Literature DB >> 21743932

Reactions of simple and peptidic alpha-carboxylate radical anions with dioxygen in the gas phase.

Tony Ly1, Benjamin B Kirk, Pramesh I Hettiarachchi, Berwyck L J Poad, Adam J Trevitt, Gabriel da Silva, Stephen J Blanksby.   

Abstract

α-Carboxylate radical anions are potential reactive intermediates in the free radical oxidation of biological molecules (e.g., fatty acids, peptides and proteins). We have synthesised well-defined α-carboxylate radical anions in the gas phase by UV laser photolysis of halogenated precursors in an ion-trap mass spectrometer. Reactions of isolated acetate (˙CH(2)CO(2)(-)) and 1-carboxylatobutyl (CH(3)CH(2)CH(2)˙CHCO(2)(-)) radical anions with dioxygen yield carbonate (CO(3)˙(-)) radical anions and this chemistry is shown to be a hallmark of oxidation in simple and alkyl-substituted cross-conjugated species. Previous solution phase studies have shown that C(α)-radicals in peptides, formed from free radical damage, combine with dioxygen to form peroxyl radicals that subsequently decompose into imine and keto acid products. Here, we demonstrate that a novel alternative pathway exists for two α-carboxylate C(α)-radical anions: the acetylglycinate radical anion (CH(3)C(O)NH˙CHCO(2)(-)) and the model peptide radical anion, YGGFG˙(-). Reaction of these radical anions with dioxygen results in concerted loss of carbon dioxide and hydroxyl radical. The reaction of the acetylglycinate radical anion with dioxygen reveals a two-stage process involving a slow, followed by a fast kinetic regime. Computational modelling suggests the reversible formation of the C(α) peroxyl radical facilitates proton transfer from the amide to the carboxylate group, a process reminiscent of, but distinctive from, classical proton-transfer catalysis. Interestingly, inclusion of this isomerization step in the RRKM/ME modelling of a G3SX level potential energy surface enables recapitulation of the experimentally observed two-stage kinetics.

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Year:  2011        PMID: 21743932     DOI: 10.1039/c1cp20784a

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  8 in total

1.  Gas-Phase Chemistry in the GC Orbitrap Mass Spectrometer.

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Journal:  J Am Soc Mass Spectrom       Date:  2018-12-19       Impact factor: 3.109

2.  Does addition of NO2 to carbon-centered radicals yield RONO or RNO2? An investigation using distonic radical ions.

Authors:  Benjamin B Kirk; Adam J Trevitt; Stephen J Blanksby
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3.  The effective temperature of ions stored in a linear quadrupole ion trap mass spectrometer.

Authors:  William A Donald; George N Khairallah; Richard A J O'Hair
Journal:  J Am Soc Mass Spectrom       Date:  2013-04-20       Impact factor: 3.109

4.  Mass spectrometry-directed structure elucidation and total synthesis of ultra-long chain (O-acyl)-ω-hydroxy fatty acids.

Authors:  Sarah E Hancock; Ramesh Ailuri; David L Marshall; Simon H J Brown; Jennifer T Saville; Venkateswara R Narreddula; Nathan R Boase; Berwyck L J Poad; Adam J Trevitt; Mark D P Willcox; Michael J Kelso; Todd W Mitchell; Stephen J Blanksby
Journal:  J Lipid Res       Date:  2018-06-15       Impact factor: 5.922

5.  UV photodissociation action spectroscopy of haloanilinium ions in a linear quadrupole ion trap mass spectrometer.

Authors:  Christopher S Hansen; Benjamin B Kirk; Stephen J Blanksby; Richard A J O'Hair; Adam J Trevitt
Journal:  J Am Soc Mass Spectrom       Date:  2013-04-23       Impact factor: 3.109

6.  A distonic radical-ion for detection of traces of adventitious molecular oxygen (O2) in collision gases used in tandem mass spectrometers.

Authors:  Freneil B Jariwala; John A Hibbs; Carl S Weisbecker; John Ressler; Rahul L Khade; Yong Zhang; Athula B Attygalle
Journal:  J Am Soc Mass Spectrom       Date:  2014-07-08       Impact factor: 3.109

7.  Comparing Positively and Negatively Charged Distonic Radical Ions in Phenylperoxyl Forming Reactions.

Authors:  Peggy E Williams; David L Marshall; Berwyck L J Poad; Venkateswara R Narreddula; Benjamin B Kirk; Adam J Trevitt; Stephen J Blanksby
Journal:  J Am Soc Mass Spectrom       Date:  2018-06-04       Impact factor: 3.109

8.  Using distonic radical ions to probe the chemistry of key combustion intermediates: the case of the benzoxyl radical anion.

Authors:  Cong Li; Adrian K Y Lam; George N Khairallah; Jonathan M White; Richard A J O'Hair; Gabriel da Silva
Journal:  J Am Soc Mass Spectrom       Date:  2013-03-20       Impact factor: 3.109

  8 in total

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