origin rhesus macaques.

Authors:  Julie A Karl; Roger W Wiseman; Kevin J Campbell; Alex J Blasky; Austin L Hughes; Betsy Ferguson; Daniel S Read; David H O'Connor
Journal:  Immunogenetics       Date:  2007-12-21       Impact factor: 2.846

10.  Single nucleotide polymorphisms (SNPs) distinguish Indian-origin and Chinese-origin rhesus macaques (Macaca mulatta).

Authors:  Betsy Ferguson; Summer L Street; Hollis Wright; Carlo Pearson; Yibing Jia; Shaun L Thompson; Patrick Allibone; Christopher J Dubay; Eliot Spindel; Robert B Norgren
Journal:  BMC Genomics       Date:  2007-02-07       Impact factor: 3.969

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  4 in total

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Journal:  PLoS One       Date:  2012-09-14       Impact factor: 3.240

2.  Signatures of positive selection in Toll-like receptor (TLR) genes in mammals.

Authors:  Helena Areal; Joana Abrantes; Pedro J Esteves
Journal:  BMC Evol Biol       Date:  2011-12-20       Impact factor: 3.260

3.  Rapid Expansion of Phenylthiocarbamide Non-Tasters among Japanese Macaques.

Authors:  Nami Suzuki-Hashido; Takashi Hayakawa; Atsushi Matsui; Yasuhiro Go; Yoshiro Ishimaru; Takumi Misaka; Keiko Abe; Hirohisa Hirai; Yoko Satta; Hiroo Imai
Journal:  PLoS One       Date:  2015-07-22       Impact factor: 3.240

4.  Evidence for adaptation of porcine Toll-like receptors.

Authors:  Kwame A Darfour-Oduro; Hendrik-Jan Megens; Alfred Roca; Martien A M Groenen; Lawrence B Schook
Journal:  Immunogenetics       Date:  2015-12-23       Impact factor: 2.846

  4 in total

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