Literature DB >> 21736701

Protein alpha-N-acetylation studied by N-terminomics.

Petra Van Damme1, Thomas Arnesen, Kris Gevaert.   

Abstract

Cotranslational protein N-terminal modifications, including proteolytic maturation such as initiator methionine excision by methionine aminopeptidases and N-terminal blocking, occur universally. Protein alpha-N-acetylation, or the transfer of the acetyl moiety of acetyl-coenzyme A to nascent protein N-termini, catalysed by multisubunit N-terminal acetyltransferase complexes, generally takes place during protein translation. Nearly all protein modifications are known to influence different protein aspects such as folding, stability, activity and localization, and several studies have indicated similar functions for protein alpha-N-acetylation. However, until recently, protein alpha-N-acetylation remained poorly explored, mainly due to the absence of targeted proteomics technologies. The recent emergence of N-terminomics technologies that allow isolation of protein N-terminal peptides, together with proteogenomics efforts combining experimental and informational content have greatly boosted the field of alpha-N-acetylation. In this review, we report on such emerging technologies as well as on breakthroughs in our understanding of protein N-terminal biology.
© 2011 The Authors Journal compilation © 2011 FEBS.

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Year:  2011        PMID: 21736701     DOI: 10.1111/j.1742-4658.2011.08230.x

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  31 in total

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Authors:  Janos Kerner; Kwangwon Lee; Bernard Tandler; Charles L Hoppel
Journal:  Biochim Biophys Acta       Date:  2011-11-19

2.  Unbiased selective isolation of protein N-terminal peptides from complex proteome samples using phospho tagging (PTAG) and TiO(2)-based depletion.

Authors:  Geert P M Mommen; Bas van de Waterbeemd; Hugo D Meiring; Gideon Kersten; Albert J R Heck; Ad P J M de Jong
Journal:  Mol Cell Proteomics       Date:  2012-06-22       Impact factor: 5.911

3.  Identifying and quantifying proteolytic events and the natural N terminome by terminal amine isotopic labeling of substrates.

Authors:  Oded Kleifeld; Alain Doucet; Anna Prudova; Ulrich auf dem Keller; Magda Gioia; Jayachandran N Kizhakkedathu; Christopher M Overall
Journal:  Nat Protoc       Date:  2011-09-22       Impact factor: 13.491

4.  The DegraBase: a database of proteolysis in healthy and apoptotic human cells.

Authors:  Emily D Crawford; Julia E Seaman; Nick Agard; Gerald W Hsu; Olivier Julien; Sami Mahrus; Huy Nguyen; Kazutaka Shimbo; Hikari A I Yoshihara; Min Zhuang; Robert J Chalkley; James A Wells
Journal:  Mol Cell Proteomics       Date:  2012-12-20       Impact factor: 5.911

5.  N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.

Authors:  Petra Van Damme; Marta Lasa; Bogdan Polevoda; Cristina Gazquez; Alberto Elosegui-Artola; Duk Soo Kim; Elena De Juan-Pardo; Kimberly Demeyer; Kristine Hole; Esther Larrea; Evy Timmerman; Jesus Prieto; Thomas Arnesen; Fred Sherman; Kris Gevaert; Rafael Aldabe
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-18       Impact factor: 11.205

6.  Human Naa50 Protein Displays Broad Substrate Specificity for Amino-terminal Acetylation: DETAILED STRUCTURAL AND BIOCHEMICAL ANALYSIS USING TETRAPEPTIDE LIBRARY.

Authors:  Ravikumar Reddi; Venkateshwarlu Saddanapu; Dinesh Kumar Chinthapalli; Priyanka Sankoju; Prabhakar Sripadi; Anthony Addlagatta
Journal:  J Biol Chem       Date:  2016-08-02       Impact factor: 5.157

7.  Formalin-Fixed, Paraffin-Embedded Tissues (FFPE) as a Robust Source for the Profiling of Native and Protease-Generated Protein Amino Termini.

Authors:  Zon Weng Lai; Juliane Weisser; Lars Nilse; Fabrizio Costa; Eva Keller; Martina Tholen; Jayachandran N Kizhakkedathu; Martin Biniossek; Peter Bronsert; Oliver Schilling
Journal:  Mol Cell Proteomics       Date:  2016-04-17       Impact factor: 5.911

8.  Systems-level analysis of proteolytic events in increased vascular permeability and complement activation in skin inflammation.

Authors:  Ulrich auf dem Keller; Anna Prudova; Ulrich Eckhard; Barbara Fingleton; Christopher M Overall
Journal:  Sci Signal       Date:  2013-01-15       Impact factor: 8.192

Review 9.  Posttranslational Modifications of Chloroplast Proteins: An Emerging Field.

Authors:  Nina Lehtimäki; Minna M Koskela; Paula Mulo
Journal:  Plant Physiol       Date:  2015-04-24       Impact factor: 8.340

Review 10.  Exploring the accessible conformations of N-terminal acetylated α-synuclein.

Authors:  Gina M Moriarty; Maria K Janowska; Lijuan Kang; Jean Baum
Journal:  FEBS Lett       Date:  2013-03-13       Impact factor: 4.124

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