Literature DB >> 21740153

Selection on the human bitter taste gene, TAS2R16, in Eurasian populations.

Hui Li1, Andrew J Pakstis, Judith R Kidd, Kenneth K Kidd.   

Abstract

Bitter taste is one of the most important senses alerting humans to noxious foods. In gatherer communities, sensitivity to bitterness is presumably advantageous because of various noxious plants. TAS2R16 is the gene coding the taste receptor molecules for some of the most common toxins in plants. A previous study of this gene indicated selection has increased the frequency of a derived allele in this gene that arose before the human expansion out of Africa. We have applied a different methodology for detecting selection, the Long Range Haplotype (LRH) analysis, to TAS2R16 in a larger sampling of populations from around the world. The haplotype with the derived alleles at both the functional polymorphism and a polymorphism in the regulatory region of TAS2R16 showed evidence for recent positive selection in most of the Eurasian populations, though the highest selection signal occurs in Mbuti Pygmies, an African hunter-gatherer group. In Eurasia, only populations of Mesopotamia and the southeast coast of China have no signals of selection. The evidence of recent selection found in most Eurasian populations differs from the geographic pattern seen in the earlier study of selection. One can speculate that the difference may result from a gathering lifestyle extending into the most recent 10,000 yrs and the need to recognize newly encountered bitter natural toxins as populations expanded into new environments and the biota changes with the ending of the most recent ice age. Alternatively, the promoter region variant may be a marker for altered function beyond what the derived amino acid allele conferred.

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Year:  2011        PMID: 21740153     DOI: 10.3378/027.083.0303

Source DB:  PubMed          Journal:  Hum Biol        ISSN: 0018-7143            Impact factor:   0.553


  11 in total

1.  Mini-haplotypes as lineage informative SNPs and ancestry inference SNPs.

Authors:  Andrew J Pakstis; Rixun Fang; Manohar R Furtado; Judith R Kidd; Kenneth K Kidd
Journal:  Eur J Hum Genet       Date:  2012-04-25       Impact factor: 4.246

2.  Origin and differential selection of allelic variation at TAS2R16 associated with salicin bitter taste sensitivity in Africa.

Authors:  Michael C Campbell; Alessia Ranciaro; Daniel Zinshteyn; Renata Rawlings-Goss; Jibril Hirbo; Simon Thompson; Dawit Woldemeskel; Alain Froment; Joseph B Rucker; Sabah A Omar; Jean-Marie Bodo; Thomas Nyambo; Gurja Belay; Dennis Drayna; Paul A S Breslin; Sarah A Tishkoff
Journal:  Mol Biol Evol       Date:  2013-10-30       Impact factor: 16.240

3.  ALFRED: an allele frequency resource for research and teaching.

Authors:  Haseena Rajeevan; Usha Soundararajan; Judith R Kidd; Andrew J Pakstis; Kenneth K Kidd
Journal:  Nucleic Acids Res       Date:  2011-10-28       Impact factor: 16.971

4.  A functional comparison of the domestic cat bitter receptors Tas2r38 and Tas2r43 with their human orthologs.

Authors:  Michelle M Sandau; Jason R Goodman; Anu Thomas; Joseph B Rucker; Nancy E Rawson
Journal:  BMC Neurosci       Date:  2015-06-03       Impact factor: 3.288

5.  Limited evidence for adaptive evolution and functional effect of allelic variation at rs702424 in the promoter of the TAS2R16 bitter taste receptor gene in Africa.

Authors:  Michael C Campbell; Alessia Ranciaro; Daniel Zinshteyn; Renata Rawlings-Goss; Jibril Hirbo; Simon Thompson; Dawit Woldemeskel; Alain Froment; Sabah A Omar; Jean-Marie Bodo; Thomas Nyambo; Gurja Belay; Dennis Drayna; Paul A S Breslin; Sarah A Tishkoff
Journal:  J Hum Genet       Date:  2014-05-01       Impact factor: 3.172

Review 6.  Extraoral bitter taste receptors in health and disease.

Authors:  Ping Lu; Cheng-Hai Zhang; Lawrence M Lifshitz; Ronghua ZhuGe
Journal:  J Gen Physiol       Date:  2017-01-04       Impact factor: 4.086

7.  The Bitter Taste Receptor TAS2R16 Achieves High Specificity and Accommodates Diverse Glycoside Ligands by using a Two-faced Binding Pocket.

Authors:  Anu Thomas; Chidananda Sulli; Edgar Davidson; Eli Berdougo; Morganne Phillips; Bridget A Puffer; Cheryl Paes; Benjamin J Doranz; Joseph B Rucker
Journal:  Sci Rep       Date:  2017-08-10       Impact factor: 4.379

8.  Bitter taste receptor polymorphisms and human aging.

Authors:  Daniele Campa; Francesco De Rango; Maura Carrai; Paolina Crocco; Alberto Montesanto; Federico Canzian; Giuseppina Rose; Cosmeri Rizzato; Giuseppe Passarino; Roberto Barale
Journal:  PLoS One       Date:  2012-11-02       Impact factor: 3.240

9.  Multigenic natural variation underlies Caenorhabditis elegans olfactory preference for the bacterial pathogen Serratia marcescens.

Authors:  Elizabeth E Glater; Matthew V Rockman; Cornelia I Bargmann
Journal:  G3 (Bethesda)       Date:  2014-02-19       Impact factor: 3.154

10.  Extensive Admixture and Selective Pressure Across the Sahel Belt.

Authors:  Petr Triska; Pedro Soares; Etienne Patin; Veronica Fernandes; Viktor Cerny; Luisa Pereira
Journal:  Genome Biol Evol       Date:  2015-11-26       Impact factor: 3.416

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