Literature DB >> 21740631

Determination of absolute configuration of chiral molecules using vibrational optical activity: a review.

Yanan He1, Bo Wang, Rina K Dukor, Laurence A Nafie.   

Abstract

Determination of the absolute handedness, known as absolute configuration (AC), of chiral molecules is an important step in any field related to chirality, especially in the pharmaceutical industry. Vibrational optical activity (VOA) has become a powerful tool for the determination of the AC of chiral molecules in the solution state after nearly forty years of evolution. VOA offers a novel alternative, or supplement, to X-ray crystallography, permitting AC determinations on neat liquid, oil, and solution samples without the need to grow single crystals of the pure chiral sample molecules as required for X-ray analysis. By comparing the sign and intensity of the measured VOA spectrum with the corresponding ab initio density functional theory (DFT) calculated VOA spectrum of a chosen configuration, one can unambiguously assign the AC of a chiral molecule. Comparing measured VOA spectra with calculated VOA spectra of all the conformers can also provide solution-state conformational populations. VOA consists of infrared vibrational circular dichroism (VCD) and vibrational Raman optical activity (ROA). Currently, VCD is used routinely by researchers in a variety of backgrounds, including molecular chirality, asymmetric synthesis, chiral catalysis, drug screening, pharmacology, and natural products. Although the application of ROA in AC determination lags behind that of VCD, with the recent implementation of ROA subroutines in commercial quantum chemistry software, ROA will in the future complement VCD for AC determination. In this review, the basic principles of the application of VCD to the determination of absolute configuration in chiral molecules are described. The steps required for VCD spectral measurement and calculation are outlined, followed by brief descriptions of recently published papers reporting the determination of AC in small organic, pharmaceutical, and natural product molecules.

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Year:  2011        PMID: 21740631     DOI: 10.1366/11-06321

Source DB:  PubMed          Journal:  Appl Spectrosc        ISSN: 0003-7028            Impact factor:   2.388


  25 in total

Review 1.  Enzyme active site interactions by Raman/FTIR, NMR, and ab initio calculations.

Authors:  Hua Deng
Journal:  Adv Protein Chem Struct Biol       Date:  2013       Impact factor: 3.507

2.  The Growing Importance of Chirality in 3D Chemical Space Exploration and Modern Drug Discovery Approaches for Hit-ID: Topical Innovations.

Authors:  Ilaria Proietti Silvestri; Paul J J Colbon
Journal:  ACS Med Chem Lett       Date:  2021-07-16       Impact factor: 4.632

3.  Generation of Axially Chiral Fluoroallenes through a Copper-Catalyzed Enantioselective β-Fluoride Elimination.

Authors:  Thomas J O'Connor; Binh Khanh Mai; Jordan Nafie; Peng Liu; F Dean Toste
Journal:  J Am Chem Soc       Date:  2021-08-16       Impact factor: 16.383

4.  Synthesis and Evaluation of the First Fluorescent Antagonists of the Human P2Y2 Receptor Based on AR-C118925.

Authors:  Sean Conroy; Nicholas D Kindon; Jacqueline Glenn; Leigh A Stoddart; Richard J Lewis; Stephen J Hill; Barrie Kellam; Michael J Stocks
Journal:  J Med Chem       Date:  2018-03-28       Impact factor: 7.446

5.  Reconciliation of chemical, enzymatic, spectroscopic and computational data to assign the absolute configuration of the DNA base lesion spiroiminodihydantoin.

Authors:  Aaron M Fleming; Anita M Orendt; Yanan He; Judy Zhu; Rina K Dukor; Cynthia J Burrows
Journal:  J Am Chem Soc       Date:  2013-11-21       Impact factor: 15.419

6.  Two rare-class tricyclic diterpenes with antitubercular activity from the Caribbean sponge Svenzea flava. Application of vibrational circular dichroism spectroscopy for determining absolute configuration.

Authors:  Edward Avilés; Abimael D Rodríguez; Jan Vicente
Journal:  J Org Chem       Date:  2013-11-05       Impact factor: 4.354

7.  Spectroscopic ruler for measuring active-site distortions based on Raman optical activity of a hydrogen out-of-plane vibration.

Authors:  Shojiro Haraguchi; Takahito Shingae; Tomotsumi Fujisawa; Noritaka Kasai; Masato Kumauchi; Takeshi Hanamoto; Wouter D Hoff; Masashi Unno
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-13       Impact factor: 11.205

8.  Structural and in Vitro Functional Characterization of a Menthyl TRPM8 Antagonist Indicates Species-Dependent Regulation.

Authors:  V Blair Journigan; David Alarcón-Alarcón; Zhiwei Feng; Yuanqiang Wang; Tianjian Liang; Denise C Dawley; A R M Ruhul Amin; Camila Montano; Wade D Van Horn; Xiang-Qun Xie; Antonio Ferrer-Montiel; Asia Fernández-Carvajal
Journal:  ACS Med Chem Lett       Date:  2021-03-31       Impact factor: 4.345

9.  Theoretical Prediction of Structures, Vibrational Circular Dichroism, and Infrared Spectra of Chiral Be4B8 Cluster at Different Temperatures.

Authors:  Carlos Emiliano Buelna-García; Eduardo Robles-Chaparro; Tristan Parra-Arellano; Jesus Manuel Quiroz-Castillo; Teresa Del-Castillo-Castro; Gerardo Martínez-Guajardo; Cesar Castillo-Quevedo; Aned de-León-Flores; Gilberto Anzueto-Sánchez; Martha Fabiola Martin-Del-Campo-Solis; Ana Maria Mendoza-Wilson; Alejandro Vásquez-Espinal; Jose Luis Cabellos
Journal:  Molecules       Date:  2021-06-28       Impact factor: 4.411

10.  Development of N-methyl-(2-arylquinolin-4-yl)oxypropanamides as leads to PET radioligands for translocator protein (18 kDa).

Authors:  Chad Brouwer; Kimberly Jenko; Sami S Zoghbi; Robert B Innis; Victor W Pike
Journal:  J Med Chem       Date:  2014-07-01       Impact factor: 7.446

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